Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 AKIRIN2P1-201ENST00000505898 352 ntBASIC0.28□□□□□ -2.36
UBA52P62987 RNU6-581P-201ENST00000516214 105 ntBASIC0.28□□□□□ -2.36
UBA52P62987 RN7SKP88-201ENST00000516847 250 ntBASIC0.28□□□□□ -2.36
UBA52P62987 RNU6-703P-201ENST00000516946 107 ntBASIC0.28□□□□□ -2.36
UBA52P62987 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC0.28□□□□□ -2.36
UBA52P62987 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC0.28□□□□□ -2.36
UBA52P62987 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.28□□□□□ -2.36
UBA52P62987 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.28□□□□□ -2.36
UBA52P62987 7SK.8-201ENST00000612110 250 ntBASIC0.28□□□□□ -2.36
UBA52P62987 7SK.11-201ENST00000615477 250 ntBASIC0.28□□□□□ -2.36
UBA52P62987 7SK.13-201ENST00000622040 250 ntBASIC0.28□□□□□ -2.36
UBA52P62987 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC0.28□□□□□ -2.37
UBA52P62987 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.28□□□□□ -2.37
UBA52P62987 RNU6-115P-201ENST00000364310 107 ntBASIC0.27□□□□□ -2.37
UBA52P62987 RNU6-891P-201ENST00000384280 111 ntBASIC0.27□□□□□ -2.37
UBA52P62987 RNA5SP63-201ENST00000391225 112 ntBASIC0.27□□□□□ -2.37
UBA52P62987 AC119751.3-201ENST00000399720 670 ntBASIC0.27□□□□□ -2.37
UBA52P62987 AL358794.1-201ENST00000445689 381 ntBASIC0.27□□□□□ -2.37
UBA52P62987 AC092001.1-201ENST00000453012 261 ntBASIC0.27□□□□□ -2.37
UBA52P62987 CECR9-201ENST00000453421 199 ntBASIC0.27□□□□□ -2.37
UBA52P62987 GTF2IP12-201ENST00000456547 356 ntBASIC0.27□□□□□ -2.37
UBA52P62987 SNORD124-201ENST00000459577 104 ntBASIC0.27□□□□□ -2.37
UBA52P62987 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC0.27□□□□□ -2.37
UBA52P62987 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC0.27□□□□□ -2.37
UBA52P62987 RNU6-1092P-201ENST00000516955 87 ntBASIC0.27□□□□□ -2.37
UBA52P62987 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC0.27□□□□□ -2.37
UBA52P62987 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.27□□□□□ -2.37
UBA52P62987 AC004853.1-201ENST00000604902 698 ntBASIC0.27□□□□□ -2.37
UBA52P62987 AC104465.1-201ENST00000611365 139 ntBASIC0.27□□□□□ -2.37
UBA52P62987 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC0.27□□□□□ -2.37
UBA52P62987 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC0.27□□□□□ -2.37
UBA52P62987 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC0.26□□□□□ -2.37
UBA52P62987 AC134026.1-201ENST00000623249 2239 ntBASIC0.26□□□□□ -2.37
UBA52P62987 SNORA63.3-201ENST00000362682 132 ntBASIC0.26□□□□□ -2.37
UBA52P62987 RNU6-619P-201ENST00000365146 108 ntBASIC0.26□□□□□ -2.37
UBA52P62987 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.26□□□□□ -2.37
UBA52P62987 MTCO1P56-201ENST00000401674 224 ntBASIC0.26□□□□□ -2.37
UBA52P62987 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC0.26□□□□□ -2.37
UBA52P62987 AC010153.1-201ENST00000432862 727 ntBASIC0.26□□□□□ -2.37
UBA52P62987 GTF2IP13-201ENST00000438487 386 ntBASIC0.26□□□□□ -2.37
UBA52P62987 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC0.26□□□□□ -2.37
UBA52P62987 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC0.26□□□□□ -2.37
UBA52P62987 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC0.26□□□□□ -2.37
UBA52P62987 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC0.26□□□□□ -2.37
UBA52P62987 RNA5SP290-201ENST00000517133 127 ntBASIC0.26□□□□□ -2.37
UBA52P62987 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC0.26□□□□□ -2.37
UBA52P62987 AC006518.2-201ENST00000542513 940 ntBASIC0.26□□□□□ -2.37
UBA52P62987 AC093249.1-201ENST00000567049 203 ntBASIC0.26□□□□□ -2.37
UBA52P62987 AC002545.1-201ENST00000592511 181 ntBASIC0.26□□□□□ -2.37
UBA52P62987 AC022432.1-201ENST00000595739 310 ntBASIC0.26□□□□□ -2.37
UBA52P62987 RPL30P11-203ENST00000598995 310 ntBASIC0.26□□□□□ -2.37
UBA52P62987 AL159972.1-201ENST00000625150 448 ntBASIC0.26□□□□□ -2.37
UBA52P62987 AC008993.2-201ENST00000631744 806 ntBASIC0.26□□□□□ -2.37
UBA52P62987 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC0.26□□□□□ -2.37
UBA52P62987 MTCO1P18-201ENST00000455518 1419 ntBASIC0.25□□□□□ -2.37
UBA52P62987 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC0.25□□□□□ -2.37
UBA52P62987 RNA5SP361-201ENST00000362686 118 ntBASIC0.25□□□□□ -2.37
UBA52P62987 Y_RNA.99-201ENST00000363138 105 ntBASIC0.25□□□□□ -2.37
UBA52P62987 RNU4-67P-201ENST00000364569 141 ntBASIC0.25□□□□□ -2.37
UBA52P62987 RNU6-1274P-201ENST00000384557 107 ntBASIC0.25□□□□□ -2.37
UBA52P62987 RNU6-360P-201ENST00000390944 104 ntBASIC0.25□□□□□ -2.37
UBA52P62987 AL133475.1-201ENST00000404414 305 ntBASIC0.25□□□□□ -2.37
UBA52P62987 RPS3AP1-201ENST00000413190 320 ntBASIC0.25□□□□□ -2.37
UBA52P62987 AC010099.3-201ENST00000423896 409 ntBASIC0.25□□□□□ -2.37
UBA52P62987 CETN4P-201ENST00000432407 469 ntBASIC0.25□□□□□ -2.37
UBA52P62987 RPS15AP9-201ENST00000439856 381 ntBASIC0.25□□□□□ -2.37
UBA52P62987 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.25□□□□□ -2.37
UBA52P62987 AC002381.1-201ENST00000447049 280 ntBASIC0.25□□□□□ -2.37
UBA52P62987 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.25□□□□□ -2.37
UBA52P62987 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC0.25□□□□□ -2.37
UBA52P62987 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.25□□□□□ -2.37
UBA52P62987 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.25□□□□□ -2.37
UBA52P62987 AC115989.2-201ENST00000578640 563 ntBASIC0.25□□□□□ -2.37
UBA52P62987 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC0.25□□□□□ -2.37
UBA52P62987 AC022387.2-201ENST00000604050 448 ntBASIC0.25□□□□□ -2.37
UBA52P62987 AP001596.2-201ENST00000608410 312 ntBASIC0.25□□□□□ -2.37
UBA52P62987 AC004908.3-201ENST00000610248 625 ntBASIC0.25□□□□□ -2.37
UBA52P62987 AC130324.3-201ENST00000614165 542 ntBASIC0.25□□□□□ -2.37
UBA52P62987 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC0.24□□□□□ -2.37
UBA52P62987 RNU6-23P-201ENST00000363283 107 ntBASIC0.24□□□□□ -2.37
UBA52P62987 U3.8-201ENST00000363675 217 ntBASIC0.24□□□□□ -2.37
UBA52P62987 RNA5SP493-201ENST00000364115 91 ntBASIC0.24□□□□□ -2.37
UBA52P62987 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC0.24□□□□□ -2.37
UBA52P62987 RNU6-546P-201ENST00000383991 107 ntBASIC0.24□□□□□ -2.37
UBA52P62987 Y_RNA.433-201ENST00000384089 102 ntBASIC0.24□□□□□ -2.37
UBA52P62987 Y_RNA.548-201ENST00000384656 105 ntBASIC0.24□□□□□ -2.37
UBA52P62987 MIR548B-201ENST00000385247 97 ntBASIC0.24□□□□□ -2.37
UBA52P62987 SNX2P2-201ENST00000424553 323 ntBASIC0.24□□□□□ -2.37
UBA52P62987 AL589872.1-201ENST00000426602 288 ntBASIC0.24□□□□□ -2.37
UBA52P62987 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC0.24□□□□□ -2.37
UBA52P62987 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC0.24□□□□□ -2.37
UBA52P62987 ACA59.2-201ENST00000517061 156 ntBASIC0.24□□□□□ -2.37
UBA52P62987 AC018659.1-201ENST00000551083 169 ntBASIC0.24□□□□□ -2.37
UBA52P62987 MIR3664-201ENST00000579074 99 ntBASIC0.24□□□□□ -2.37
UBA52P62987 AL355802.4-201ENST00000607635 548 ntBASIC0.24□□□□□ -2.37
UBA52P62987 AL590396.4-201ENST00000636779 956 ntBASIC0.24□□□□□ -2.37
UBA52P62987 AC092447.10-201ENST00000620607 1652 ntBASIC0.24□□□□□ -2.37
UBA52P62987 Y_RNA.280-201ENST00000364765 112 ntBASIC0.23□□□□□ -2.37
UBA52P62987 AL356776.1-201ENST00000406574 447 ntBASIC0.23□□□□□ -2.37
UBA52P62987 DNAJA1P2-201ENST00000421360 1197 ntBASIC0.23□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 127.3 ms