Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC5.21□□□□□ -1.58
CLCN1P35523 POC1B-211ENST00000549504 581 ntTSL 5 BASIC5.21□□□□□ -1.58
CLCN1P35523 AC021739.1-201ENST00000559631 174 ntBASIC5.21□□□□□ -1.58
CLCN1P35523 AP002799.1-201ENST00000623552 423 ntBASIC5.21□□□□□ -1.58
CLCN1P35523 MIR3674-201ENST00000636576 68 ntBASIC5.21□□□□□ -1.58
CLCN1P35523 ANKRD30BP1-201ENST00000451052 2186 ntBASIC5.21□□□□□ -1.58
CLCN1P35523 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC5.2□□□□□ -1.58
CLCN1P35523 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.2□□□□□ -1.58
CLCN1P35523 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CLCN1P35523 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CLCN1P35523 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
CLCN1P35523 RNA5SP305-201ENST00000362665 119 ntBASIC5.2□□□□□ -1.58
CLCN1P35523 Y_RNA.121-201ENST00000363309 113 ntBASIC5.2□□□□□ -1.58
CLCN1P35523 RNU6-799P-201ENST00000363567 107 ntBASIC5.2□□□□□ -1.58
CLCN1P35523 RNA5SP322-201ENST00000363617 119 ntBASIC5.2□□□□□ -1.58
CLCN1P35523 RNU4-84P-201ENST00000364200 139 ntBASIC5.2□□□□□ -1.58
CLCN1P35523 EI24P2-201ENST00000397776 1076 ntBASIC5.2□□□□□ -1.58
CLCN1P35523 AC009963.1-201ENST00000417265 157 ntBASIC5.2□□□□□ -1.58
CLCN1P35523 AC099548.1-201ENST00000421443 426 ntBASIC5.2□□□□□ -1.58
CLCN1P35523 AC092017.2-201ENST00000427600 362 ntBASIC5.2□□□□□ -1.58
CLCN1P35523 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC5.2□□□□□ -1.58
CLCN1P35523 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC5.2□□□□□ -1.58
CLCN1P35523 ACA59.2-201ENST00000517061 156 ntBASIC5.2□□□□□ -1.58
CLCN1P35523 CARD18-203ENST00000532895 422 ntTSL 2 BASIC5.2□□□□□ -1.58
CLCN1P35523 AC009127.3-201ENST00000570531 403 ntBASIC5.2□□□□□ -1.58
CLCN1P35523 AC006380.1-201ENST00000603598 186 ntBASIC5.2□□□□□ -1.58
CLCN1P35523 Mico1.1-201ENST00000611698 204 ntBASIC5.2□□□□□ -1.58
CLCN1P35523 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
CLCN1P35523 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC5.2□□□□□ -1.58
CLCN1P35523 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CLCN1P35523 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC5.2□□□□□ -1.58
CLCN1P35523 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
CLCN1P35523 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC5.19□□□□□ -1.58
CLCN1P35523 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CLCN1P35523 Y_RNA.75-201ENST00000362927 97 ntBASIC5.19□□□□□ -1.58
CLCN1P35523 RNA5SP189-201ENST00000364920 115 ntBASIC5.19□□□□□ -1.58
CLCN1P35523 SNORA22C-201ENST00000384614 134 ntBASIC5.19□□□□□ -1.58
CLCN1P35523 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
CLCN1P35523 AL645927.1-201ENST00000396783 406 ntBASIC5.19□□□□□ -1.58
CLCN1P35523 MIR208B-201ENST00000401172 77 ntBASIC5.19□□□□□ -1.58
CLCN1P35523 RNU6ATAC19P-201ENST00000408096 110 ntBASIC5.19□□□□□ -1.58
CLCN1P35523 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC5.19□□□□□ -1.58
CLCN1P35523 AL645608.4-201ENST00000423619 154 ntBASIC5.19□□□□□ -1.58
CLCN1P35523 RPL12P3-201ENST00000440080 396 ntBASIC5.19□□□□□ -1.58
CLCN1P35523 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC5.19□□□□□ -1.58
CLCN1P35523 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC5.19□□□□□ -1.58
CLCN1P35523 AC005840.1-201ENST00000498412 377 ntBASIC5.19□□□□□ -1.58
CLCN1P35523 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CLCN1P35523 AC005921.1-201ENST00000510589 286 ntBASIC5.19□□□□□ -1.58
CLCN1P35523 SNORD116-25-201ENST00000516517 92 ntBASIC5.19□□□□□ -1.58
CLCN1P35523 AC115990.1-201ENST00000526957 301 ntBASIC5.19□□□□□ -1.58
CLCN1P35523 SNORA74C-1-201ENST00000580726 201 ntBASIC5.19□□□□□ -1.58
CLCN1P35523 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC5.19□□□□□ -1.58
CLCN1P35523 AL356575.1-201ENST00000603008 283 ntBASIC5.19□□□□□ -1.58
CLCN1P35523 AL162713.1-201ENST00000604480 262 ntBASIC5.19□□□□□ -1.58
CLCN1P35523 AC091953.5-201ENST00000622919 233 ntBASIC5.19□□□□□ -1.58
CLCN1P35523 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
CLCN1P35523 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC5.19□□□□□ -1.58
CLCN1P35523 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
CLCN1P35523 AL133383.2-201ENST00000622958 2336 ntBASIC5.19□□□□□ -1.58
CLCN1P35523 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CLCN1P35523 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CLCN1P35523 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC5.19□□□□□ -1.58
CLCN1P35523 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
CLCN1P35523 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
CLCN1P35523 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC5.18□□□□□ -1.58
CLCN1P35523 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
CLCN1P35523 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC5.18□□□□□ -1.58
CLCN1P35523 USP8P1-201ENST00000494673 3183 ntBASIC5.18□□□□□ -1.58
CLCN1P35523 Y_RNA.329-201ENST00000365209 107 ntBASIC5.18□□□□□ -1.58
CLCN1P35523 RNU6-622P-201ENST00000384272 103 ntBASIC5.18□□□□□ -1.58
CLCN1P35523 PSMD10P3-201ENST00000437000 448 ntBASIC5.18□□□□□ -1.58
CLCN1P35523 RN7SL808P-201ENST00000496066 299 ntBASIC5.18□□□□□ -1.58
CLCN1P35523 HMGN2P6-201ENST00000551091 273 ntBASIC5.18□□□□□ -1.58
CLCN1P35523 CYP4A27P-201ENST00000567218 190 ntBASIC5.18□□□□□ -1.58
CLCN1P35523 SMCR2_2.1-201ENST00000619783 161 ntBASIC5.18□□□□□ -1.58
CLCN1P35523 NOL8P1-201ENST00000508336 3529 ntBASIC5.18□□□□□ -1.58
CLCN1P35523 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC5.18□□□□□ -1.58
CLCN1P35523 ZNF962P-201ENST00000443465 3140 ntBASIC5.18□□□□□ -1.58
CLCN1P35523 AL136164.3-201ENST00000624429 3978 ntBASIC5.18□□□□□ -1.58
CLCN1P35523 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CLCN1P35523 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
CLCN1P35523 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC5.17□□□□□ -1.58
CLCN1P35523 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC5.17□□□□□ -1.58
CLCN1P35523 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC5.17□□□□□ -1.58
CLCN1P35523 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CLCN1P35523 RNU1-62P-201ENST00000362599 164 ntBASIC5.17□□□□□ -1.58
CLCN1P35523 RNA5SP123-201ENST00000363244 119 ntBASIC5.17□□□□□ -1.58
CLCN1P35523 RNU6-151P-201ENST00000364158 107 ntBASIC5.17□□□□□ -1.58
CLCN1P35523 RNU6-487P-201ENST00000365430 104 ntBASIC5.17□□□□□ -1.58
CLCN1P35523 MIR3074-201ENST00000384885 81 ntBASIC5.17□□□□□ -1.58
CLCN1P35523 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
CLCN1P35523 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
CLCN1P35523 RPL23AP27-201ENST00000415161 451 ntBASIC5.17□□□□□ -1.58
CLCN1P35523 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC5.17□□□□□ -1.58
CLCN1P35523 RPS20P10-201ENST00000451209 253 ntBASIC5.17□□□□□ -1.58
CLCN1P35523 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CLCN1P35523 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
CLCN1P35523 AC084357.1-201ENST00000473404 255 ntBASIC5.17□□□□□ -1.58
CLCN1P35523 AC006517.1-201ENST00000480485 328 ntBASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms