Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 Y_RNA.597-201ENST00000410463 100 ntBASIC1.5□□□□□ -2.17
UBCP0CG48 RNU2-39P-201ENST00000410604 198 ntBASIC1.5□□□□□ -2.17
UBCP0CG48 Y_RNA.608-201ENST00000410647 95 ntBASIC1.5□□□□□ -2.17
UBCP0CG48 SSR1P2-201ENST00000415208 787 ntBASIC1.5□□□□□ -2.17
UBCP0CG48 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.5□□□□□ -2.17
UBCP0CG48 AC003989.2-201ENST00000440224 169 ntBASIC1.5□□□□□ -2.17
UBCP0CG48 AL590365.1-201ENST00000450788 243 ntBASIC1.5□□□□□ -2.17
UBCP0CG48 RPS29P11-201ENST00000496507 171 ntBASIC1.5□□□□□ -2.17
UBCP0CG48 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC1.5□□□□□ -2.17
UBCP0CG48 ANXA2P1-201ENST00000505539 926 ntBASIC1.5□□□□□ -2.17
UBCP0CG48 AC117522.1-201ENST00000509821 380 ntBASIC1.5□□□□□ -2.17
UBCP0CG48 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC1.5□□□□□ -2.17
UBCP0CG48 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.5□□□□□ -2.17
UBCP0CG48 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.5□□□□□ -2.17
UBCP0CG48 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.5□□□□□ -2.17
UBCP0CG48 AC022880.1-201ENST00000534017 973 ntBASIC1.5□□□□□ -2.17
UBCP0CG48 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.5□□□□□ -2.17
UBCP0CG48 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.5□□□□□ -2.17
UBCP0CG48 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.5□□□□□ -2.17
UBCP0CG48 AC110588.1-201ENST00000559699 137 ntBASIC1.5□□□□□ -2.17
UBCP0CG48 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC1.5□□□□□ -2.17
UBCP0CG48 AL354943.1-201ENST00000572103 781 ntBASIC1.5□□□□□ -2.17
UBCP0CG48 AC137800.2-201ENST00000574375 120 ntBASIC1.5□□□□□ -2.17
UBCP0CG48 MIR4648-201ENST00000580107 72 ntBASIC1.5□□□□□ -2.17
UBCP0CG48 AC091135.1-201ENST00000585943 307 ntBASIC1.5□□□□□ -2.17
UBCP0CG48 AC116312.1-201ENST00000606841 314 ntBASIC1.5□□□□□ -2.17
UBCP0CG48 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.5□□□□□ -2.17
UBCP0CG48 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.5□□□□□ -2.17
UBCP0CG48 AC026585.1-201ENST00000619582 524 ntBASIC1.5□□□□□ -2.17
UBCP0CG48 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.5□□□□□ -2.17
UBCP0CG48 AL157786.1-207ENST00000627771 695 ntBASIC1.5□□□□□ -2.17
UBCP0CG48 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
UBCP0CG48 ZNF680P1-201ENST00000436625 1469 ntBASIC1.5□□□□□ -2.17
UBCP0CG48 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.49□□□□□ -2.17
UBCP0CG48 RNU5F-6P-201ENST00000362979 116 ntBASIC1.49□□□□□ -2.17
UBCP0CG48 RNU6-501P-201ENST00000364072 100 ntBASIC1.49□□□□□ -2.17
UBCP0CG48 RNU6-743P-201ENST00000364151 106 ntBASIC1.49□□□□□ -2.17
UBCP0CG48 RNU6-371P-201ENST00000364283 108 ntBASIC1.49□□□□□ -2.17
UBCP0CG48 MIR558-201ENST00000384920 94 ntBASIC1.49□□□□□ -2.17
UBCP0CG48 MIR30A-201ENST00000385092 71 ntBASIC1.49□□□□□ -2.17
UBCP0CG48 EEF1A1P40-201ENST00000412883 573 ntBASIC1.49□□□□□ -2.17
UBCP0CG48 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.49□□□□□ -2.17
UBCP0CG48 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC1.49□□□□□ -2.17
UBCP0CG48 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.49□□□□□ -2.17
UBCP0CG48 MTND4P20-201ENST00000424125 869 ntBASIC1.49□□□□□ -2.17
UBCP0CG48 AL645568.3-201ENST00000433683 316 ntBASIC1.49□□□□□ -2.17
UBCP0CG48 HMGN2P23-201ENST00000456759 269 ntBASIC1.49□□□□□ -2.17
UBCP0CG48 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC1.49□□□□□ -2.17
UBCP0CG48 MTND2P33-201ENST00000506452 1031 ntBASIC1.49□□□□□ -2.17
UBCP0CG48 MTCO3P9-201ENST00000506989 781 ntBASIC1.49□□□□□ -2.17
UBCP0CG48 RNU6-311P-201ENST00000516224 102 ntBASIC1.49□□□□□ -2.17
UBCP0CG48 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC1.49□□□□□ -2.17
UBCP0CG48 AP003181.2-201ENST00000528941 181 ntBASIC1.49□□□□□ -2.17
UBCP0CG48 AP005435.4-201ENST00000529514 284 ntBASIC1.49□□□□□ -2.17
UBCP0CG48 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC1.49□□□□□ -2.17
UBCP0CG48 MIR5697-201ENST00000578045 78 ntBASIC1.49□□□□□ -2.17
UBCP0CG48 AC105129.3-201ENST00000605455 485 ntBASIC1.49□□□□□ -2.17
UBCP0CG48 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.49□□□□□ -2.17
UBCP0CG48 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.49□□□□□ -2.17
UBCP0CG48 MIR1248-201ENST00000629190 106 ntBASIC1.49□□□□□ -2.17
UBCP0CG48 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
UBCP0CG48 MIR126-201ENST00000362291 85 ntBASIC1.48□□□□□ -2.17
UBCP0CG48 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
UBCP0CG48 RNU6-925P-201ENST00000384629 104 ntBASIC1.48□□□□□ -2.17
UBCP0CG48 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
UBCP0CG48 AL079342.1-201ENST00000401460 267 ntBASIC1.48□□□□□ -2.17
UBCP0CG48 MTCYBP36-201ENST00000404146 440 ntBASIC1.48□□□□□ -2.17
UBCP0CG48 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.48□□□□□ -2.17
UBCP0CG48 AC007283.2-201ENST00000424739 197 ntBASIC1.48□□□□□ -2.17
UBCP0CG48 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC1.48□□□□□ -2.17
UBCP0CG48 AL035666.1-201ENST00000446195 348 ntBASIC1.48□□□□□ -2.17
UBCP0CG48 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.48□□□□□ -2.17
UBCP0CG48 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC1.48□□□□□ -2.17
UBCP0CG48 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.48□□□□□ -2.17
UBCP0CG48 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC1.48□□□□□ -2.17
UBCP0CG48 RNU1-86P-201ENST00000516108 154 ntBASIC1.48□□□□□ -2.17
UBCP0CG48 RNU6-970P-201ENST00000516312 107 ntBASIC1.48□□□□□ -2.17
UBCP0CG48 RNU1-107P-201ENST00000516617 154 ntBASIC1.48□□□□□ -2.17
UBCP0CG48 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.48□□□□□ -2.17
UBCP0CG48 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC1.48□□□□□ -2.17
UBCP0CG48 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.48□□□□□ -2.17
UBCP0CG48 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.48□□□□□ -2.17
UBCP0CG48 MIR5692A1-201ENST00000580523 69 ntBASIC1.48□□□□□ -2.17
UBCP0CG48 AC022022.2-201ENST00000602989 360 ntBASIC1.48□□□□□ -2.17
UBCP0CG48 AC016925.2-201ENST00000605108 242 ntBASIC1.48□□□□□ -2.17
UBCP0CG48 TUSC7.1-201ENST00000610969 165 ntBASIC1.48□□□□□ -2.17
UBCP0CG48 RMST_4.1-201ENST00000616886 107 ntBASIC1.48□□□□□ -2.17
UBCP0CG48 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC1.48□□□□□ -2.17
UBCP0CG48 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
UBCP0CG48 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC1.48□□□□□ -2.17
UBCP0CG48 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.48□□□□□ -2.17
UBCP0CG48 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.48□□□□□ -2.17
UBCP0CG48 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.47□□□□□ -2.17
UBCP0CG48 RNU6-78P-201ENST00000362897 107 ntBASIC1.47□□□□□ -2.17
UBCP0CG48 RNA5SP100-201ENST00000410903 110 ntBASIC1.47□□□□□ -2.17
UBCP0CG48 RNA5SP59-201ENST00000410922 110 ntBASIC1.47□□□□□ -2.17
UBCP0CG48 ELOCP4-201ENST00000420090 333 ntBASIC1.47□□□□□ -2.17
UBCP0CG48 AL590556.1-201ENST00000423231 483 ntBASIC1.47□□□□□ -2.17
UBCP0CG48 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC1.47□□□□□ -2.17
UBCP0CG48 AL365184.2-201ENST00000431139 435 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 235.5 ms