Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC3.38□□□□□ -1.87
NR4A1P22736 AL590135.1-201ENST00000422215 156 ntBASIC3.38□□□□□ -1.87
NR4A1P22736 AC096920.1-201ENST00000423991 241 ntBASIC3.38□□□□□ -1.87
NR4A1P22736 AC004383.1-201ENST00000438135 289 ntBASIC3.38□□□□□ -1.87
NR4A1P22736 SNORA71B-202ENST00000439232 272 ntBASIC3.38□□□□□ -1.87
NR4A1P22736 RPS29P7-201ENST00000439662 171 ntBASIC3.38□□□□□ -1.87
NR4A1P22736 AC079354.2-201ENST00000453523 154 ntBASIC3.38□□□□□ -1.87
NR4A1P22736 AC006539.3-201ENST00000454258 129 ntBASIC3.38□□□□□ -1.87
NR4A1P22736 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC3.38□□□□□ -1.87
NR4A1P22736 AC067942.3-201ENST00000512025 362 ntBASIC3.38□□□□□ -1.87
NR4A1P22736 Y_RNA.673-201ENST00000516306 88 ntBASIC3.38□□□□□ -1.87
NR4A1P22736 CYCSP30-201ENST00000546447 172 ntBASIC3.38□□□□□ -1.87
NR4A1P22736 AC005476.1-201ENST00000554427 397 ntBASIC3.38□□□□□ -1.87
NR4A1P22736 TGIF1P1-201ENST00000558095 802 ntBASIC3.38□□□□□ -1.87
NR4A1P22736 AC104581.2-201ENST00000572227 430 ntBASIC3.38□□□□□ -1.87
NR4A1P22736 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.38□□□□□ -1.87
NR4A1P22736 RNU6-227P-201ENST00000362865 103 ntBASIC3.37□□□□□ -1.87
NR4A1P22736 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC3.37□□□□□ -1.87
NR4A1P22736 Y_RNA.416-201ENST00000384014 113 ntBASIC3.37□□□□□ -1.87
NR4A1P22736 Y_RNA.785-201ENST00000384290 109 ntBASIC3.37□□□□□ -1.87
NR4A1P22736 RNU6-166P-201ENST00000384371 107 ntBASIC3.37□□□□□ -1.87
NR4A1P22736 RPS29P13-201ENST00000402041 169 ntBASIC3.37□□□□□ -1.87
NR4A1P22736 RNU2-25P-201ENST00000411041 191 ntBASIC3.37□□□□□ -1.87
NR4A1P22736 RNU6-130P-201ENST00000411112 103 ntBASIC3.37□□□□□ -1.87
NR4A1P22736 RNU4-61P-201ENST00000411243 107 ntBASIC3.37□□□□□ -1.87
NR4A1P22736 MTND3P9-201ENST00000429526 346 ntBASIC3.37□□□□□ -1.87
NR4A1P22736 BX679664.1-201ENST00000434429 253 ntBASIC3.37□□□□□ -1.87
NR4A1P22736 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.37□□□□□ -1.87
NR4A1P22736 RPS4XP22-201ENST00000480755 780 ntBASIC3.37□□□□□ -1.87
NR4A1P22736 HMGB1P35-201ENST00000503360 598 ntBASIC3.37□□□□□ -1.87
NR4A1P22736 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC3.37□□□□□ -1.87
NR4A1P22736 RNU6-377P-201ENST00000515965 102 ntBASIC3.37□□□□□ -1.87
NR4A1P22736 SNORA31.19-201ENST00000517079 126 ntBASIC3.37□□□□□ -1.87
NR4A1P22736 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.37□□□□□ -1.87
NR4A1P22736 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.37□□□□□ -1.87
NR4A1P22736 AL442163.3-201ENST00000554110 156 ntBASIC3.37□□□□□ -1.87
NR4A1P22736 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
NR4A1P22736 MIR5685-201ENST00000579080 79 ntBASIC3.37□□□□□ -1.87
NR4A1P22736 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.37□□□□□ -1.87
NR4A1P22736 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.37□□□□□ -1.87
NR4A1P22736 AC012433.1-201ENST00000588916 398 ntBASIC3.37□□□□□ -1.87
NR4A1P22736 AC090132.2-201ENST00000615881 347 ntBASIC3.37□□□□□ -1.87
NR4A1P22736 AC027309.3-201ENST00000623419 351 ntBASIC3.37□□□□□ -1.87
NR4A1P22736 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.37□□□□□ -1.87
NR4A1P22736 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.37□□□□□ -1.87
NR4A1P22736 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.37□□□□□ -1.87
NR4A1P22736 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
NR4A1P22736 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
NR4A1P22736 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.36□□□□□ -1.87
NR4A1P22736 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.36□□□□□ -1.87
NR4A1P22736 U3.6-201ENST00000363622 211 ntBASIC3.36□□□□□ -1.87
NR4A1P22736 Y_RNA.458-201ENST00000384240 102 ntBASIC3.36□□□□□ -1.87
NR4A1P22736 SNORA12.2-201ENST00000391040 156 ntBASIC3.36□□□□□ -1.87
NR4A1P22736 MIR190B-201ENST00000401119 79 ntBASIC3.36□□□□□ -1.87
NR4A1P22736 SNORA3.3-201ENST00000408712 125 ntBASIC3.36□□□□□ -1.87
NR4A1P22736 RNU6-121P-201ENST00000410525 99 ntBASIC3.36□□□□□ -1.87
NR4A1P22736 RNU6-1203P-201ENST00000410703 110 ntBASIC3.36□□□□□ -1.87
NR4A1P22736 RNU2-71P-201ENST00000411395 189 ntBASIC3.36□□□□□ -1.87
NR4A1P22736 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
NR4A1P22736 AC007919.1-201ENST00000429380 217 ntBASIC3.36□□□□□ -1.87
NR4A1P22736 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC3.36□□□□□ -1.87
NR4A1P22736 AL078601.1-201ENST00000444542 271 ntBASIC3.36□□□□□ -1.87
NR4A1P22736 snoU13.4-201ENST00000458916 104 ntBASIC3.36□□□□□ -1.87
NR4A1P22736 RPS29P27-201ENST00000463711 170 ntBASIC3.36□□□□□ -1.87
NR4A1P22736 AC010401.1-201ENST00000463867 348 ntBASIC3.36□□□□□ -1.87
NR4A1P22736 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.36□□□□□ -1.87
NR4A1P22736 RN7SL323P-201ENST00000494712 295 ntBASIC3.36□□□□□ -1.87
NR4A1P22736 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.36□□□□□ -1.87
NR4A1P22736 HSPE1P5-201ENST00000561489 272 ntBASIC3.36□□□□□ -1.87
NR4A1P22736 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.36□□□□□ -1.87
NR4A1P22736 AC006557.5-201ENST00000603126 811 ntBASIC3.36□□□□□ -1.87
NR4A1P22736 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.36□□□□□ -1.87
NR4A1P22736 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.36□□□□□ -1.87
NR4A1P22736 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
NR4A1P22736 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
NR4A1P22736 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.35□□□□□ -1.87
NR4A1P22736 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC3.35□□□□□ -1.87
NR4A1P22736 Y_RNA.84-201ENST00000363011 104 ntBASIC3.35□□□□□ -1.87
NR4A1P22736 Y_RNA.105-201ENST00000363182 111 ntBASIC3.35□□□□□ -1.87
NR4A1P22736 RNU5E-7P-201ENST00000365290 117 ntBASIC3.35□□□□□ -1.87
NR4A1P22736 RNU2-68P-201ENST00000410878 191 ntBASIC3.35□□□□□ -1.87
NR4A1P22736 AC017079.2-201ENST00000416102 485 ntBASIC3.35□□□□□ -1.87
NR4A1P22736 RPL21P38-201ENST00000418090 167 ntBASIC3.35□□□□□ -1.87
NR4A1P22736 AC007560.1-201ENST00000426912 237 ntBASIC3.35□□□□□ -1.87
NR4A1P22736 SDAD1P3-201ENST00000427380 333 ntBASIC3.35□□□□□ -1.87
NR4A1P22736 AL513124.1-201ENST00000450410 614 ntBASIC3.35□□□□□ -1.87
NR4A1P22736 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.35□□□□□ -1.87
NR4A1P22736 AC092798.1-201ENST00000458542 409 ntBASIC3.35□□□□□ -1.87
NR4A1P22736 RPL23AP62-201ENST00000463396 453 ntBASIC3.35□□□□□ -1.87
NR4A1P22736 HMGB3P17-201ENST00000504195 649 ntBASIC3.35□□□□□ -1.87
NR4A1P22736 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.35□□□□□ -1.87
NR4A1P22736 RNU7-175P-201ENST00000515915 61 ntBASIC3.35□□□□□ -1.87
NR4A1P22736 RNU6-138P-201ENST00000515952 107 ntBASIC3.35□□□□□ -1.87
NR4A1P22736 SNORA31.8-201ENST00000516327 108 ntBASIC3.35□□□□□ -1.87
NR4A1P22736 RNU6-572P-201ENST00000516724 80 ntBASIC3.35□□□□□ -1.87
NR4A1P22736 RNU6-182P-201ENST00000516970 105 ntBASIC3.35□□□□□ -1.87
NR4A1P22736 RNU6-111P-201ENST00000517179 105 ntBASIC3.35□□□□□ -1.87
NR4A1P22736 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC3.35□□□□□ -1.87
NR4A1P22736 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.35□□□□□ -1.87
NR4A1P22736 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 125.6 ms