Protein–RNA interactions for Protein: P22090

RPS4Y1, 40S ribosomal protein S4, Y isoform 1, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4Y1P22090 AL157871.3-201ENST00000557231 293 ntBASIC0.98□□□□□ -2.25
RPS4Y1P22090 MTCYBP33-201ENST00000575007 1130 ntBASIC0.98□□□□□ -2.25
RPS4Y1P22090 AC012065.4-201ENST00000602445 679 ntBASIC0.98□□□□□ -2.25
RPS4Y1P22090 AL596327.1-201ENST00000603629 213 ntBASIC0.98□□□□□ -2.25
RPS4Y1P22090 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC0.98□□□□□ -2.25
RPS4Y1P22090 AL355472.4-201ENST00000610233 626 ntBASIC0.98□□□□□ -2.25
RPS4Y1P22090 AP000943.4-201ENST00000622912 357 ntBASIC0.98□□□□□ -2.25
RPS4Y1P22090 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
RPS4Y1P22090 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
RPS4Y1P22090 RNU6-655P-201ENST00000362858 107 ntBASIC0.97□□□□□ -2.25
RPS4Y1P22090 Y_RNA.99-201ENST00000363138 105 ntBASIC0.97□□□□□ -2.25
RPS4Y1P22090 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC0.97□□□□□ -2.25
RPS4Y1P22090 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC0.97□□□□□ -2.25
RPS4Y1P22090 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC0.97□□□□□ -2.25
RPS4Y1P22090 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC0.97□□□□□ -2.25
RPS4Y1P22090 CBX3P9-201ENST00000402326 552 ntBASIC0.97□□□□□ -2.25
RPS4Y1P22090 UBE2V1P10-201ENST00000414685 269 ntBASIC0.97□□□□□ -2.25
RPS4Y1P22090 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC0.97□□□□□ -2.25
RPS4Y1P22090 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC0.97□□□□□ -2.25
RPS4Y1P22090 AL117351.1-201ENST00000438864 766 ntBASIC0.97□□□□□ -2.25
RPS4Y1P22090 AC079448.1-201ENST00000449377 373 ntBASIC0.97□□□□□ -2.25
RPS4Y1P22090 AC108059.3-201ENST00000456388 214 ntBASIC0.97□□□□□ -2.25
RPS4Y1P22090 snoU13.14-201ENST00000459372 104 ntBASIC0.97□□□□□ -2.25
RPS4Y1P22090 AHI1-208ENST00000488690 712 ntTSL 5 BASIC0.97□□□□□ -2.25
RPS4Y1P22090 AC025465.3-201ENST00000510570 311 ntBASIC0.97□□□□□ -2.25
RPS4Y1P22090 AC108078.2-201ENST00000510750 236 ntBASIC0.97□□□□□ -2.25
RPS4Y1P22090 TRMT112P2-201ENST00000512910 132 ntBASIC0.97□□□□□ -2.25
RPS4Y1P22090 RNU6-965P-201ENST00000516721 96 ntBASIC0.97□□□□□ -2.25
RPS4Y1P22090 RNU6-902P-201ENST00000517212 91 ntBASIC0.97□□□□□ -2.25
RPS4Y1P22090 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC0.97□□□□□ -2.25
RPS4Y1P22090 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC0.97□□□□□ -2.25
RPS4Y1P22090 LRRC6P1-201ENST00000532188 885 ntBASIC0.97□□□□□ -2.25
RPS4Y1P22090 AC092325.1-201ENST00000566449 554 ntBASIC0.97□□□□□ -2.25
RPS4Y1P22090 MIR1273C-201ENST00000578669 77 ntBASIC0.97□□□□□ -2.25
RPS4Y1P22090 AL365204.3-201ENST00000612448 685 ntBASIC0.97□□□□□ -2.25
RPS4Y1P22090 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC0.97□□□□□ -2.25
RPS4Y1P22090 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC0.96□□□□□ -2.26
RPS4Y1P22090 Y_RNA.33-201ENST00000362591 102 ntBASIC0.96□□□□□ -2.26
RPS4Y1P22090 RNU6-462P-201ENST00000362659 105 ntBASIC0.96□□□□□ -2.26
RPS4Y1P22090 Y_RNA.110-201ENST00000363220 99 ntBASIC0.96□□□□□ -2.26
RPS4Y1P22090 RNU6-1210P-201ENST00000363775 107 ntBASIC0.96□□□□□ -2.26
RPS4Y1P22090 RNU6-271P-201ENST00000363858 105 ntBASIC0.96□□□□□ -2.26
RPS4Y1P22090 SNORA25.8-201ENST00000364831 128 ntBASIC0.96□□□□□ -2.26
RPS4Y1P22090 SMIM11P1-201ENST00000369586 178 ntBASIC0.96□□□□□ -2.26
RPS4Y1P22090 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC0.96□□□□□ -2.26
RPS4Y1P22090 NCOR1P3-201ENST00000420479 303 ntBASIC0.96□□□□□ -2.26
RPS4Y1P22090 MRPL35P3-201ENST00000421557 364 ntBASIC0.96□□□□□ -2.26
RPS4Y1P22090 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC0.96□□□□□ -2.26
RPS4Y1P22090 TOMM22P2-201ENST00000430735 237 ntBASIC0.96□□□□□ -2.26
RPS4Y1P22090 AL591212.2-201ENST00000433923 257 ntBASIC0.96□□□□□ -2.26
RPS4Y1P22090 AL135790.2-201ENST00000437701 267 ntBASIC0.96□□□□□ -2.26
RPS4Y1P22090 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC0.96□□□□□ -2.26
RPS4Y1P22090 AL035666.1-201ENST00000446195 348 ntBASIC0.96□□□□□ -2.26
RPS4Y1P22090 AC245517.4-201ENST00000448601 281 ntBASIC0.96□□□□□ -2.26
RPS4Y1P22090 AL353752.1-201ENST00000454946 260 ntBASIC0.96□□□□□ -2.26
RPS4Y1P22090 AC010409.1-201ENST00000487382 476 ntBASIC0.96□□□□□ -2.26
RPS4Y1P22090 MTCYBP40-201ENST00000509390 1135 ntBASIC0.96□□□□□ -2.26
RPS4Y1P22090 RNA5SP445-201ENST00000515889 115 ntBASIC0.96□□□□□ -2.26
RPS4Y1P22090 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.96□□□□□ -2.26
RPS4Y1P22090 SNORA31.17-201ENST00000516953 127 ntBASIC0.96□□□□□ -2.26
RPS4Y1P22090 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC0.96□□□□□ -2.26
RPS4Y1P22090 CR383656.8-201ENST00000549046 145 ntBASIC0.96□□□□□ -2.26
RPS4Y1P22090 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.96□□□□□ -2.26
RPS4Y1P22090 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC0.96□□□□□ -2.26
RPS4Y1P22090 SNORD114-21-201ENST00000606412 72 ntBASIC0.96□□□□□ -2.26
RPS4Y1P22090 AC022893.3-201ENST00000607665 437 ntBASIC0.96□□□□□ -2.26
RPS4Y1P22090 AC097468.3-201ENST00000607956 456 ntBASIC0.96□□□□□ -2.26
RPS4Y1P22090 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.95□□□□□ -2.26
RPS4Y1P22090 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
RPS4Y1P22090 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC0.95□□□□□ -2.26
RPS4Y1P22090 MIR337-201ENST00000362281 93 ntBASIC0.95□□□□□ -2.26
RPS4Y1P22090 RNY1P10-201ENST00000363268 113 ntBASIC0.95□□□□□ -2.26
RPS4Y1P22090 Y_RNA.472-201ENST00000384322 102 ntBASIC0.95□□□□□ -2.26
RPS4Y1P22090 RNU2-23P-201ENST00000410545 195 ntBASIC0.95□□□□□ -2.26
RPS4Y1P22090 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC0.95□□□□□ -2.26
RPS4Y1P22090 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC0.95□□□□□ -2.26
RPS4Y1P22090 AC092648.1-201ENST00000425870 423 ntBASIC0.95□□□□□ -2.26
RPS4Y1P22090 TIMM9P1-201ENST00000436122 256 ntBASIC0.95□□□□□ -2.26
RPS4Y1P22090 LARP1BP3-201ENST00000437229 869 ntBASIC0.95□□□□□ -2.26
RPS4Y1P22090 MTCO1P44-201ENST00000441935 243 ntBASIC0.95□□□□□ -2.26
RPS4Y1P22090 GDI2P2-201ENST00000445131 608 ntBASIC0.95□□□□□ -2.26
RPS4Y1P22090 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC0.95□□□□□ -2.26
RPS4Y1P22090 RPL30P6-201ENST00000475925 342 ntBASIC0.95□□□□□ -2.26
RPS4Y1P22090 HMGB1P30-201ENST00000492455 606 ntBASIC0.95□□□□□ -2.26
RPS4Y1P22090 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.95□□□□□ -2.26
RPS4Y1P22090 AC093259.1-201ENST00000509755 300 ntBASIC0.95□□□□□ -2.26
RPS4Y1P22090 AC109445.1-201ENST00000512356 383 ntBASIC0.95□□□□□ -2.26
RPS4Y1P22090 AC112198.4-201ENST00000515450 351 ntBASIC0.95□□□□□ -2.26
RPS4Y1P22090 RNA5SP216-201ENST00000516111 123 ntBASIC0.95□□□□□ -2.26
RPS4Y1P22090 AP000907.2-201ENST00000530827 353 ntBASIC0.95□□□□□ -2.26
RPS4Y1P22090 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC0.95□□□□□ -2.26
RPS4Y1P22090 SUB1P4-201ENST00000566062 339 ntBASIC0.95□□□□□ -2.26
RPS4Y1P22090 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC0.95□□□□□ -2.26
RPS4Y1P22090 BCRP9-201ENST00000605312 388 ntBASIC0.95□□□□□ -2.26
RPS4Y1P22090 AC103810.9-201ENST00000606688 112 ntBASIC0.95□□□□□ -2.26
RPS4Y1P22090 AL021368.1-201ENST00000607490 540 ntBASIC0.95□□□□□ -2.26
RPS4Y1P22090 AC092140.2-201ENST00000618027 521 ntBASIC0.95□□□□□ -2.26
RPS4Y1P22090 AL121895.2-201ENST00000619558 447 ntBASIC0.95□□□□□ -2.26
RPS4Y1P22090 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC0.95□□□□□ -2.26
RPS4Y1P22090 AL121890.5-201ENST00000620848 304 ntBASIC0.95□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 138.5 ms