Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.95□□□□□ -1.94
PTPN9P43378 SNAP23P1-201ENST00000433229 246 ntBASIC2.95□□□□□ -1.94
PTPN9P43378 AL513043.1-201ENST00000439124 535 ntBASIC2.95□□□□□ -1.94
PTPN9P43378 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2.95□□□□□ -1.94
PTPN9P43378 RPL32P28-201ENST00000443577 397 ntBASIC2.95□□□□□ -1.94
PTPN9P43378 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC2.95□□□□□ -1.94
PTPN9P43378 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
PTPN9P43378 AMD1P1-201ENST00000457220 922 ntBASIC2.95□□□□□ -1.94
PTPN9P43378 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.95□□□□□ -1.94
PTPN9P43378 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.95□□□□□ -1.94
PTPN9P43378 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.95□□□□□ -1.94
PTPN9P43378 RNA5SP76-201ENST00000516277 87 ntBASIC2.95□□□□□ -1.94
PTPN9P43378 Y_RNA.691-201ENST00000516611 103 ntBASIC2.95□□□□□ -1.94
PTPN9P43378 AP005597.4-201ENST00000526762 229 ntBASIC2.95□□□□□ -1.94
PTPN9P43378 HPRT1P3-201ENST00000539521 576 ntBASIC2.95□□□□□ -1.94
PTPN9P43378 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.95□□□□□ -1.94
PTPN9P43378 AC026464.5-201ENST00000562497 722 ntBASIC2.95□□□□□ -1.94
PTPN9P43378 AC091135.1-201ENST00000585943 307 ntBASIC2.95□□□□□ -1.94
PTPN9P43378 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.95□□□□□ -1.94
PTPN9P43378 AC123912.5-201ENST00000605470 343 ntBASIC2.95□□□□□ -1.94
PTPN9P43378 AC092593.1-201ENST00000515413 1815 ntBASIC2.95□□□□□ -1.94
PTPN9P43378 AC009487.2-201ENST00000420969 6821 ntBASIC2.95□□□□□ -1.94
PTPN9P43378 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
PTPN9P43378 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
PTPN9P43378 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
PTPN9P43378 Y_RNA.142-201ENST00000363491 102 ntBASIC2.94□□□□□ -1.94
PTPN9P43378 Y_RNA.263-201ENST00000364659 114 ntBASIC2.94□□□□□ -1.94
PTPN9P43378 RNU5E-7P-201ENST00000365290 117 ntBASIC2.94□□□□□ -1.94
PTPN9P43378 RNU6-1329P-201ENST00000365664 107 ntBASIC2.94□□□□□ -1.94
PTPN9P43378 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
PTPN9P43378 CD24P4-201ENST00000382840 243 ntBASIC2.94□□□□□ -1.94
PTPN9P43378 MIR181A2-201ENST00000384863 110 ntBASIC2.94□□□□□ -1.94
PTPN9P43378 RNU6-750P-201ENST00000390946 107 ntBASIC2.94□□□□□ -1.94
PTPN9P43378 AL645568.3-201ENST00000433683 316 ntBASIC2.94□□□□□ -1.94
PTPN9P43378 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
PTPN9P43378 MTND1P11-201ENST00000456661 876 ntBASIC2.94□□□□□ -1.94
PTPN9P43378 RPL23AP45-201ENST00000476406 468 ntBASIC2.94□□□□□ -1.94
PTPN9P43378 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC2.94□□□□□ -1.94
PTPN9P43378 AC008526.1-201ENST00000509149 338 ntBASIC2.94□□□□□ -1.94
PTPN9P43378 AC114781.4-201ENST00000513707 639 ntBASIC2.94□□□□□ -1.94
PTPN9P43378 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.94□□□□□ -1.94
PTPN9P43378 SCOCP1-201ENST00000554676 349 ntBASIC2.94□□□□□ -1.94
PTPN9P43378 AC005668.1-201ENST00000571142 476 ntBASIC2.94□□□□□ -1.94
PTPN9P43378 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.94□□□□□ -1.94
PTPN9P43378 VN1R107P-201ENST00000601784 209 ntBASIC2.94□□□□□ -1.94
PTPN9P43378 AC005000.2-201ENST00000605468 310 ntBASIC2.94□□□□□ -1.94
PTPN9P43378 AC009994.1-201ENST00000606889 253 ntBASIC2.94□□□□□ -1.94
PTPN9P43378 AC099654.5-201ENST00000636479 350 ntBASIC2.94□□□□□ -1.94
PTPN9P43378 U4.7-201ENST00000638126 106 ntBASIC2.94□□□□□ -1.94
PTPN9P43378 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
PTPN9P43378 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.94□□□□□ -1.94
PTPN9P43378 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.94□□□□□ -1.94
PTPN9P43378 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.94□□□□□ -1.94
PTPN9P43378 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.94□□□□□ -1.94
PTPN9P43378 HAUS6P2-201ENST00000433254 2404 ntBASIC2.93□□□□□ -1.94
PTPN9P43378 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
PTPN9P43378 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.93□□□□□ -1.94
PTPN9P43378 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.93□□□□□ -1.94
PTPN9P43378 MIR26A1-201ENST00000362205 77 ntBASIC2.93□□□□□ -1.94
PTPN9P43378 RNU6-37P-201ENST00000362692 107 ntBASIC2.93□□□□□ -1.94
PTPN9P43378 RNU6-11P-201ENST00000364234 107 ntBASIC2.93□□□□□ -1.94
PTPN9P43378 RNU6-7-201ENST00000364784 107 ntBASIC2.93□□□□□ -1.94
PTPN9P43378 RNU6-8-201ENST00000365467 107 ntBASIC2.93□□□□□ -1.94
PTPN9P43378 RNU6-25P-201ENST00000383873 107 ntBASIC2.93□□□□□ -1.94
PTPN9P43378 SNORD116-11-201ENST00000383882 92 ntBASIC2.93□□□□□ -1.94
PTPN9P43378 RNU6-1-201ENST00000383898 107 ntBASIC2.93□□□□□ -1.94
PTPN9P43378 RNU6-48P-201ENST00000384161 107 ntBASIC2.93□□□□□ -1.94
PTPN9P43378 RNU6-36P-201ENST00000384172 107 ntBASIC2.93□□□□□ -1.94
PTPN9P43378 RNU6-4P-201ENST00000384205 107 ntBASIC2.93□□□□□ -1.94
PTPN9P43378 RNU6-5P-201ENST00000384238 107 ntBASIC2.93□□□□□ -1.94
PTPN9P43378 RNU6-3P-201ENST00000384314 107 ntBASIC2.93□□□□□ -1.94
PTPN9P43378 RNU6-16P-201ENST00000384385 107 ntBASIC2.93□□□□□ -1.94
PTPN9P43378 RNU6-15P-201ENST00000384534 107 ntBASIC2.93□□□□□ -1.94
PTPN9P43378 RNU6-2-201ENST00000384627 107 ntBASIC2.93□□□□□ -1.94
PTPN9P43378 RNU6-29P-201ENST00000384637 107 ntBASIC2.93□□□□□ -1.94
PTPN9P43378 RNU6-9-201ENST00000384776 107 ntBASIC2.93□□□□□ -1.94
PTPN9P43378 RNU6-33P-201ENST00000384793 107 ntBASIC2.93□□□□□ -1.94
PTPN9P43378 SNORA48.2-201ENST00000390926 124 ntBASIC2.93□□□□□ -1.94
PTPN9P43378 AL122016.1-201ENST00000403365 367 ntBASIC2.93□□□□□ -1.94
PTPN9P43378 AL356432.1-201ENST00000405809 419 ntBASIC2.93□□□□□ -1.94
PTPN9P43378 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.93□□□□□ -1.94
PTPN9P43378 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.93□□□□□ -1.94
PTPN9P43378 PPP1R2P5-201ENST00000457256 603 ntBASIC2.93□□□□□ -1.94
PTPN9P43378 AC003982.1-202ENST00000469928 248 ntBASIC2.93□□□□□ -1.94
PTPN9P43378 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.93□□□□□ -1.94
PTPN9P43378 AC116655.1-201ENST00000508324 901 ntBASIC2.93□□□□□ -1.94
PTPN9P43378 FGF7P4-201ENST00000509595 295 ntBASIC2.93□□□□□ -1.94
PTPN9P43378 RNU6-566P-201ENST00000516790 107 ntBASIC2.93□□□□□ -1.94
PTPN9P43378 RNU6-56P-201ENST00000516986 93 ntBASIC2.93□□□□□ -1.94
PTPN9P43378 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.93□□□□□ -1.94
PTPN9P43378 CR383656.8-201ENST00000549046 145 ntBASIC2.93□□□□□ -1.94
PTPN9P43378 AC025423.5-201ENST00000550230 219 ntBASIC2.93□□□□□ -1.94
PTPN9P43378 AL121821.2-201ENST00000556081 394 ntBASIC2.93□□□□□ -1.94
PTPN9P43378 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.93□□□□□ -1.94
PTPN9P43378 MIR3605-201ENST00000583214 100 ntBASIC2.93□□□□□ -1.94
PTPN9P43378 RNU6-6P-201ENST00000606623 107 ntBASIC2.93□□□□□ -1.94
PTPN9P43378 AC069234.5-201ENST00000611056 416 ntBASIC2.93□□□□□ -1.94
PTPN9P43378 AC010378.1-201ENST00000619270 362 ntBASIC2.93□□□□□ -1.94
PTPN9P43378 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.93□□□□□ -1.94
PTPN9P43378 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 152.5 ms