Protein–RNA interactions for Protein: Q12946

FOXF1, Forkhead box protein F1, humanhuman

Predictions only

Length 379 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1Q12946 RNU6-660P-201ENST00000364566 109 ntBASIC1.22□□□□□ -2.21
FOXF1Q12946 SNORA75B-201ENST00000384053 137 ntBASIC1.22□□□□□ -2.21
FOXF1Q12946 FTH1P15-201ENST00000406984 280 ntBASIC1.22□□□□□ -2.21
FOXF1Q12946 AL365338.1-201ENST00000422282 858 ntBASIC1.22□□□□□ -2.21
FOXF1Q12946 VN1R108P-201ENST00000431580 830 ntBASIC1.22□□□□□ -2.21
FOXF1Q12946 MTND2P29-201ENST00000438595 412 ntBASIC1.22□□□□□ -2.21
FOXF1Q12946 MTND6P13-201ENST00000443510 523 ntBASIC1.22□□□□□ -2.21
FOXF1Q12946 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.22□□□□□ -2.21
FOXF1Q12946 AC009474.2-201ENST00000451383 136 ntBASIC1.22□□□□□ -2.21
FOXF1Q12946 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
FOXF1Q12946 RNU1-123P-201ENST00000458950 160 ntBASIC1.22□□□□□ -2.21
FOXF1Q12946 MED28P2-201ENST00000475771 317 ntBASIC1.22□□□□□ -2.21
FOXF1Q12946 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.22□□□□□ -2.21
FOXF1Q12946 AC011005.2-201ENST00000487324 359 ntBASIC1.22□□□□□ -2.21
FOXF1Q12946 MTCYBP18-201ENST00000501056 747 ntBASIC1.22□□□□□ -2.21
FOXF1Q12946 AC116347.2-201ENST00000514912 523 ntBASIC1.22□□□□□ -2.21
FOXF1Q12946 SNORA4.4-201ENST00000515921 135 ntBASIC1.22□□□□□ -2.21
FOXF1Q12946 RNA5SP337-201ENST00000517007 109 ntBASIC1.22□□□□□ -2.21
FOXF1Q12946 MRPS36P3-201ENST00000519284 130 ntBASIC1.22□□□□□ -2.21
FOXF1Q12946 NDUFA5P6-201ENST00000542110 379 ntBASIC1.22□□□□□ -2.21
FOXF1Q12946 AC233702.2-202ENST00000562547 291 ntBASIC1.22□□□□□ -2.21
FOXF1Q12946 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.22□□□□□ -2.21
FOXF1Q12946 MIR4285-201ENST00000581001 85 ntBASIC1.22□□□□□ -2.21
FOXF1Q12946 AL031775.1-201ENST00000607014 887 ntBASIC1.22□□□□□ -2.21
FOXF1Q12946 AC098614.4-201ENST00000607601 462 ntBASIC1.22□□□□□ -2.21
FOXF1Q12946 AL355816.2-201ENST00000610049 647 ntBASIC1.22□□□□□ -2.21
FOXF1Q12946 AC130324.3-201ENST00000614165 542 ntBASIC1.22□□□□□ -2.21
FOXF1Q12946 MIR7844-201ENST00000616161 122 ntBASIC1.22□□□□□ -2.21
FOXF1Q12946 AC104010.1-201ENST00000616889 150 ntBASIC1.22□□□□□ -2.21
FOXF1Q12946 AC022960.3-201ENST00000619794 441 ntBASIC1.22□□□□□ -2.21
FOXF1Q12946 USP12-203ENST00000620323 349 ntTSL 3 BASIC1.22□□□□□ -2.21
FOXF1Q12946 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.22□□□□□ -2.21
FOXF1Q12946 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC1.22□□□□□ -2.21
FOXF1Q12946 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.22□□□□□ -2.21
FOXF1Q12946 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
FOXF1Q12946 ANKRD36BP1-202ENST00000604892 1417 ntBASIC1.22□□□□□ -2.21
FOXF1Q12946 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC1.21□□□□□ -2.21
FOXF1Q12946 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
FOXF1Q12946 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
FOXF1Q12946 MIR378A-201ENST00000362177 66 ntBASIC1.21□□□□□ -2.22
FOXF1Q12946 RNA5SP276-201ENST00000362580 94 ntBASIC1.21□□□□□ -2.22
FOXF1Q12946 RNU6-942P-201ENST00000363002 107 ntBASIC1.21□□□□□ -2.22
FOXF1Q12946 SNORD114-19-201ENST00000363072 75 ntBASIC1.21□□□□□ -2.22
FOXF1Q12946 RNU6-533P-201ENST00000384144 107 ntBASIC1.21□□□□□ -2.22
FOXF1Q12946 RNU5A-2P-201ENST00000384337 116 ntBASIC1.21□□□□□ -2.22
FOXF1Q12946 RNU6-809P-201ENST00000384461 107 ntBASIC1.21□□□□□ -2.22
FOXF1Q12946 RNU1-57P-201ENST00000384491 166 ntBASIC1.21□□□□□ -2.22
FOXF1Q12946 MIR518A2-201ENST00000384966 87 ntBASIC1.21□□□□□ -2.22
FOXF1Q12946 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.21□□□□□ -2.22
FOXF1Q12946 Y_RNA.623-201ENST00000411128 95 ntBASIC1.21□□□□□ -2.22
FOXF1Q12946 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.21□□□□□ -2.22
FOXF1Q12946 AC009518.2-201ENST00000418056 731 ntBASIC1.21□□□□□ -2.22
FOXF1Q12946 BTF3P4-201ENST00000418852 495 ntBASIC1.21□□□□□ -2.22
FOXF1Q12946 AC244636.1-201ENST00000421152 228 ntBASIC1.21□□□□□ -2.22
FOXF1Q12946 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC1.21□□□□□ -2.22
FOXF1Q12946 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.21□□□□□ -2.22
FOXF1Q12946 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.21□□□□□ -2.22
FOXF1Q12946 AL365184.2-201ENST00000431139 435 ntBASIC1.21□□□□□ -2.22
FOXF1Q12946 snoU13.14-201ENST00000459372 104 ntBASIC1.21□□□□□ -2.22
FOXF1Q12946 AC112771.1-201ENST00000463581 102 ntBASIC1.21□□□□□ -2.22
FOXF1Q12946 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC1.21□□□□□ -2.22
FOXF1Q12946 AC004223.1-201ENST00000479840 271 ntBASIC1.21□□□□□ -2.22
FOXF1Q12946 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.21□□□□□ -2.22
FOXF1Q12946 TPT1P8-201ENST00000510120 555 ntBASIC1.21□□□□□ -2.22
FOXF1Q12946 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC1.21□□□□□ -2.22
FOXF1Q12946 RNU6-991P-201ENST00000516168 107 ntBASIC1.21□□□□□ -2.22
FOXF1Q12946 MTND4LP18-201ENST00000526864 291 ntBASIC1.21□□□□□ -2.22
FOXF1Q12946 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.21□□□□□ -2.22
FOXF1Q12946 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC1.21□□□□□ -2.22
FOXF1Q12946 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC1.21□□□□□ -2.22
FOXF1Q12946 CR383656.8-201ENST00000549046 145 ntBASIC1.21□□□□□ -2.22
FOXF1Q12946 BNIP3P39-201ENST00000601077 554 ntBASIC1.21□□□□□ -2.22
FOXF1Q12946 AL078605.1-201ENST00000603529 500 ntBASIC1.21□□□□□ -2.22
FOXF1Q12946 SNRPGP17-201ENST00000603780 214 ntBASIC1.21□□□□□ -2.22
FOXF1Q12946 AC018638.7-201ENST00000605836 1114 ntBASIC1.21□□□□□ -2.22
FOXF1Q12946 RNU6-87P-201ENST00000607561 108 ntBASIC1.21□□□□□ -2.22
FOXF1Q12946 AL451064.1-201ENST00000607718 471 ntBASIC1.21□□□□□ -2.22
FOXF1Q12946 AL136370.1-201ENST00000608166 691 ntBASIC1.21□□□□□ -2.22
FOXF1Q12946 AC068787.1-201ENST00000623908 691 ntBASIC1.21□□□□□ -2.22
FOXF1Q12946 SCARNA4-202ENST00000625402 129 ntBASIC1.21□□□□□ -2.22
FOXF1Q12946 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.21□□□□□ -2.22
FOXF1Q12946 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.21□□□□□ -2.22
FOXF1Q12946 ATM-230ENST00000640388 578 ntTSL 5 BASIC1.21□□□□□ -2.22
FOXF1Q12946 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.21□□□□□ -2.22
FOXF1Q12946 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
FOXF1Q12946 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC1.21□□□□□ -2.22
FOXF1Q12946 RNU6-72P-201ENST00000384285 79 ntBASIC1.2□□□□□ -2.22
FOXF1Q12946 AC092809.3-201ENST00000415453 231 ntBASIC1.2□□□□□ -2.22
FOXF1Q12946 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.2□□□□□ -2.22
FOXF1Q12946 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.2□□□□□ -2.22
FOXF1Q12946 MED13P1-201ENST00000428342 171 ntBASIC1.2□□□□□ -2.22
FOXF1Q12946 RPL23AP30-201ENST00000432419 501 ntBASIC1.2□□□□□ -2.22
FOXF1Q12946 MTCO3P5-201ENST00000433620 714 ntBASIC1.2□□□□□ -2.22
FOXF1Q12946 MTCYBP39-201ENST00000437562 491 ntBASIC1.2□□□□□ -2.22
FOXF1Q12946 AL512286.1-201ENST00000439244 400 ntBASIC1.2□□□□□ -2.22
FOXF1Q12946 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.2□□□□□ -2.22
FOXF1Q12946 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.2□□□□□ -2.22
FOXF1Q12946 AC006026.2-201ENST00000457376 180 ntBASIC1.2□□□□□ -2.22
FOXF1Q12946 AC018868.1-201ENST00000491307 315 ntBASIC1.2□□□□□ -2.22
FOXF1Q12946 SNORA25.11-201ENST00000515935 105 ntBASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms