Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC1.2□□□□□ -2.22
COL4A2P08572 MIR892C-201ENST00000516410 77 ntBASIC1.2□□□□□ -2.22
COL4A2P08572 RNU6-678P-201ENST00000516832 109 ntBASIC1.2□□□□□ -2.22
COL4A2P08572 MIR3126-201ENST00000577443 74 ntBASIC1.2□□□□□ -2.22
COL4A2P08572 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC1.2□□□□□ -2.22
COL4A2P08572 AC105148.1-201ENST00000604961 409 ntBASIC1.2□□□□□ -2.22
COL4A2P08572 AC087045.1-201ENST00000605856 382 ntBASIC1.2□□□□□ -2.22
COL4A2P08572 AC022893.3-201ENST00000607665 437 ntBASIC1.2□□□□□ -2.22
COL4A2P08572 AC091965.4-201ENST00000607691 587 ntBASIC1.2□□□□□ -2.22
COL4A2P08572 AC096772.1-201ENST00000609146 564 ntBASIC1.2□□□□□ -2.22
COL4A2P08572 AC027807.2-201ENST00000616099 408 ntBASIC1.2□□□□□ -2.22
COL4A2P08572 AC006338.1-201ENST00000618453 749 ntBASIC1.2□□□□□ -2.22
COL4A2P08572 AC022960.3-201ENST00000619794 441 ntBASIC1.2□□□□□ -2.22
COL4A2P08572 Z99571.1-201ENST00000636677 394 ntBASIC1.2□□□□□ -2.22
COL4A2P08572 MTND5P42-201ENST00000637720 498 ntBASIC1.2□□□□□ -2.22
COL4A2P08572 AC092104.1-201ENST00000497346 1441 ntBASIC1.2□□□□□ -2.22
COL4A2P08572 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC1.2□□□□□ -2.22
COL4A2P08572 Y_RNA.18-201ENST00000362461 102 ntBASIC1.2□□□□□ -2.22
COL4A2P08572 RNU6-486P-201ENST00000363116 107 ntBASIC1.2□□□□□ -2.22
COL4A2P08572 RNU6-931P-201ENST00000363850 107 ntBASIC1.2□□□□□ -2.22
COL4A2P08572 MIR17-201ENST00000385012 84 ntBASIC1.2□□□□□ -2.22
COL4A2P08572 MIR95-201ENST00000385072 81 ntBASIC1.2□□□□□ -2.22
COL4A2P08572 FTH1P15-201ENST00000406984 280 ntBASIC1.2□□□□□ -2.22
COL4A2P08572 HMGN1P14-201ENST00000412459 517 ntBASIC1.2□□□□□ -2.22
COL4A2P08572 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.2□□□□□ -2.22
COL4A2P08572 AIMP1P2-201ENST00000425294 312 ntBASIC1.2□□□□□ -2.22
COL4A2P08572 AL353706.1-201ENST00000436728 494 ntBASIC1.2□□□□□ -2.22
COL4A2P08572 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC1.2□□□□□ -2.22
COL4A2P08572 AC023790.1-201ENST00000482174 347 ntBASIC1.2□□□□□ -2.22
COL4A2P08572 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.2□□□□□ -2.22
COL4A2P08572 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.2□□□□□ -2.22
COL4A2P08572 RN7SKP265-201ENST00000516448 223 ntBASIC1.2□□□□□ -2.22
COL4A2P08572 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC1.2□□□□□ -2.22
COL4A2P08572 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC1.2□□□□□ -2.22
COL4A2P08572 AC009902.1-201ENST00000519351 183 ntBASIC1.2□□□□□ -2.22
COL4A2P08572 AP003461.1-201ENST00000528866 78 ntBASIC1.2□□□□□ -2.22
COL4A2P08572 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC1.2□□□□□ -2.22
COL4A2P08572 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC1.2□□□□□ -2.22
COL4A2P08572 MIR3908-201ENST00000579798 126 ntBASIC1.2□□□□□ -2.22
COL4A2P08572 AC105245.1-201ENST00000581934 244 ntBASIC1.2□□□□□ -2.22
COL4A2P08572 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC1.2□□□□□ -2.22
COL4A2P08572 BCRP9-201ENST00000605312 388 ntBASIC1.2□□□□□ -2.22
COL4A2P08572 AC013244.3-201ENST00000605614 388 ntBASIC1.2□□□□□ -2.22
COL4A2P08572 AP000240.1-201ENST00000609910 452 ntBASIC1.2□□□□□ -2.22
COL4A2P08572 AC016597.2-201ENST00000613256 341 ntBASIC1.2□□□□□ -2.22
COL4A2P08572 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC1.2□□□□□ -2.22
COL4A2P08572 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
COL4A2P08572 MTND4P16-201ENST00000466108 1367 ntBASIC1.19□□□□□ -2.22
COL4A2P08572 RNU6-858P-201ENST00000362436 107 ntBASIC1.19□□□□□ -2.22
COL4A2P08572 Y_RNA.46-201ENST00000362695 102 ntBASIC1.19□□□□□ -2.22
COL4A2P08572 RNU4-28P-201ENST00000364739 141 ntBASIC1.19□□□□□ -2.22
COL4A2P08572 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.19□□□□□ -2.22
COL4A2P08572 EDDM3CP-201ENST00000415977 425 ntBASIC1.19□□□□□ -2.22
COL4A2P08572 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC1.19□□□□□ -2.22
COL4A2P08572 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC1.19□□□□□ -2.22
COL4A2P08572 RPL30P4-201ENST00000429309 333 ntBASIC1.19□□□□□ -2.22
COL4A2P08572 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC1.19□□□□□ -2.22
COL4A2P08572 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC1.19□□□□□ -2.22
COL4A2P08572 MTND2P29-201ENST00000438595 412 ntBASIC1.19□□□□□ -2.22
COL4A2P08572 AC023194.1-201ENST00000493084 308 ntBASIC1.19□□□□□ -2.22
COL4A2P08572 AKIRIN2P1-201ENST00000505898 352 ntBASIC1.19□□□□□ -2.22
COL4A2P08572 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC1.19□□□□□ -2.22
COL4A2P08572 AP005660.1-201ENST00000522972 293 ntBASIC1.19□□□□□ -2.22
COL4A2P08572 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
COL4A2P08572 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC1.19□□□□□ -2.22
COL4A2P08572 AC012435.1-202ENST00000568772 240 ntBASIC1.19□□□□□ -2.22
COL4A2P08572 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.19□□□□□ -2.22
COL4A2P08572 FAM106DP-201ENST00000586416 501 ntBASIC1.19□□□□□ -2.22
COL4A2P08572 AC025165.5-201ENST00000602802 578 ntBASIC1.19□□□□□ -2.22
COL4A2P08572 AL031281.1-201ENST00000604049 488 ntBASIC1.19□□□□□ -2.22
COL4A2P08572 MIR15A-201ENST00000607334 83 ntBASIC1.19□□□□□ -2.22
COL4A2P08572 RNU6-87P-201ENST00000607561 108 ntBASIC1.19□□□□□ -2.22
COL4A2P08572 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC1.19□□□□□ -2.22
COL4A2P08572 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
COL4A2P08572 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.18□□□□□ -2.22
COL4A2P08572 AL391994.1-201ENST00000254724 282 ntBASIC1.18□□□□□ -2.22
COL4A2P08572 RNU5E-1-201ENST00000362477 120 ntBASIC1.18□□□□□ -2.22
COL4A2P08572 MRPL42P2-201ENST00000403169 426 ntBASIC1.18□□□□□ -2.22
COL4A2P08572 MIR1285-1-201ENST00000408593 84 ntBASIC1.18□□□□□ -2.22
COL4A2P08572 RNU6-1025P-201ENST00000410629 104 ntBASIC1.18□□□□□ -2.22
COL4A2P08572 RNU2-63P-201ENST00000410792 194 ntBASIC1.18□□□□□ -2.22
COL4A2P08572 AL022400.1-201ENST00000423946 935 ntBASIC1.18□□□□□ -2.22
COL4A2P08572 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC1.18□□□□□ -2.22
COL4A2P08572 TRIM60P10Y-201ENST00000425589 751 ntBASIC1.18□□□□□ -2.22
COL4A2P08572 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC1.18□□□□□ -2.22
COL4A2P08572 AC092001.1-201ENST00000453012 261 ntBASIC1.18□□□□□ -2.22
COL4A2P08572 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC1.18□□□□□ -2.22
COL4A2P08572 DYNLL1P5-201ENST00000467158 270 ntBASIC1.18□□□□□ -2.22
COL4A2P08572 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.18□□□□□ -2.22
COL4A2P08572 RNU6-1092P-201ENST00000516955 87 ntBASIC1.18□□□□□ -2.22
COL4A2P08572 ACA59.2-201ENST00000517061 156 ntBASIC1.18□□□□□ -2.22
COL4A2P08572 SNORA31.25-201ENST00000517242 134 ntBASIC1.18□□□□□ -2.22
COL4A2P08572 MTATP6P15-201ENST00000527233 835 ntBASIC1.18□□□□□ -2.22
COL4A2P08572 AC011979.2-201ENST00000527568 352 ntBASIC1.18□□□□□ -2.22
COL4A2P08572 AC007229.1-201ENST00000590455 412 ntBASIC1.18□□□□□ -2.22
COL4A2P08572 AL138963.2-201ENST00000605137 226 ntBASIC1.18□□□□□ -2.22
COL4A2P08572 AC105129.3-201ENST00000605455 485 ntBASIC1.18□□□□□ -2.22
COL4A2P08572 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC1.18□□□□□ -2.22
COL4A2P08572 AL359547.2-201ENST00000615810 418 ntBASIC1.18□□□□□ -2.22
COL4A2P08572 MIR6134-201ENST00000617606 109 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 123.1 ms