Protein–RNA interactions for Protein: P35052

GPC1, Glypican-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1P35052 AC127455.1-201ENST00000565496 145 ntBASIC4.48□□□□□ -1.69
GPC1P35052 AC024614.2-201ENST00000577584 372 ntBASIC4.48□□□□□ -1.69
GPC1P35052 AL162713.1-201ENST00000604480 262 ntBASIC4.48□□□□□ -1.69
GPC1P35052 uc_338.18-201ENST00000615451 175 ntBASIC4.48□□□□□ -1.69
GPC1P35052 MIR7155-201ENST00000615925 56 ntBASIC4.48□□□□□ -1.69
GPC1P35052 MIR6844-201ENST00000637122 62 ntBASIC4.48□□□□□ -1.69
GPC1P35052 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.48□□□□□ -1.69
GPC1P35052 INTS6P1-201ENST00000504674 2530 ntBASIC4.48□□□□□ -1.69
GPC1P35052 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.48□□□□□ -1.69
GPC1P35052 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
GPC1P35052 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC4.47□□□□□ -1.69
GPC1P35052 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
GPC1P35052 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
GPC1P35052 RNU1-108P-201ENST00000362556 161 ntBASIC4.47□□□□□ -1.69
GPC1P35052 RNU1-94P-201ENST00000362627 173 ntBASIC4.47□□□□□ -1.69
GPC1P35052 RNU6-884P-201ENST00000363889 107 ntBASIC4.47□□□□□ -1.69
GPC1P35052 RNU6-454P-201ENST00000364292 107 ntBASIC4.47□□□□□ -1.69
GPC1P35052 Y_RNA.415-201ENST00000384012 112 ntBASIC4.47□□□□□ -1.69
GPC1P35052 SNORA18.3-201ENST00000384122 132 ntBASIC4.47□□□□□ -1.69
GPC1P35052 Y_RNA.563-201ENST00000384707 108 ntBASIC4.47□□□□□ -1.69
GPC1P35052 U3.30-201ENST00000391308 210 ntBASIC4.47□□□□□ -1.69
GPC1P35052 MIR208B-201ENST00000401172 77 ntBASIC4.47□□□□□ -1.69
GPC1P35052 RPS26P2-201ENST00000440331 348 ntBASIC4.47□□□□□ -1.69
GPC1P35052 NDUFS5P3-201ENST00000450668 321 ntBASIC4.47□□□□□ -1.69
GPC1P35052 AC090525.1-201ENST00000479116 478 ntBASIC4.47□□□□□ -1.69
GPC1P35052 RN7SL826P-201ENST00000479724 288 ntBASIC4.47□□□□□ -1.69
GPC1P35052 RPL23AP70-201ENST00000483361 460 ntBASIC4.47□□□□□ -1.69
GPC1P35052 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC4.47□□□□□ -1.69
GPC1P35052 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.47□□□□□ -1.69
GPC1P35052 RN7SKP179-201ENST00000516126 217 ntBASIC4.47□□□□□ -1.69
GPC1P35052 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.47□□□□□ -1.69
GPC1P35052 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
GPC1P35052 RN7SL176P-201ENST00000580352 264 ntBASIC4.47□□□□□ -1.69
GPC1P35052 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.47□□□□□ -1.69
GPC1P35052 MIR6730-201ENST00000622213 67 ntBASIC4.47□□□□□ -1.69
GPC1P35052 AL354798.1-201ENST00000622505 329 ntBASIC4.47□□□□□ -1.69
GPC1P35052 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.47□□□□□ -1.69
GPC1P35052 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC4.47□□□□□ -1.69
GPC1P35052 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.47□□□□□ -1.69
GPC1P35052 AL136964.1-201ENST00000622038 2990 ntBASIC4.47□□□□□ -1.69
GPC1P35052 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
GPC1P35052 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
GPC1P35052 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
GPC1P35052 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.69
GPC1P35052 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.46□□□□□ -1.7
GPC1P35052 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.46□□□□□ -1.7
GPC1P35052 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
GPC1P35052 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
GPC1P35052 RNU1-83P-201ENST00000363426 164 ntBASIC4.46□□□□□ -1.7
GPC1P35052 U3.15-201ENST00000365398 212 ntBASIC4.46□□□□□ -1.7
GPC1P35052 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
GPC1P35052 RNU6-643P-201ENST00000384018 107 ntBASIC4.46□□□□□ -1.7
GPC1P35052 RNU6-217P-201ENST00000384164 104 ntBASIC4.46□□□□□ -1.7
GPC1P35052 MIR15B-201ENST00000385045 98 ntBASIC4.46□□□□□ -1.7
GPC1P35052 MIR493-201ENST00000385254 89 ntBASIC4.46□□□□□ -1.7
GPC1P35052 RNU6-1197P-201ENST00000391183 107 ntBASIC4.46□□□□□ -1.7
GPC1P35052 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
GPC1P35052 BX510359.2-201ENST00000417920 305 ntBASIC4.46□□□□□ -1.7
GPC1P35052 AC091868.1-201ENST00000508746 304 ntBASIC4.46□□□□□ -1.7
GPC1P35052 AC008033.2-201ENST00000542626 177 ntBASIC4.46□□□□□ -1.7
GPC1P35052 MTND5P34-201ENST00000568888 325 ntBASIC4.46□□□□□ -1.7
GPC1P35052 AC009163.5-201ENST00000575421 637 ntBASIC4.46□□□□□ -1.7
GPC1P35052 MIR5699-201ENST00000578903 90 ntBASIC4.46□□□□□ -1.7
GPC1P35052 MIR3613-201ENST00000579844 87 ntBASIC4.46□□□□□ -1.7
GPC1P35052 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.46□□□□□ -1.7
GPC1P35052 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.46□□□□□ -1.7
GPC1P35052 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.46□□□□□ -1.7
GPC1P35052 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
GPC1P35052 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC4.46□□□□□ -1.7
GPC1P35052 MIR3529-201ENST00000637713 78 ntBASIC4.46□□□□□ -1.7
GPC1P35052 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
GPC1P35052 DHX9P1-201ENST00000436565 3076 ntBASIC4.46□□□□□ -1.7
GPC1P35052 AL672167.1-203ENST00000641299 2975 ntBASIC4.46□□□□□ -1.7
GPC1P35052 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
GPC1P35052 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.46□□□□□ -1.7
GPC1P35052 ZNF702P-202ENST00000434269 1966 ntBASIC4.45□□□□□ -1.7
GPC1P35052 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
GPC1P35052 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.7
GPC1P35052 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
GPC1P35052 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
GPC1P35052 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.45□□□□□ -1.7
GPC1P35052 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
GPC1P35052 RNU1-62P-201ENST00000362599 164 ntBASIC4.45□□□□□ -1.7
GPC1P35052 RN7SKP104-201ENST00000362605 328 ntBASIC4.45□□□□□ -1.7
GPC1P35052 SNORA22-201ENST00000383907 134 ntBASIC4.45□□□□□ -1.7
GPC1P35052 SNORA72.4-201ENST00000384174 132 ntBASIC4.45□□□□□ -1.7
GPC1P35052 Y_RNA.521-201ENST00000384560 114 ntBASIC4.45□□□□□ -1.7
GPC1P35052 MIR616-201ENST00000385293 97 ntBASIC4.45□□□□□ -1.7
GPC1P35052 MT-TT-201ENST00000387460 66 ntBASIC4.45□□□□□ -1.7
GPC1P35052 SNORA26.3-201ENST00000391119 136 ntBASIC4.45□□□□□ -1.7
GPC1P35052 AL645927.1-201ENST00000396783 406 ntBASIC4.45□□□□□ -1.7
GPC1P35052 RPS27P18-201ENST00000431701 247 ntBASIC4.45□□□□□ -1.7
GPC1P35052 PSMD10P3-201ENST00000437000 448 ntBASIC4.45□□□□□ -1.7
GPC1P35052 HMGB3P8-201ENST00000449709 577 ntBASIC4.45□□□□□ -1.7
GPC1P35052 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC4.45□□□□□ -1.7
GPC1P35052 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC4.45□□□□□ -1.7
GPC1P35052 Y_RNA.709-201ENST00000516952 92 ntBASIC4.45□□□□□ -1.7
GPC1P35052 CKS1BP7-201ENST00000522230 235 ntBASIC4.45□□□□□ -1.7
GPC1P35052 CYCSP26-201ENST00000534107 320 ntBASIC4.45□□□□□ -1.7
GPC1P35052 SNRPGP20-201ENST00000604477 205 ntBASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms