Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 MDM2-232ENST00000544561 213 ntTSL 5 BASIC0.1□□□□□ -2.39
PRKDCP78527 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC0.1□□□□□ -2.39
PRKDCP78527 AC027104.1-201ENST00000563702 681 ntBASIC0.1□□□□□ -2.39
PRKDCP78527 MIR4768-201ENST00000585270 74 ntBASIC0.1□□□□□ -2.39
PRKDCP78527 AL022067.1-201ENST00000602426 454 ntBASIC0.1□□□□□ -2.39
PRKDCP78527 AL022345.2-201ENST00000606307 135 ntBASIC0.1□□□□□ -2.39
PRKDCP78527 MIR4315-1-201ENST00000636800 73 ntBASIC0.1□□□□□ -2.39
PRKDCP78527 MIR4315-2-201ENST00000640925 73 ntBASIC0.1□□□□□ -2.39
PRKDCP78527 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC0.09□□□□□ -2.39
PRKDCP78527 RNU2-47P-201ENST00000410649 186 ntBASIC0.09□□□□□ -2.39
PRKDCP78527 AC132479.1-201ENST00000449160 144 ntBASIC0.09□□□□□ -2.39
PRKDCP78527 AP1S2P1-201ENST00000457344 379 ntBASIC0.09□□□□□ -2.39
PRKDCP78527 RPS26P55-201ENST00000471178 356 ntBASIC0.09□□□□□ -2.39
PRKDCP78527 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC0.09□□□□□ -2.39
PRKDCP78527 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC0.09□□□□□ -2.39
PRKDCP78527 AP003072.5-201ENST00000623872 773 ntBASIC0.09□□□□□ -2.39
PRKDCP78527 AP003400.6-201ENST00000624698 740 ntBASIC0.09□□□□□ -2.39
PRKDCP78527 MTND4P8-201ENST00000514997 1362 ntBASIC0.09□□□□□ -2.39
PRKDCP78527 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC0.09□□□□□ -2.39
PRKDCP78527 SNORD82-201ENST00000365530 70 ntBASIC0.09□□□□□ -2.4
PRKDCP78527 RNU6-546P-201ENST00000383991 107 ntBASIC0.09□□□□□ -2.4
PRKDCP78527 MIR1295A-201ENST00000408463 79 ntBASIC0.09□□□□□ -2.4
PRKDCP78527 EIF1P1-201ENST00000421436 341 ntBASIC0.09□□□□□ -2.4
PRKDCP78527 ELOCP14-201ENST00000428070 331 ntBASIC0.09□□□□□ -2.4
PRKDCP78527 ELOCP7-201ENST00000439968 331 ntBASIC0.09□□□□□ -2.4
PRKDCP78527 AC112771.1-201ENST00000463581 102 ntBASIC0.09□□□□□ -2.4
PRKDCP78527 AC092125.1-201ENST00000562568 1995 ntBASIC0.09□□□□□ -2.4
PRKDCP78527 SNORD3E-201ENST00000362899 217 ntBASIC0.09□□□□□ -2.4
PRKDCP78527 RNU6-374P-201ENST00000364146 108 ntBASIC0.09□□□□□ -2.4
PRKDCP78527 MIR95-201ENST00000385072 81 ntBASIC0.09□□□□□ -2.4
PRKDCP78527 RPL22P18-201ENST00000417197 377 ntBASIC0.09□□□□□ -2.4
PRKDCP78527 SNX2P2-201ENST00000424553 323 ntBASIC0.09□□□□□ -2.4
PRKDCP78527 MTCYBP1-201ENST00000454315 1119 ntBASIC0.09□□□□□ -2.4
PRKDCP78527 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC0.09□□□□□ -2.4
PRKDCP78527 RPL7P43-201ENST00000478876 753 ntBASIC0.09□□□□□ -2.4
PRKDCP78527 RPL36AP48-201ENST00000485521 314 ntBASIC0.09□□□□□ -2.4
PRKDCP78527 AC084024.2-201ENST00000503480 791 ntBASIC0.09□□□□□ -2.4
PRKDCP78527 COX7A2P2-201ENST00000505291 250 ntBASIC0.09□□□□□ -2.4
PRKDCP78527 AC113398.2-201ENST00000507630 558 ntBASIC0.09□□□□□ -2.4
PRKDCP78527 SCARNA16.2-201ENST00000516520 172 ntBASIC0.09□□□□□ -2.4
PRKDCP78527 RNA5SP291-201ENST00000517222 105 ntBASIC0.09□□□□□ -2.4
PRKDCP78527 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC0.09□□□□□ -2.4
PRKDCP78527 AP003049.1-201ENST00000529418 457 ntBASIC0.09□□□□□ -2.4
PRKDCP78527 AC233702.2-202ENST00000562547 291 ntBASIC0.09□□□□□ -2.4
PRKDCP78527 AC022254.1-201ENST00000567857 235 ntBASIC0.09□□□□□ -2.4
PRKDCP78527 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC0.09□□□□□ -2.4
PRKDCP78527 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.09□□□□□ -2.4
PRKDCP78527 AL138713.1-201ENST00000624026 2130 ntBASIC0.09□□□□□ -2.4
PRKDCP78527 RNU6-441P-201ENST00000384545 106 ntBASIC0.08□□□□□ -2.4
PRKDCP78527 USP9YP19-201ENST00000412165 485 ntBASIC0.08□□□□□ -2.4
PRKDCP78527 USP9YP13-201ENST00000417797 480 ntBASIC0.08□□□□□ -2.4
PRKDCP78527 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC0.08□□□□□ -2.4
PRKDCP78527 AC093677.1-201ENST00000514414 678 ntBASIC0.08□□□□□ -2.4
PRKDCP78527 CYB5AP5-201ENST00000549779 389 ntBASIC0.08□□□□□ -2.4
PRKDCP78527 AC026371.1-201ENST00000551867 419 ntBASIC0.08□□□□□ -2.4
PRKDCP78527 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC0.08□□□□□ -2.4
PRKDCP78527 AP000811.1-201ENST00000603803 651 ntBASIC0.08□□□□□ -2.4
PRKDCP78527 Z82243.1-201ENST00000609432 473 ntBASIC0.08□□□□□ -2.4
PRKDCP78527 AL133445.2-201ENST00000611191 527 ntBASIC0.08□□□□□ -2.4
PRKDCP78527 uc_338.6-201ENST00000613544 171 ntBASIC0.08□□□□□ -2.4
PRKDCP78527 RNA5SP98-201ENST00000363158 137 ntBASIC0.08□□□□□ -2.4
PRKDCP78527 UBE2V1P4-201ENST00000425374 344 ntBASIC0.08□□□□□ -2.4
PRKDCP78527 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC0.08□□□□□ -2.4
PRKDCP78527 RNU6-197P-201ENST00000516680 100 ntBASIC0.08□□□□□ -2.4
PRKDCP78527 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.08□□□□□ -2.4
PRKDCP78527 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC0.08□□□□□ -2.4
PRKDCP78527 AC092447.10-201ENST00000620607 1652 ntBASIC0.08□□□□□ -2.4
PRKDCP78527 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC0.08□□□□□ -2.4
PRKDCP78527 MIR411-201ENST00000362239 96 ntBASIC0.08□□□□□ -2.4
PRKDCP78527 SNORD118-201ENST00000363593 134 ntBASIC0.08□□□□□ -2.4
PRKDCP78527 SNORD1A-201ENST00000364968 72 ntBASIC0.08□□□□□ -2.4
PRKDCP78527 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC0.08□□□□□ -2.4
PRKDCP78527 AC010631.1-201ENST00000474150 156 ntBASIC0.08□□□□□ -2.4
PRKDCP78527 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC0.08□□□□□ -2.4
PRKDCP78527 PDCD5P2-201ENST00000507570 312 ntBASIC0.08□□□□□ -2.4
PRKDCP78527 AC112206.3-201ENST00000514578 389 ntBASIC0.08□□□□□ -2.4
PRKDCP78527 RNU6-902P-201ENST00000517212 91 ntBASIC0.08□□□□□ -2.4
PRKDCP78527 HMSD-204ENST00000526932 162 ntTSL 3 BASIC0.08□□□□□ -2.4
PRKDCP78527 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC0.08□□□□□ -2.4
PRKDCP78527 CYP3A52P-201ENST00000563326 91 ntBASIC0.08□□□□□ -2.4
PRKDCP78527 AL713866.2-201ENST00000603579 219 ntBASIC0.08□□□□□ -2.4
PRKDCP78527 AC112220.3-201ENST00000605502 502 ntBASIC0.08□□□□□ -2.4
PRKDCP78527 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.08□□□□□ -2.4
PRKDCP78527 RNU4-45P-201ENST00000365469 141 ntBASIC0.07□□□□□ -2.4
PRKDCP78527 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.07□□□□□ -2.4
PRKDCP78527 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC0.07□□□□□ -2.4
PRKDCP78527 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.07□□□□□ -2.4
PRKDCP78527 RNA5SP255-201ENST00000516370 107 ntBASIC0.07□□□□□ -2.4
PRKDCP78527 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.07□□□□□ -2.4
PRKDCP78527 AC022616.2-201ENST00000523185 300 ntBASIC0.07□□□□□ -2.4
PRKDCP78527 AC090079.2-201ENST00000575289 768 ntBASIC0.07□□□□□ -2.4
PRKDCP78527 MIR3167-201ENST00000579623 85 ntBASIC0.07□□□□□ -2.4
PRKDCP78527 AC025627.3-201ENST00000582078 182 ntBASIC0.07□□□□□ -2.4
PRKDCP78527 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC0.07□□□□□ -2.4
PRKDCP78527 AC090116.1-201ENST00000615679 446 ntBASIC0.07□□□□□ -2.4
PRKDCP78527 AL159152.1-201ENST00000635019 2587 ntBASIC0.07□□□□□ -2.4
PRKDCP78527 GDI2P1-201ENST00000429312 1336 ntBASIC0.07□□□□□ -2.4
PRKDCP78527 RNU6-140P-201ENST00000384566 108 ntBASIC0.07□□□□□ -2.4
PRKDCP78527 Y_RNA.559-201ENST00000384686 107 ntBASIC0.07□□□□□ -2.4
PRKDCP78527 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC0.07□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 131.6 ms