Protein–RNA interactions for Protein: Q01118

SCN7A, Sodium channel protein type 7 subunit alpha, humanhuman

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN7AQ01118 MIR302D-201ENST00000362275 68 ntBASIC0.31□□□□□ -2.36
SCN7AQ01118 SNORA48.1-201ENST00000390879 135 ntBASIC0.31□□□□□ -2.36
SCN7AQ01118 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.31□□□□□ -2.36
SCN7AQ01118 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC0.31□□□□□ -2.36
SCN7AQ01118 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
SCN7AQ01118 MTND1P16-201ENST00000465177 898 ntBASIC0.31□□□□□ -2.36
SCN7AQ01118 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC0.31□□□□□ -2.36
SCN7AQ01118 RNU6-703P-201ENST00000516946 107 ntBASIC0.31□□□□□ -2.36
SCN7AQ01118 RNU6-667P-201ENST00000517186 102 ntBASIC0.31□□□□□ -2.36
SCN7AQ01118 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC0.31□□□□□ -2.36
SCN7AQ01118 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC0.31□□□□□ -2.36
SCN7AQ01118 AC017037.3-201ENST00000625016 472 ntBASIC0.31□□□□□ -2.36
SCN7AQ01118 C8orf59P1-201ENST00000429930 303 ntBASIC0.3□□□□□ -2.36
SCN7AQ01118 PTGES3P1-201ENST00000439531 483 ntBASIC0.3□□□□□ -2.36
SCN7AQ01118 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC0.3□□□□□ -2.36
SCN7AQ01118 RNU6-586P-201ENST00000517265 104 ntBASIC0.3□□□□□ -2.36
SCN7AQ01118 MIR4636-201ENST00000582271 80 ntBASIC0.3□□□□□ -2.36
SCN7AQ01118 NDUFA8P1-201ENST00000605525 367 ntBASIC0.3□□□□□ -2.36
SCN7AQ01118 AL355802.4-201ENST00000607635 548 ntBASIC0.3□□□□□ -2.36
SCN7AQ01118 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC0.3□□□□□ -2.36
SCN7AQ01118 RNU6-1280P-201ENST00000365211 107 ntBASIC0.3□□□□□ -2.36
SCN7AQ01118 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC0.3□□□□□ -2.36
SCN7AQ01118 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC0.3□□□□□ -2.36
SCN7AQ01118 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC0.3□□□□□ -2.36
SCN7AQ01118 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.3□□□□□ -2.36
SCN7AQ01118 RPL31P3-201ENST00000458430 332 ntBASIC0.3□□□□□ -2.36
SCN7AQ01118 RNU4-54P-201ENST00000516428 129 ntBASIC0.3□□□□□ -2.36
SCN7AQ01118 RNU6-528P-201ENST00000516926 100 ntBASIC0.3□□□□□ -2.36
SCN7AQ01118 RNA5SP290-201ENST00000517133 127 ntBASIC0.3□□□□□ -2.36
SCN7AQ01118 AC022616.8-201ENST00000533569 253 ntBASIC0.3□□□□□ -2.36
SCN7AQ01118 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC0.3□□□□□ -2.36
SCN7AQ01118 AC095057.3-201ENST00000567102 1157 ntBASIC0.3□□□□□ -2.36
SCN7AQ01118 BNIP3P27-201ENST00000599991 412 ntBASIC0.3□□□□□ -2.36
SCN7AQ01118 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC0.3□□□□□ -2.36
SCN7AQ01118 AC126177.8-201ENST00000618339 1015 ntBASIC0.3□□□□□ -2.36
SCN7AQ01118 RNU6-673P-201ENST00000365084 104 ntBASIC0.29□□□□□ -2.36
SCN7AQ01118 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC0.29□□□□□ -2.36
SCN7AQ01118 TIMM9P1-201ENST00000436122 256 ntBASIC0.29□□□□□ -2.36
SCN7AQ01118 RNA5SP269-201ENST00000459032 137 ntBASIC0.29□□□□□ -2.36
SCN7AQ01118 RNVU1-2-201ENST00000516326 135 ntBASIC0.29□□□□□ -2.36
SCN7AQ01118 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
SCN7AQ01118 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC0.29□□□□□ -2.36
SCN7AQ01118 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC0.29□□□□□ -2.36
SCN7AQ01118 5S_rRNA.11-201ENST00000618635 84 ntBASIC0.29□□□□□ -2.36
SCN7AQ01118 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.29□□□□□ -2.36
SCN7AQ01118 SNORD114-19-201ENST00000363072 75 ntBASIC0.28□□□□□ -2.36
SCN7AQ01118 Y_RNA.245-201ENST00000364493 95 ntBASIC0.28□□□□□ -2.36
SCN7AQ01118 SNORA2A-201ENST00000383885 135 ntBASIC0.28□□□□□ -2.36
SCN7AQ01118 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC0.28□□□□□ -2.36
SCN7AQ01118 AL606489.2-201ENST00000433886 234 ntBASIC0.28□□□□□ -2.36
SCN7AQ01118 MTND4P6-201ENST00000438297 472 ntBASIC0.28□□□□□ -2.36
SCN7AQ01118 HSPE1P9-201ENST00000440046 311 ntBASIC0.28□□□□□ -2.36
SCN7AQ01118 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC0.28□□□□□ -2.36
SCN7AQ01118 RNU6-333P-201ENST00000459117 107 ntBASIC0.28□□□□□ -2.36
SCN7AQ01118 COX6CP6-201ENST00000490840 228 ntBASIC0.28□□□□□ -2.36
SCN7AQ01118 RNU6-581P-201ENST00000516214 105 ntBASIC0.28□□□□□ -2.36
SCN7AQ01118 RNU4-77P-201ENST00000516692 156 ntBASIC0.28□□□□□ -2.36
SCN7AQ01118 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC0.28□□□□□ -2.36
SCN7AQ01118 AL671309.1-201ENST00000603750 544 ntBASIC0.28□□□□□ -2.36
SCN7AQ01118 AC009237.15-201ENST00000610252 501 ntBASIC0.28□□□□□ -2.36
SCN7AQ01118 AL138726.1-201ENST00000614873 333 ntBASIC0.28□□□□□ -2.36
SCN7AQ01118 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
SCN7AQ01118 RNU6-112P-201ENST00000363599 104 ntBASIC0.27□□□□□ -2.37
SCN7AQ01118 RNU6-878P-201ENST00000384578 110 ntBASIC0.27□□□□□ -2.37
SCN7AQ01118 RPL26P27-201ENST00000414397 437 ntBASIC0.27□□□□□ -2.37
SCN7AQ01118 TAF13P2-201ENST00000416876 286 ntBASIC0.27□□□□□ -2.37
SCN7AQ01118 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC0.27□□□□□ -2.37
SCN7AQ01118 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC0.27□□□□□ -2.37
SCN7AQ01118 SNX2P2-201ENST00000424553 323 ntBASIC0.27□□□□□ -2.37
SCN7AQ01118 RPS25P9-201ENST00000435591 252 ntBASIC0.27□□□□□ -2.37
SCN7AQ01118 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.27□□□□□ -2.37
SCN7AQ01118 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC0.27□□□□□ -2.37
SCN7AQ01118 BLNK-209ENST00000495266 440 ntTSL 5 BASIC0.27□□□□□ -2.37
SCN7AQ01118 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC0.27□□□□□ -2.37
SCN7AQ01118 SNORA70.22-201ENST00000517160 124 ntBASIC0.27□□□□□ -2.37
SCN7AQ01118 AC090142.3-201ENST00000519012 385 ntBASIC0.27□□□□□ -2.37
SCN7AQ01118 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.27□□□□□ -2.37
SCN7AQ01118 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC0.27□□□□□ -2.37
SCN7AQ01118 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC0.27□□□□□ -2.37
SCN7AQ01118 AL512310.8-201ENST00000550183 120 ntBASIC0.27□□□□□ -2.37
SCN7AQ01118 BPTFP1-201ENST00000579209 492 ntBASIC0.27□□□□□ -2.37
SCN7AQ01118 MIR5190-201ENST00000581537 80 ntBASIC0.27□□□□□ -2.37
SCN7AQ01118 AC068790.6-201ENST00000602558 258 ntBASIC0.27□□□□□ -2.37
SCN7AQ01118 AP003465.2-201ENST00000602571 373 ntBASIC0.27□□□□□ -2.37
SCN7AQ01118 AL020997.3-201ENST00000602843 359 ntBASIC0.27□□□□□ -2.37
SCN7AQ01118 MTCO1P18-201ENST00000455518 1419 ntBASIC0.27□□□□□ -2.37
SCN7AQ01118 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC0.27□□□□□ -2.37
SCN7AQ01118 RNU6-529P-201ENST00000363383 104 ntBASIC0.27□□□□□ -2.37
SCN7AQ01118 MIR200A-201ENST00000384875 90 ntBASIC0.27□□□□□ -2.37
SCN7AQ01118 MIR597-201ENST00000384968 97 ntBASIC0.27□□□□□ -2.37
SCN7AQ01118 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC0.27□□□□□ -2.37
SCN7AQ01118 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
SCN7AQ01118 RPS3AP37-201ENST00000419176 745 ntBASIC0.27□□□□□ -2.37
SCN7AQ01118 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC0.27□□□□□ -2.37
SCN7AQ01118 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC0.27□□□□□ -2.37
SCN7AQ01118 AC002381.1-201ENST00000447049 280 ntBASIC0.27□□□□□ -2.37
SCN7AQ01118 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
SCN7AQ01118 RPL7P43-201ENST00000478876 753 ntBASIC0.27□□□□□ -2.37
SCN7AQ01118 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC0.27□□□□□ -2.37
SCN7AQ01118 AC005741.1-201ENST00000511094 432 ntBASIC0.27□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms