Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 uc_338.5-201ENST00000611839 155 ntBASIC1.68□□□□□ -2.14
SLC1A1P43005 AL773524.1-201ENST00000614065 229 ntBASIC1.68□□□□□ -2.14
SLC1A1P43005 AC116165.2-201ENST00000616705 206 ntBASIC1.68□□□□□ -2.14
SLC1A1P43005 AL157786.1-207ENST00000627771 695 ntBASIC1.68□□□□□ -2.14
SLC1A1P43005 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.68□□□□□ -2.14
SLC1A1P43005 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
SLC1A1P43005 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.67□□□□□ -2.14
SLC1A1P43005 RNU6-212P-201ENST00000362642 104 ntBASIC1.67□□□□□ -2.14
SLC1A1P43005 RNU5F-7P-201ENST00000363696 115 ntBASIC1.67□□□□□ -2.14
SLC1A1P43005 RNU6-1210P-201ENST00000363775 107 ntBASIC1.67□□□□□ -2.14
SLC1A1P43005 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC1.67□□□□□ -2.14
SLC1A1P43005 RNU6-546P-201ENST00000383991 107 ntBASIC1.67□□□□□ -2.14
SLC1A1P43005 MIR558-201ENST00000384920 94 ntBASIC1.67□□□□□ -2.14
SLC1A1P43005 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
SLC1A1P43005 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.67□□□□□ -2.14
SLC1A1P43005 BX510359.4-201ENST00000423750 193 ntBASIC1.67□□□□□ -2.14
SLC1A1P43005 MED13P1-201ENST00000428342 171 ntBASIC1.67□□□□□ -2.14
SLC1A1P43005 AL365400.1-201ENST00000431854 640 ntBASIC1.67□□□□□ -2.14
SLC1A1P43005 MTND5P2-201ENST00000442927 1142 ntBASIC1.67□□□□□ -2.14
SLC1A1P43005 AL360271.2-201ENST00000447710 161 ntBASIC1.67□□□□□ -2.14
SLC1A1P43005 snoU109.1-201ENST00000459339 135 ntBASIC1.67□□□□□ -2.14
SLC1A1P43005 AC117522.1-201ENST00000509821 380 ntBASIC1.67□□□□□ -2.14
SLC1A1P43005 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.67□□□□□ -2.14
SLC1A1P43005 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.67□□□□□ -2.14
SLC1A1P43005 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC1.67□□□□□ -2.14
SLC1A1P43005 HMGN1P30-201ENST00000589286 268 ntBASIC1.67□□□□□ -2.14
SLC1A1P43005 AC116312.1-201ENST00000606841 314 ntBASIC1.67□□□□□ -2.14
SLC1A1P43005 AC004908.3-201ENST00000610248 625 ntBASIC1.67□□□□□ -2.14
SLC1A1P43005 MIR6845-201ENST00000613182 61 ntBASIC1.67□□□□□ -2.14
SLC1A1P43005 AC009878.1-201ENST00000621819 340 ntBASIC1.67□□□□□ -2.14
SLC1A1P43005 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.67□□□□□ -2.14
SLC1A1P43005 FARSBP1-201ENST00000435808 1778 ntBASIC1.67□□□□□ -2.14
SLC1A1P43005 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
SLC1A1P43005 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
SLC1A1P43005 U8.3-201ENST00000363321 132 ntBASIC1.66□□□□□ -2.14
SLC1A1P43005 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
SLC1A1P43005 RPS3AP36-201ENST00000398190 775 ntBASIC1.66□□□□□ -2.14
SLC1A1P43005 AL356432.1-201ENST00000405809 419 ntBASIC1.66□□□□□ -2.14
SLC1A1P43005 MIR1262-201ENST00000408276 93 ntBASIC1.66□□□□□ -2.14
SLC1A1P43005 AC074117.2-201ENST00000417130 397 ntBASIC1.66□□□□□ -2.14
SLC1A1P43005 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.66□□□□□ -2.14
SLC1A1P43005 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.66□□□□□ -2.14
SLC1A1P43005 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.66□□□□□ -2.14
SLC1A1P43005 ZNF114P1-201ENST00000453500 292 ntBASIC1.66□□□□□ -2.14
SLC1A1P43005 RBBP4P6-201ENST00000508098 202 ntBASIC1.66□□□□□ -2.14
SLC1A1P43005 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.66□□□□□ -2.14
SLC1A1P43005 SNORA43.2-201ENST00000516652 128 ntBASIC1.66□□□□□ -2.14
SLC1A1P43005 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.66□□□□□ -2.14
SLC1A1P43005 AP005639.2-201ENST00000527592 928 ntBASIC1.66□□□□□ -2.14
SLC1A1P43005 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.66□□□□□ -2.14
SLC1A1P43005 AP000873.5-201ENST00000533906 236 ntBASIC1.66□□□□□ -2.14
SLC1A1P43005 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC1.66□□□□□ -2.14
SLC1A1P43005 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC1.66□□□□□ -2.14
SLC1A1P43005 BNIP3P6-201ENST00000549284 499 ntBASIC1.66□□□□□ -2.14
SLC1A1P43005 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC1.66□□□□□ -2.14
SLC1A1P43005 AC002400.1-201ENST00000569310 726 ntBASIC1.66□□□□□ -2.14
SLC1A1P43005 AL353778.1-201ENST00000603149 408 ntBASIC1.66□□□□□ -2.14
SLC1A1P43005 AL078605.1-201ENST00000603529 500 ntBASIC1.66□□□□□ -2.14
SLC1A1P43005 MIR7844-201ENST00000616161 122 ntBASIC1.66□□□□□ -2.14
SLC1A1P43005 AL359314.1-201ENST00000616913 261 ntBASIC1.66□□□□□ -2.14
SLC1A1P43005 AC093648.1-201ENST00000623546 606 ntBASIC1.66□□□□□ -2.14
SLC1A1P43005 AC006026.1-201ENST00000444025 1803 ntBASIC1.66□□□□□ -2.14
SLC1A1P43005 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
SLC1A1P43005 AP000648.3-201ENST00000623539 4507 ntBASIC1.65□□□□□ -2.15
SLC1A1P43005 RNU6-944P-201ENST00000364023 107 ntBASIC1.65□□□□□ -2.15
SLC1A1P43005 RNU5E-5P-201ENST00000365379 116 ntBASIC1.65□□□□□ -2.15
SLC1A1P43005 RNU6-611P-201ENST00000384276 104 ntBASIC1.65□□□□□ -2.15
SLC1A1P43005 SNORA8-201ENST00000384574 139 ntBASIC1.65□□□□□ -2.15
SLC1A1P43005 AL627390.1-201ENST00000396055 340 ntBASIC1.65□□□□□ -2.15
SLC1A1P43005 CBX3P9-201ENST00000402326 552 ntBASIC1.65□□□□□ -2.15
SLC1A1P43005 MIR1283-2-201ENST00000408621 87 ntBASIC1.65□□□□□ -2.15
SLC1A1P43005 RNA5SP390-201ENST00000410191 113 ntBASIC1.65□□□□□ -2.15
SLC1A1P43005 RNA5SP111-201ENST00000411386 101 ntBASIC1.65□□□□□ -2.15
SLC1A1P43005 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
SLC1A1P43005 EEF1A1P40-201ENST00000412883 573 ntBASIC1.65□□□□□ -2.15
SLC1A1P43005 AC244636.1-201ENST00000421152 228 ntBASIC1.65□□□□□ -2.15
SLC1A1P43005 AL593851.1-201ENST00000426171 157 ntBASIC1.65□□□□□ -2.15
SLC1A1P43005 AL356583.2-201ENST00000426536 280 ntBASIC1.65□□□□□ -2.15
SLC1A1P43005 HMGB1P31-201ENST00000437242 427 ntBASIC1.65□□□□□ -2.15
SLC1A1P43005 AC104058.1-201ENST00000448028 297 ntBASIC1.65□□□□□ -2.15
SLC1A1P43005 PRELID3BP1-201ENST00000457142 540 ntBASIC1.65□□□□□ -2.15
SLC1A1P43005 AC006026.2-201ENST00000457376 180 ntBASIC1.65□□□□□ -2.15
SLC1A1P43005 snoU13.26-201ENST00000459452 105 ntBASIC1.65□□□□□ -2.15
SLC1A1P43005 YWHAEP4-201ENST00000505390 198 ntBASIC1.65□□□□□ -2.15
SLC1A1P43005 AC096745.1-201ENST00000509945 370 ntBASIC1.65□□□□□ -2.15
SLC1A1P43005 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.65□□□□□ -2.15
SLC1A1P43005 RNU1-86P-201ENST00000516108 154 ntBASIC1.65□□□□□ -2.15
SLC1A1P43005 RNU1-107P-201ENST00000516617 154 ntBASIC1.65□□□□□ -2.15
SLC1A1P43005 RNU6-295P-201ENST00000516901 104 ntBASIC1.65□□□□□ -2.15
SLC1A1P43005 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.65□□□□□ -2.15
SLC1A1P43005 DUXAP5-201ENST00000529668 529 ntBASIC1.65□□□□□ -2.15
SLC1A1P43005 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.65□□□□□ -2.15
SLC1A1P43005 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.65□□□□□ -2.15
SLC1A1P43005 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC1.65□□□□□ -2.15
SLC1A1P43005 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
SLC1A1P43005 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC1.65□□□□□ -2.15
SLC1A1P43005 AC008521.1-201ENST00000587471 187 ntBASIC1.65□□□□□ -2.15
SLC1A1P43005 AC112191.3-201ENST00000604371 277 ntBASIC1.65□□□□□ -2.15
SLC1A1P43005 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC1.65□□□□□ -2.15
SLC1A1P43005 MIR8081-201ENST00000611533 95 ntBASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms