Protein–RNA interactions for Protein: P39060

COL18A1, Collagen alpha-1(XVIII) chain, humanhuman

Predictions only

Length 1,754 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1P39060 DUXAP1-201ENST00000556632 463 ntBASIC1.35□□□□□ -2.19
COL18A1P39060 AC012435.1-202ENST00000568772 240 ntBASIC1.35□□□□□ -2.19
COL18A1P39060 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.35□□□□□ -2.19
COL18A1P39060 MTND3P19-201ENST00000603825 345 ntBASIC1.35□□□□□ -2.19
COL18A1P39060 AC087045.1-201ENST00000605856 382 ntBASIC1.35□□□□□ -2.19
COL18A1P39060 AC108706.1-201ENST00000611053 297 ntBASIC1.35□□□□□ -2.19
COL18A1P39060 AC098657.3-201ENST00000620434 263 ntBASIC1.35□□□□□ -2.19
COL18A1P39060 AC138627.2-201ENST00000624202 601 ntBASIC1.35□□□□□ -2.19
COL18A1P39060 AC008133.2-201ENST00000624540 351 ntBASIC1.35□□□□□ -2.19
COL18A1P39060 AL442644.1-201ENST00000454390 3105 ntBASIC1.35□□□□□ -2.19
COL18A1P39060 SNORD114-19-201ENST00000363072 75 ntBASIC1.34□□□□□ -2.19
COL18A1P39060 Y_RNA.458-201ENST00000384240 102 ntBASIC1.34□□□□□ -2.19
COL18A1P39060 AL355143.1-201ENST00000407101 841 ntBASIC1.34□□□□□ -2.19
COL18A1P39060 ELOCP17-201ENST00000414751 326 ntBASIC1.34□□□□□ -2.19
COL18A1P39060 ELOCP9-201ENST00000418624 239 ntBASIC1.34□□□□□ -2.19
COL18A1P39060 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC1.34□□□□□ -2.19
COL18A1P39060 MTCO2P21-201ENST00000419780 677 ntBASIC1.34□□□□□ -2.19
COL18A1P39060 AC006366.1-201ENST00000422002 759 ntBASIC1.34□□□□□ -2.19
COL18A1P39060 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC1.34□□□□□ -2.19
COL18A1P39060 RPS27P1-201ENST00000450552 247 ntBASIC1.34□□□□□ -2.19
COL18A1P39060 ZNF736P5Y-201ENST00000451173 805 ntBASIC1.34□□□□□ -2.19
COL18A1P39060 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.34□□□□□ -2.19
COL18A1P39060 AC107032.1-201ENST00000485945 480 ntBASIC1.34□□□□□ -2.19
COL18A1P39060 AKIRIN2P1-201ENST00000505898 352 ntBASIC1.34□□□□□ -2.19
COL18A1P39060 SMURF2P1-201ENST00000514992 481 ntBASIC1.34□□□□□ -2.19
COL18A1P39060 AC112206.4-201ENST00000515142 405 ntBASIC1.34□□□□□ -2.19
COL18A1P39060 AP005597.4-201ENST00000526762 229 ntBASIC1.34□□□□□ -2.19
COL18A1P39060 AL158042.1-201ENST00000605338 460 ntBASIC1.34□□□□□ -2.19
COL18A1P39060 AL020996.3-201ENST00000606617 222 ntBASIC1.34□□□□□ -2.19
COL18A1P39060 AC080013.3-201ENST00000606839 578 ntBASIC1.34□□□□□ -2.19
COL18A1P39060 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC1.34□□□□□ -2.19
COL18A1P39060 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC1.34□□□□□ -2.19
COL18A1P39060 AP000720.1-201ENST00000625091 483 ntBASIC1.34□□□□□ -2.19
COL18A1P39060 SNORA16B-201ENST00000364674 135 ntBASIC1.34□□□□□ -2.2
COL18A1P39060 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.34□□□□□ -2.2
COL18A1P39060 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC1.34□□□□□ -2.2
COL18A1P39060 AL356432.1-201ENST00000405809 419 ntBASIC1.34□□□□□ -2.2
COL18A1P39060 AL353621.1-201ENST00000418219 243 ntBASIC1.34□□□□□ -2.2
COL18A1P39060 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC1.34□□□□□ -2.2
COL18A1P39060 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC1.34□□□□□ -2.2
COL18A1P39060 AL117351.1-201ENST00000438864 766 ntBASIC1.34□□□□□ -2.2
COL18A1P39060 AC012308.1-201ENST00000451232 178 ntBASIC1.34□□□□□ -2.2
COL18A1P39060 FCF1P6-201ENST00000456841 595 ntBASIC1.34□□□□□ -2.2
COL18A1P39060 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC1.34□□□□□ -2.2
COL18A1P39060 AC023194.1-201ENST00000493084 308 ntBASIC1.34□□□□□ -2.2
COL18A1P39060 LAMTOR3P2-201ENST00000504479 232 ntBASIC1.34□□□□□ -2.2
COL18A1P39060 RNU6-678P-201ENST00000516832 109 ntBASIC1.34□□□□□ -2.2
COL18A1P39060 RNA5SP137-201ENST00000516833 135 ntBASIC1.34□□□□□ -2.2
COL18A1P39060 AC109329.1-201ENST00000518744 317 ntBASIC1.34□□□□□ -2.2
COL18A1P39060 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC1.34□□□□□ -2.2
COL18A1P39060 AC073544.2-201ENST00000601155 540 ntBASIC1.34□□□□□ -2.2
COL18A1P39060 AL365204.3-201ENST00000612448 685 ntBASIC1.34□□□□□ -2.2
COL18A1P39060 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.34□□□□□ -2.2
COL18A1P39060 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.34□□□□□ -2.2
COL18A1P39060 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.33□□□□□ -2.2
COL18A1P39060 RNU6-898P-201ENST00000365627 104 ntBASIC1.33□□□□□ -2.2
COL18A1P39060 RNU6-997P-201ENST00000384725 107 ntBASIC1.33□□□□□ -2.2
COL18A1P39060 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
COL18A1P39060 RNU6-817P-201ENST00000391083 104 ntBASIC1.33□□□□□ -2.2
COL18A1P39060 PIGPP2-201ENST00000411569 458 ntBASIC1.33□□□□□ -2.2
COL18A1P39060 AC078974.1-201ENST00000411597 223 ntBASIC1.33□□□□□ -2.2
COL18A1P39060 OR51A5P-201ENST00000415429 942 ntBASIC1.33□□□□□ -2.2
COL18A1P39060 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC1.33□□□□□ -2.2
COL18A1P39060 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.33□□□□□ -2.2
COL18A1P39060 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC1.33□□□□□ -2.2
COL18A1P39060 USP9YP24-201ENST00000434374 697 ntBASIC1.33□□□□□ -2.2
COL18A1P39060 USP9YP17-201ENST00000444617 696 ntBASIC1.33□□□□□ -2.2
COL18A1P39060 PTENP1-201ENST00000447117 1215 ntBASIC1.33□□□□□ -2.2
COL18A1P39060 AC093899.1-201ENST00000457984 376 ntBASIC1.33□□□□□ -2.2
COL18A1P39060 RNU2-10P-201ENST00000516375 211 ntBASIC1.33□□□□□ -2.2
COL18A1P39060 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC1.33□□□□□ -2.2
COL18A1P39060 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.33□□□□□ -2.2
COL18A1P39060 AC026271.5-201ENST00000577873 130 ntBASIC1.33□□□□□ -2.2
COL18A1P39060 MIR1273C-201ENST00000578669 77 ntBASIC1.33□□□□□ -2.2
COL18A1P39060 MIR3146-201ENST00000580367 79 ntBASIC1.33□□□□□ -2.2
COL18A1P39060 AP001981.2-201ENST00000603241 418 ntBASIC1.33□□□□□ -2.2
COL18A1P39060 AL358072.1-201ENST00000604156 575 ntBASIC1.33□□□□□ -2.2
COL18A1P39060 AC112191.3-201ENST00000604371 277 ntBASIC1.33□□□□□ -2.2
COL18A1P39060 AC009269.6-201ENST00000621778 588 ntBASIC1.33□□□□□ -2.2
COL18A1P39060 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
COL18A1P39060 RNY3P13-201ENST00000365542 102 ntBASIC1.32□□□□□ -2.2
COL18A1P39060 SNORA4.3-201ENST00000365564 137 ntBASIC1.32□□□□□ -2.2
COL18A1P39060 RNU6-769P-201ENST00000384407 104 ntBASIC1.32□□□□□ -2.2
COL18A1P39060 AL591212.2-201ENST00000433923 257 ntBASIC1.32□□□□□ -2.2
COL18A1P39060 AL353689.1-201ENST00000438895 199 ntBASIC1.32□□□□□ -2.2
COL18A1P39060 GDI2P2-201ENST00000445131 608 ntBASIC1.32□□□□□ -2.2
COL18A1P39060 KATNBL1P6-201ENST00000453433 915 ntBASIC1.32□□□□□ -2.2
COL18A1P39060 RPL23AP3-201ENST00000453844 468 ntBASIC1.32□□□□□ -2.2
COL18A1P39060 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
COL18A1P39060 AC023050.2-201ENST00000544968 387 ntBASIC1.32□□□□□ -2.2
COL18A1P39060 AC112187.2-201ENST00000604345 283 ntBASIC1.32□□□□□ -2.2
COL18A1P39060 AC211469.2-201ENST00000605461 205 ntBASIC1.32□□□□□ -2.2
COL18A1P39060 Z99571.1-201ENST00000636677 394 ntBASIC1.32□□□□□ -2.2
COL18A1P39060 AC099654.9-201ENST00000637055 678 ntBASIC1.32□□□□□ -2.2
COL18A1P39060 MTND5P42-201ENST00000637720 498 ntBASIC1.32□□□□□ -2.2
COL18A1P39060 AL445984.1-201ENST00000637834 659 ntBASIC1.32□□□□□ -2.2
COL18A1P39060 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC1.32□□□□□ -2.2
COL18A1P39060 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.32□□□□□ -2.2
COL18A1P39060 RNU1-62P-201ENST00000362599 164 ntBASIC1.31□□□□□ -2.2
COL18A1P39060 U8.14-201ENST00000390843 143 ntBASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms