Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 SNORA40.4-201ENST00000390971 128 ntBASIC1.21□□□□□ -2.22
ACTBP60709 RNA5SP213-201ENST00000391031 106 ntBASIC1.21□□□□□ -2.22
ACTBP60709 MIR1323-201ENST00000408090 73 ntBASIC1.21□□□□□ -2.22
ACTBP60709 RNU2-62P-201ENST00000410868 191 ntBASIC1.21□□□□□ -2.22
ACTBP60709 Y_RNA.623-201ENST00000411128 95 ntBASIC1.21□□□□□ -2.22
ACTBP60709 UBE2V1P10-201ENST00000414685 269 ntBASIC1.21□□□□□ -2.22
ACTBP60709 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.21□□□□□ -2.22
ACTBP60709 NCOR1P3-201ENST00000420479 303 ntBASIC1.21□□□□□ -2.22
ACTBP60709 AL121601.2-201ENST00000438019 707 ntBASIC1.21□□□□□ -2.22
ACTBP60709 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC1.21□□□□□ -2.22
ACTBP60709 RPL31P58-201ENST00000469001 379 ntBASIC1.21□□□□□ -2.22
ACTBP60709 AC119751.4-201ENST00000507498 357 ntBASIC1.21□□□□□ -2.22
ACTBP60709 RNA5SP445-201ENST00000515889 115 ntBASIC1.21□□□□□ -2.22
ACTBP60709 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC1.21□□□□□ -2.22
ACTBP60709 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.21□□□□□ -2.22
ACTBP60709 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
ACTBP60709 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC1.21□□□□□ -2.22
ACTBP60709 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.21□□□□□ -2.22
ACTBP60709 AP000942.3-201ENST00000603702 160 ntBASIC1.21□□□□□ -2.22
ACTBP60709 AC069431.2-201ENST00000604149 1099 ntBASIC1.21□□□□□ -2.22
ACTBP60709 AP000860.1-201ENST00000605250 559 ntBASIC1.21□□□□□ -2.22
ACTBP60709 FRG1KP-201ENST00000623592 341 ntBASIC1.21□□□□□ -2.22
ACTBP60709 AC013437.2-201ENST00000639587 677 ntBASIC1.21□□□□□ -2.22
ACTBP60709 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
ACTBP60709 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
ACTBP60709 MIR412-201ENST00000362142 91 ntBASIC1.2□□□□□ -2.22
ACTBP60709 RNU4-92P-201ENST00000363783 136 ntBASIC1.2□□□□□ -2.22
ACTBP60709 RNU6-946P-201ENST00000383878 107 ntBASIC1.2□□□□□ -2.22
ACTBP60709 RNU6-190P-201ENST00000384154 102 ntBASIC1.2□□□□□ -2.22
ACTBP60709 SNORA67.5-201ENST00000391036 107 ntBASIC1.2□□□□□ -2.22
ACTBP60709 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.2□□□□□ -2.22
ACTBP60709 CR769776.1-201ENST00000441254 787 ntBASIC1.2□□□□□ -2.22
ACTBP60709 PTENP1-201ENST00000447117 1215 ntBASIC1.2□□□□□ -2.22
ACTBP60709 AC093899.1-201ENST00000457984 376 ntBASIC1.2□□□□□ -2.22
ACTBP60709 RNU6-991P-201ENST00000516168 107 ntBASIC1.2□□□□□ -2.22
ACTBP60709 RNU6-902P-201ENST00000517212 91 ntBASIC1.2□□□□□ -2.22
ACTBP60709 SNORA31.24-201ENST00000517232 57 ntBASIC1.2□□□□□ -2.22
ACTBP60709 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
ACTBP60709 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.2□□□□□ -2.22
ACTBP60709 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.2□□□□□ -2.22
ACTBP60709 AL355802.3-201ENST00000607571 545 ntBASIC1.2□□□□□ -2.22
ACTBP60709 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.2□□□□□ -2.22
ACTBP60709 AC009269.6-201ENST00000621778 588 ntBASIC1.2□□□□□ -2.22
ACTBP60709 AL138960.2-201ENST00000625145 535 ntBASIC1.2□□□□□ -2.22
ACTBP60709 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.2□□□□□ -2.22
ACTBP60709 U8.1-201ENST00000362843 134 ntBASIC1.19□□□□□ -2.22
ACTBP60709 SNORD3E-201ENST00000362899 217 ntBASIC1.19□□□□□ -2.22
ACTBP60709 RNU6-60P-201ENST00000364792 103 ntBASIC1.19□□□□□ -2.22
ACTBP60709 Y_RNA.338-201ENST00000365320 114 ntBASIC1.19□□□□□ -2.22
ACTBP60709 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC1.19□□□□□ -2.22
ACTBP60709 RNA5SP100-201ENST00000410903 110 ntBASIC1.19□□□□□ -2.22
ACTBP60709 RNA5SP59-201ENST00000410922 110 ntBASIC1.19□□□□□ -2.22
ACTBP60709 AC009518.2-201ENST00000418056 731 ntBASIC1.19□□□□□ -2.22
ACTBP60709 AL354695.1-201ENST00000427935 228 ntBASIC1.19□□□□□ -2.22
ACTBP60709 AL627311.1-201ENST00000431514 115 ntBASIC1.19□□□□□ -2.22
ACTBP60709 AC015922.2-201ENST00000435593 184 ntBASIC1.19□□□□□ -2.22
ACTBP60709 AL008629.1-201ENST00000438615 184 ntBASIC1.19□□□□□ -2.22
ACTBP60709 MTCO1P44-201ENST00000441935 243 ntBASIC1.19□□□□□ -2.22
ACTBP60709 SNRPGP13-201ENST00000442212 177 ntBASIC1.19□□□□□ -2.22
ACTBP60709 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.19□□□□□ -2.22
ACTBP60709 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC1.19□□□□□ -2.22
ACTBP60709 AC092104.1-201ENST00000497346 1441 ntBASIC1.19□□□□□ -2.22
ACTBP60709 AC108729.3-201ENST00000513484 108 ntBASIC1.19□□□□□ -2.22
ACTBP60709 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC1.19□□□□□ -2.22
ACTBP60709 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.19□□□□□ -2.22
ACTBP60709 RNU6-1003P-201ENST00000517099 105 ntBASIC1.19□□□□□ -2.22
ACTBP60709 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.19□□□□□ -2.22
ACTBP60709 AP003122.4-201ENST00000530980 758 ntBASIC1.19□□□□□ -2.22
ACTBP60709 AC023050.2-201ENST00000544968 387 ntBASIC1.19□□□□□ -2.22
ACTBP60709 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC1.19□□□□□ -2.22
ACTBP60709 AC015720.1-201ENST00000565251 277 ntBASIC1.19□□□□□ -2.22
ACTBP60709 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.19□□□□□ -2.22
ACTBP60709 MIR4307-201ENST00000582802 84 ntBASIC1.19□□□□□ -2.22
ACTBP60709 AL138889.2-201ENST00000603883 242 ntBASIC1.19□□□□□ -2.22
ACTBP60709 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.19□□□□□ -2.22
ACTBP60709 AC006338.1-201ENST00000618453 749 ntBASIC1.19□□□□□ -2.22
ACTBP60709 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.19□□□□□ -2.22
ACTBP60709 AC004808.1-201ENST00000627671 721 ntBASIC1.19□□□□□ -2.22
ACTBP60709 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.19□□□□□ -2.22
ACTBP60709 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
ACTBP60709 MIR378A-201ENST00000362177 66 ntBASIC1.18□□□□□ -2.22
ACTBP60709 Y_RNA.99-201ENST00000363138 105 ntBASIC1.18□□□□□ -2.22
ACTBP60709 SNORD14B-201ENST00000364533 90 ntBASIC1.18□□□□□ -2.22
ACTBP60709 MIR29B2-201ENST00000385055 81 ntBASIC1.18□□□□□ -2.22
ACTBP60709 RNA5SP390-201ENST00000410191 113 ntBASIC1.18□□□□□ -2.22
ACTBP60709 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC1.18□□□□□ -2.22
ACTBP60709 AL353777.1-201ENST00000425552 326 ntBASIC1.18□□□□□ -2.22
ACTBP60709 AC108667.1-201ENST00000428618 249 ntBASIC1.18□□□□□ -2.22
ACTBP60709 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.18□□□□□ -2.22
ACTBP60709 MTND3P1-201ENST00000441336 220 ntBASIC1.18□□□□□ -2.22
ACTBP60709 CALM1P1-201ENST00000442082 433 ntBASIC1.18□□□□□ -2.22
ACTBP60709 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC1.18□□□□□ -2.22
ACTBP60709 AL353752.1-201ENST00000454946 260 ntBASIC1.18□□□□□ -2.22
ACTBP60709 RN7SKP210-201ENST00000459176 261 ntBASIC1.18□□□□□ -2.22
ACTBP60709 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC1.18□□□□□ -2.22
ACTBP60709 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.18□□□□□ -2.22
ACTBP60709 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.18□□□□□ -2.22
ACTBP60709 RNU6-201P-201ENST00000517100 61 ntBASIC1.18□□□□□ -2.22
ACTBP60709 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.18□□□□□ -2.22
ACTBP60709 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 162 ms