Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 AC138627.2-201ENST00000624202 601 ntBASIC1.81□□□□□ -2.12
HMGCS1Q01581 AP003400.5-201ENST00000624827 617 ntBASIC1.81□□□□□ -2.12
HMGCS1Q01581 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.81□□□□□ -2.12
HMGCS1Q01581 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.81□□□□□ -2.12
HMGCS1Q01581 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.8□□□□□ -2.12
HMGCS1Q01581 Z75746.1-201ENST00000440243 2080 ntBASIC1.8□□□□□ -2.12
HMGCS1Q01581 SNORA62.1-201ENST00000364287 154 ntBASIC1.8□□□□□ -2.12
HMGCS1Q01581 SNORD14B-201ENST00000364533 90 ntBASIC1.8□□□□□ -2.12
HMGCS1Q01581 RNU6-384P-201ENST00000364900 104 ntBASIC1.8□□□□□ -2.12
HMGCS1Q01581 RPL21P90-201ENST00000415692 466 ntBASIC1.8□□□□□ -2.12
HMGCS1Q01581 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC1.8□□□□□ -2.12
HMGCS1Q01581 AC090960.1-201ENST00000421072 306 ntBASIC1.8□□□□□ -2.12
HMGCS1Q01581 MTCYBP5-201ENST00000423752 1135 ntBASIC1.8□□□□□ -2.12
HMGCS1Q01581 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC1.8□□□□□ -2.12
HMGCS1Q01581 MTCO3P5-201ENST00000433620 714 ntBASIC1.8□□□□□ -2.12
HMGCS1Q01581 GPR143P-201ENST00000434155 205 ntBASIC1.8□□□□□ -2.12
HMGCS1Q01581 MTND2P4-201ENST00000445034 1004 ntBASIC1.8□□□□□ -2.12
HMGCS1Q01581 AC079448.1-201ENST00000449377 373 ntBASIC1.8□□□□□ -2.12
HMGCS1Q01581 UBL5P3-201ENST00000475112 231 ntBASIC1.8□□□□□ -2.12
HMGCS1Q01581 AC104806.1-201ENST00000508720 308 ntBASIC1.8□□□□□ -2.12
HMGCS1Q01581 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC1.8□□□□□ -2.12
HMGCS1Q01581 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC1.8□□□□□ -2.12
HMGCS1Q01581 RNA5SP112-201ENST00000515937 99 ntBASIC1.8□□□□□ -2.12
HMGCS1Q01581 RNU1-86P-201ENST00000516108 154 ntBASIC1.8□□□□□ -2.12
HMGCS1Q01581 RNU1-107P-201ENST00000516617 154 ntBASIC1.8□□□□□ -2.12
HMGCS1Q01581 Y_RNA.695-201ENST00000516715 107 ntBASIC1.8□□□□□ -2.12
HMGCS1Q01581 RNU6-410P-201ENST00000517006 107 ntBASIC1.8□□□□□ -2.12
HMGCS1Q01581 RNU2-19P-201ENST00000517288 84 ntBASIC1.8□□□□□ -2.12
HMGCS1Q01581 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC1.8□□□□□ -2.12
HMGCS1Q01581 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.8□□□□□ -2.12
HMGCS1Q01581 MIR4448-201ENST00000584360 86 ntBASIC1.8□□□□□ -2.12
HMGCS1Q01581 AC119751.7-201ENST00000600494 245 ntBASIC1.8□□□□□ -2.12
HMGCS1Q01581 AL109918.3-201ENST00000603072 338 ntBASIC1.8□□□□□ -2.12
HMGCS1Q01581 AC245014.2-201ENST00000603689 287 ntBASIC1.8□□□□□ -2.12
HMGCS1Q01581 AL670379.10-201ENST00000604330 253 ntBASIC1.8□□□□□ -2.12
HMGCS1Q01581 AC246785.4-201ENST00000605374 287 ntBASIC1.8□□□□□ -2.12
HMGCS1Q01581 AL670379.9-201ENST00000605428 253 ntBASIC1.8□□□□□ -2.12
HMGCS1Q01581 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC1.8□□□□□ -2.12
HMGCS1Q01581 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.8□□□□□ -2.12
HMGCS1Q01581 U6.42-201ENST00000618440 107 ntBASIC1.8□□□□□ -2.12
HMGCS1Q01581 AC024581.2-201ENST00000619986 252 ntBASIC1.8□□□□□ -2.12
HMGCS1Q01581 AC138649.3-201ENST00000622154 254 ntBASIC1.8□□□□□ -2.12
HMGCS1Q01581 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.8□□□□□ -2.12
HMGCS1Q01581 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.8□□□□□ -2.12
HMGCS1Q01581 MIR3974-201ENST00000637126 96 ntBASIC1.8□□□□□ -2.12
HMGCS1Q01581 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
HMGCS1Q01581 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
HMGCS1Q01581 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
HMGCS1Q01581 RNU6-858P-201ENST00000362436 107 ntBASIC1.79□□□□□ -2.12
HMGCS1Q01581 RNU1-72P-201ENST00000362976 153 ntBASIC1.79□□□□□ -2.12
HMGCS1Q01581 RNU6-942P-201ENST00000363002 107 ntBASIC1.79□□□□□ -2.12
HMGCS1Q01581 SNORA16.1-201ENST00000364597 132 ntBASIC1.79□□□□□ -2.12
HMGCS1Q01581 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
HMGCS1Q01581 RNU6-116P-201ENST00000384042 109 ntBASIC1.79□□□□□ -2.12
HMGCS1Q01581 RNU6-348P-201ENST00000384386 107 ntBASIC1.79□□□□□ -2.12
HMGCS1Q01581 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.79□□□□□ -2.12
HMGCS1Q01581 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.79□□□□□ -2.12
HMGCS1Q01581 AC097463.2-201ENST00000421074 142 ntBASIC1.79□□□□□ -2.12
HMGCS1Q01581 PGBD4P6-201ENST00000421501 610 ntBASIC1.79□□□□□ -2.12
HMGCS1Q01581 AL627311.1-201ENST00000431514 115 ntBASIC1.79□□□□□ -2.12
HMGCS1Q01581 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.79□□□□□ -2.12
HMGCS1Q01581 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC1.79□□□□□ -2.12
HMGCS1Q01581 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC1.79□□□□□ -2.12
HMGCS1Q01581 NDUFB1P2-201ENST00000449477 176 ntBASIC1.79□□□□□ -2.12
HMGCS1Q01581 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.79□□□□□ -2.12
HMGCS1Q01581 AC098826.2-201ENST00000452011 651 ntBASIC1.79□□□□□ -2.12
HMGCS1Q01581 AL162395.1-201ENST00000457882 422 ntBASIC1.79□□□□□ -2.12
HMGCS1Q01581 snoU13.15-201ENST00000459407 104 ntBASIC1.79□□□□□ -2.12
HMGCS1Q01581 RPL7P43-201ENST00000478876 753 ntBASIC1.79□□□□□ -2.12
HMGCS1Q01581 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1.79□□□□□ -2.12
HMGCS1Q01581 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC1.79□□□□□ -2.12
HMGCS1Q01581 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC1.79□□□□□ -2.12
HMGCS1Q01581 AC008526.1-201ENST00000509149 338 ntBASIC1.79□□□□□ -2.12
HMGCS1Q01581 AC010486.3-201ENST00000511602 785 ntBASIC1.79□□□□□ -2.12
HMGCS1Q01581 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.79□□□□□ -2.12
HMGCS1Q01581 AP003072.2-201ENST00000527756 676 ntBASIC1.79□□□□□ -2.12
HMGCS1Q01581 AP000873.5-201ENST00000533906 236 ntBASIC1.79□□□□□ -2.12
HMGCS1Q01581 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.79□□□□□ -2.12
HMGCS1Q01581 MTCYBP33-201ENST00000575007 1130 ntBASIC1.79□□□□□ -2.12
HMGCS1Q01581 MIR4298-201ENST00000584380 73 ntBASIC1.79□□□□□ -2.12
HMGCS1Q01581 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC1.79□□□□□ -2.12
HMGCS1Q01581 AC025811.1-201ENST00000604312 472 ntBASIC1.79□□□□□ -2.12
HMGCS1Q01581 AL138963.2-201ENST00000605137 226 ntBASIC1.79□□□□□ -2.12
HMGCS1Q01581 AC008147.4-201ENST00000617570 1204 ntBASIC1.79□□□□□ -2.12
HMGCS1Q01581 Z69908.1-201ENST00000622603 247 ntBASIC1.79□□□□□ -2.12
HMGCS1Q01581 AC011155.2-201ENST00000623202 216 ntBASIC1.79□□□□□ -2.12
HMGCS1Q01581 AC092656.1-203ENST00000624134 423 ntBASIC1.79□□□□□ -2.12
HMGCS1Q01581 AC091932.3-201ENST00000624223 323 ntBASIC1.79□□□□□ -2.12
HMGCS1Q01581 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.79□□□□□ -2.12
HMGCS1Q01581 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
HMGCS1Q01581 MTND5P17-201ENST00000418405 1603 ntBASIC1.78□□□□□ -2.12
HMGCS1Q01581 RNU6-181P-201ENST00000363225 107 ntBASIC1.78□□□□□ -2.12
HMGCS1Q01581 RNU6-108P-201ENST00000365558 107 ntBASIC1.78□□□□□ -2.12
HMGCS1Q01581 RNU6-72P-201ENST00000384285 79 ntBASIC1.78□□□□□ -2.12
HMGCS1Q01581 RNU6-1140P-201ENST00000410517 106 ntBASIC1.78□□□□□ -2.12
HMGCS1Q01581 RNU2-40P-201ENST00000410833 196 ntBASIC1.78□□□□□ -2.12
HMGCS1Q01581 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.78□□□□□ -2.12
HMGCS1Q01581 HMGN2P19-201ENST00000425149 265 ntBASIC1.78□□□□□ -2.12
HMGCS1Q01581 AL358934.1-201ENST00000432346 324 ntBASIC1.78□□□□□ -2.12
HMGCS1Q01581 AL121890.1-201ENST00000435457 205 ntBASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms