Protein–RNA interactions for Protein: Q07065

CKAP4, Cytoskeleton-associated protein 4, humanhuman

Known RBP Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4Q07065 AP000907.4-201ENST00000604143 237 ntBASIC2.08□□□□□ -2.08
CKAP4Q07065 AL033523.1-201ENST00000605153 153 ntBASIC2.08□□□□□ -2.08
CKAP4Q07065 AC008945.2-201ENST00000606056 604 ntBASIC2.08□□□□□ -2.08
CKAP4Q07065 MIR92B-201ENST00000607575 96 ntBASIC2.08□□□□□ -2.08
CKAP4Q07065 AC022893.3-201ENST00000607665 437 ntBASIC2.08□□□□□ -2.08
CKAP4Q07065 AC130324.3-201ENST00000614165 542 ntBASIC2.08□□□□□ -2.08
CKAP4Q07065 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.08□□□□□ -2.08
CKAP4Q07065 AL354685.2-201ENST00000448218 1447 ntBASIC2.08□□□□□ -2.08
CKAP4Q07065 ZNF658B-202ENST00000615961 3375 ntBASIC2.07□□□□□ -2.08
CKAP4Q07065 AL049641.1-201ENST00000441055 1948 ntBASIC2.07□□□□□ -2.08
CKAP4Q07065 SNORA3A-201ENST00000364113 130 ntBASIC2.07□□□□□ -2.08
CKAP4Q07065 Y_RNA.295-201ENST00000364918 102 ntBASIC2.07□□□□□ -2.08
CKAP4Q07065 SNORA6-201ENST00000384033 151 ntBASIC2.07□□□□□ -2.08
CKAP4Q07065 MIR325-201ENST00000385260 98 ntBASIC2.07□□□□□ -2.08
CKAP4Q07065 RNU6-550P-201ENST00000391057 101 ntBASIC2.07□□□□□ -2.08
CKAP4Q07065 AL139156.1-201ENST00000412785 841 ntBASIC2.07□□□□□ -2.08
CKAP4Q07065 USP9YP6-201ENST00000413550 854 ntBASIC2.07□□□□□ -2.08
CKAP4Q07065 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.07□□□□□ -2.08
CKAP4Q07065 OR6C66P-201ENST00000414917 930 ntBASIC2.07□□□□□ -2.08
CKAP4Q07065 HMGN2P19-201ENST00000425149 265 ntBASIC2.07□□□□□ -2.08
CKAP4Q07065 Z82210.1-201ENST00000440037 231 ntBASIC2.07□□□□□ -2.08
CKAP4Q07065 CALM1P1-201ENST00000442082 433 ntBASIC2.07□□□□□ -2.08
CKAP4Q07065 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC2.07□□□□□ -2.08
CKAP4Q07065 FABP5P15-201ENST00000453566 214 ntBASIC2.07□□□□□ -2.08
CKAP4Q07065 RNU7-180P-201ENST00000459240 63 ntBASIC2.07□□□□□ -2.08
CKAP4Q07065 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC2.07□□□□□ -2.08
CKAP4Q07065 RNA5SP401-201ENST00000515920 127 ntBASIC2.07□□□□□ -2.08
CKAP4Q07065 RNU6-914P-201ENST00000516749 109 ntBASIC2.07□□□□□ -2.08
CKAP4Q07065 SNORD60.2-201ENST00000516883 86 ntBASIC2.07□□□□□ -2.08
CKAP4Q07065 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.07□□□□□ -2.08
CKAP4Q07065 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC2.07□□□□□ -2.08
CKAP4Q07065 ADI1P3-201ENST00000549509 470 ntBASIC2.07□□□□□ -2.08
CKAP4Q07065 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC2.07□□□□□ -2.08
CKAP4Q07065 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC2.07□□□□□ -2.08
CKAP4Q07065 HIF1AP1-201ENST00000553642 175 ntBASIC2.07□□□□□ -2.08
CKAP4Q07065 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.07□□□□□ -2.08
CKAP4Q07065 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.07□□□□□ -2.08
CKAP4Q07065 AC136601.2-201ENST00000604356 474 ntBASIC2.07□□□□□ -2.08
CKAP4Q07065 MIR15A-201ENST00000607334 83 ntBASIC2.07□□□□□ -2.08
CKAP4Q07065 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
CKAP4Q07065 AC010378.1-201ENST00000619270 362 ntBASIC2.07□□□□□ -2.08
CKAP4Q07065 AC024940.5-201ENST00000622889 474 ntBASIC2.07□□□□□ -2.08
CKAP4Q07065 MIR203B-201ENST00000636080 86 ntBASIC2.07□□□□□ -2.08
CKAP4Q07065 U6.114-201ENST00000636407 96 ntBASIC2.07□□□□□ -2.08
CKAP4Q07065 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.07□□□□□ -2.08
CKAP4Q07065 MIR514A2-201ENST00000385131 88 ntBASIC2.06□□□□□ -2.08
CKAP4Q07065 MIR514A3-201ENST00000385132 88 ntBASIC2.06□□□□□ -2.08
CKAP4Q07065 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
CKAP4Q07065 FGF7P8-201ENST00000402994 292 ntBASIC2.06□□□□□ -2.08
CKAP4Q07065 U3.40-201ENST00000408706 208 ntBASIC2.06□□□□□ -2.08
CKAP4Q07065 RNU4-46P-201ENST00000410818 138 ntBASIC2.06□□□□□ -2.08
CKAP4Q07065 RNU6-1068P-201ENST00000410958 103 ntBASIC2.06□□□□□ -2.08
CKAP4Q07065 EEF1A1P40-201ENST00000412883 573 ntBASIC2.06□□□□□ -2.08
CKAP4Q07065 AL451062.2-201ENST00000427515 271 ntBASIC2.06□□□□□ -2.08
CKAP4Q07065 MTCO3P18-201ENST00000440206 761 ntBASIC2.06□□□□□ -2.08
CKAP4Q07065 PIGFP3-201ENST00000441918 722 ntBASIC2.06□□□□□ -2.08
CKAP4Q07065 TRAPPC2P3-201ENST00000443200 321 ntBASIC2.06□□□□□ -2.08
CKAP4Q07065 HIGD1AP2-201ENST00000446367 280 ntBASIC2.06□□□□□ -2.08
CKAP4Q07065 FABP5P13-201ENST00000452144 328 ntBASIC2.06□□□□□ -2.08
CKAP4Q07065 AC069439.1-201ENST00000494739 167 ntBASIC2.06□□□□□ -2.08
CKAP4Q07065 RPL38P4-201ENST00000502376 214 ntBASIC2.06□□□□□ -2.08
CKAP4Q07065 SUMO2P6-201ENST00000505273 288 ntBASIC2.06□□□□□ -2.08
CKAP4Q07065 SCARNA11.3-201ENST00000517276 130 ntBASIC2.06□□□□□ -2.08
CKAP4Q07065 IGKV3-31-201ENST00000523109 329 ntBASIC2.06□□□□□ -2.08
CKAP4Q07065 RANP3-201ENST00000530970 276 ntBASIC2.06□□□□□ -2.08
CKAP4Q07065 AL133241.1-201ENST00000556832 487 ntBASIC2.06□□□□□ -2.08
CKAP4Q07065 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC2.06□□□□□ -2.08
CKAP4Q07065 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.06□□□□□ -2.08
CKAP4Q07065 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC2.06□□□□□ -2.08
CKAP4Q07065 RMST_3.1-201ENST00000611651 109 ntBASIC2.06□□□□□ -2.08
CKAP4Q07065 AC135507.2-201ENST00000612443 309 ntBASIC2.06□□□□□ -2.08
CKAP4Q07065 DISC2.1-201ENST00000612827 205 ntBASIC2.06□□□□□ -2.08
CKAP4Q07065 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.06□□□□□ -2.08
CKAP4Q07065 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.05□□□□□ -2.08
CKAP4Q07065 HSPA8P4-201ENST00000511877 1920 ntBASIC2.05□□□□□ -2.08
CKAP4Q07065 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
CKAP4Q07065 RNU6-1287P-201ENST00000362914 107 ntBASIC2.05□□□□□ -2.08
CKAP4Q07065 RNU6-512P-201ENST00000364438 103 ntBASIC2.05□□□□□ -2.08
CKAP4Q07065 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC2.05□□□□□ -2.08
CKAP4Q07065 RNU6-877P-201ENST00000383868 107 ntBASIC2.05□□□□□ -2.08
CKAP4Q07065 RNU6-217P-201ENST00000384164 104 ntBASIC2.05□□□□□ -2.08
CKAP4Q07065 RNU6-1060P-201ENST00000384664 107 ntBASIC2.05□□□□□ -2.08
CKAP4Q07065 SNORA48.2-201ENST00000390926 124 ntBASIC2.05□□□□□ -2.08
CKAP4Q07065 AL355497.1-201ENST00000406262 551 ntBASIC2.05□□□□□ -2.08
CKAP4Q07065 AL030996.1-201ENST00000411430 235 ntBASIC2.05□□□□□ -2.08
CKAP4Q07065 OR9R1P-201ENST00000412200 877 ntBASIC2.05□□□□□ -2.08
CKAP4Q07065 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC2.05□□□□□ -2.08
CKAP4Q07065 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.05□□□□□ -2.08
CKAP4Q07065 AL160275.3-201ENST00000423876 471 ntBASIC2.05□□□□□ -2.08
CKAP4Q07065 AC007560.1-201ENST00000426912 237 ntBASIC2.05□□□□□ -2.08
CKAP4Q07065 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.05□□□□□ -2.08
CKAP4Q07065 RPL36AP53-201ENST00000432891 316 ntBASIC2.05□□□□□ -2.08
CKAP4Q07065 MTND4P25-201ENST00000441039 533 ntBASIC2.05□□□□□ -2.08
CKAP4Q07065 IPO7P1-201ENST00000442031 636 ntBASIC2.05□□□□□ -2.08
CKAP4Q07065 AC104058.1-201ENST00000448028 297 ntBASIC2.05□□□□□ -2.08
CKAP4Q07065 NFU1P2-201ENST00000448700 469 ntBASIC2.05□□□□□ -2.08
CKAP4Q07065 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC2.05□□□□□ -2.08
CKAP4Q07065 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.05□□□□□ -2.08
CKAP4Q07065 MTCO3P9-201ENST00000506989 781 ntBASIC2.05□□□□□ -2.08
CKAP4Q07065 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms