Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC3.01□□□□□ -1.93
MMP3P08254 Y_RNA.675-201ENST00000516389 149 ntBASIC3.01□□□□□ -1.93
MMP3P08254 SNORD59.2-201ENST00000516873 68 ntBASIC3.01□□□□□ -1.93
MMP3P08254 COPS8P3-201ENST00000526024 482 ntBASIC3.01□□□□□ -1.93
MMP3P08254 AP000867.2-201ENST00000532468 320 ntBASIC3.01□□□□□ -1.93
MMP3P08254 AMZ2P1-203ENST00000565833 850 ntBASIC3.01□□□□□ -1.93
MMP3P08254 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.01□□□□□ -1.93
MMP3P08254 MIR4795-201ENST00000584182 89 ntBASIC3.01□□□□□ -1.93
MMP3P08254 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC3.01□□□□□ -1.93
MMP3P08254 APOOP1-201ENST00000604695 592 ntBASIC3.01□□□□□ -1.93
MMP3P08254 AC104237.2-201ENST00000612456 443 ntBASIC3.01□□□□□ -1.93
MMP3P08254 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.01□□□□□ -1.93
MMP3P08254 MIR1302-1-201ENST00000637932 143 ntBASIC3.01□□□□□ -1.93
MMP3P08254 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
MMP3P08254 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.01□□□□□ -1.93
MMP3P08254 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
MMP3P08254 AC073544.1-201ENST00000600110 1595 ntBASIC3□□□□□ -1.93
MMP3P08254 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3□□□□□ -1.93
MMP3P08254 Y_RNA.212-201ENST00000364177 102 ntBASIC3□□□□□ -1.93
MMP3P08254 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3□□□□□ -1.93
MMP3P08254 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3□□□□□ -1.93
MMP3P08254 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3□□□□□ -1.93
MMP3P08254 RPL21P3-201ENST00000395517 478 ntBASIC3□□□□□ -1.93
MMP3P08254 AL356057.2-201ENST00000403318 432 ntBASIC3□□□□□ -1.93
MMP3P08254 RNA5SP38-201ENST00000410750 119 ntBASIC3□□□□□ -1.93
MMP3P08254 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3□□□□□ -1.93
MMP3P08254 RPL7P37-201ENST00000425095 738 ntBASIC3□□□□□ -1.93
MMP3P08254 AC098614.2-201ENST00000426040 255 ntBASIC3□□□□□ -1.93
MMP3P08254 AL078601.1-201ENST00000444542 271 ntBASIC3□□□□□ -1.93
MMP3P08254 AMD1P1-201ENST00000457220 922 ntBASIC3□□□□□ -1.93
MMP3P08254 AC146507.2-201ENST00000460608 476 ntBASIC3□□□□□ -1.93
MMP3P08254 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC3□□□□□ -1.93
MMP3P08254 RNA5SP148-201ENST00000516527 94 ntBASIC3□□□□□ -1.93
MMP3P08254 AC068657.1-201ENST00000520807 306 ntBASIC3□□□□□ -1.93
MMP3P08254 AC104576.1-201ENST00000524225 88 ntBASIC3□□□□□ -1.93
MMP3P08254 AP005597.4-201ENST00000526762 229 ntBASIC3□□□□□ -1.93
MMP3P08254 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3□□□□□ -1.93
MMP3P08254 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC3□□□□□ -1.93
MMP3P08254 MIR3609-201ENST00000582661 80 ntBASIC3□□□□□ -1.93
MMP3P08254 AL645944.1-201ENST00000603857 493 ntBASIC3□□□□□ -1.93
MMP3P08254 RMST_4.1-201ENST00000616886 107 ntBASIC3□□□□□ -1.93
MMP3P08254 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3□□□□□ -1.93
MMP3P08254 U2.21-201ENST00000637295 81 ntBASIC3□□□□□ -1.93
MMP3P08254 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3□□□□□ -1.93
MMP3P08254 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3□□□□□ -1.93
MMP3P08254 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3□□□□□ -1.93
MMP3P08254 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3□□□□□ -1.93
MMP3P08254 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.99□□□□□ -1.93
MMP3P08254 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
MMP3P08254 MIR148B-201ENST00000362252 99 ntBASIC2.99□□□□□ -1.93
MMP3P08254 RNU6-37P-201ENST00000362692 107 ntBASIC2.99□□□□□ -1.93
MMP3P08254 RNU6-778P-201ENST00000363269 103 ntBASIC2.99□□□□□ -1.93
MMP3P08254 RNU6-11P-201ENST00000364234 107 ntBASIC2.99□□□□□ -1.93
MMP3P08254 Z98749.2-208ENST00000381646 500 ntBASIC2.99□□□□□ -1.93
MMP3P08254 RNU6-25P-201ENST00000383873 107 ntBASIC2.99□□□□□ -1.93
MMP3P08254 RNU6-1-201ENST00000383898 107 ntBASIC2.99□□□□□ -1.93
MMP3P08254 RNU6-48P-201ENST00000384161 107 ntBASIC2.99□□□□□ -1.93
MMP3P08254 RNU6-36P-201ENST00000384172 107 ntBASIC2.99□□□□□ -1.93
MMP3P08254 RNU6-1013P-201ENST00000384180 107 ntBASIC2.99□□□□□ -1.93
MMP3P08254 RNU6-4P-201ENST00000384205 107 ntBASIC2.99□□□□□ -1.93
MMP3P08254 RNU6-5P-201ENST00000384238 107 ntBASIC2.99□□□□□ -1.93
MMP3P08254 RNU6-3P-201ENST00000384314 107 ntBASIC2.99□□□□□ -1.93
MMP3P08254 RNU6-16P-201ENST00000384385 107 ntBASIC2.99□□□□□ -1.93
MMP3P08254 RNU6-15P-201ENST00000384534 107 ntBASIC2.99□□□□□ -1.93
MMP3P08254 RNU6-2-201ENST00000384627 107 ntBASIC2.99□□□□□ -1.93
MMP3P08254 RNU6-29P-201ENST00000384637 107 ntBASIC2.99□□□□□ -1.93
MMP3P08254 SNORA1.3-201ENST00000384676 136 ntBASIC2.99□□□□□ -1.93
MMP3P08254 RNU6-9-201ENST00000384776 107 ntBASIC2.99□□□□□ -1.93
MMP3P08254 RNU6-33P-201ENST00000384793 107 ntBASIC2.99□□□□□ -1.93
MMP3P08254 MIR181A2-201ENST00000384863 110 ntBASIC2.99□□□□□ -1.93
MMP3P08254 RNU6-1304P-201ENST00000411374 106 ntBASIC2.99□□□□□ -1.93
MMP3P08254 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.99□□□□□ -1.93
MMP3P08254 AC016831.2-201ENST00000417179 352 ntBASIC2.99□□□□□ -1.93
MMP3P08254 HMGN2P30-201ENST00000423237 256 ntBASIC2.99□□□□□ -1.93
MMP3P08254 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.99□□□□□ -1.93
MMP3P08254 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC2.99□□□□□ -1.93
MMP3P08254 AL513124.1-201ENST00000450410 614 ntBASIC2.99□□□□□ -1.93
MMP3P08254 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.99□□□□□ -1.93
MMP3P08254 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.99□□□□□ -1.93
MMP3P08254 YWHAEP4-201ENST00000505390 198 ntBASIC2.99□□□□□ -1.93
MMP3P08254 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.99□□□□□ -1.93
MMP3P08254 RNU6-277P-201ENST00000516272 106 ntBASIC2.99□□□□□ -1.93
MMP3P08254 RN7SKP282-201ENST00000516824 299 ntBASIC2.99□□□□□ -1.93
MMP3P08254 RNU6-1183P-201ENST00000517054 60 ntBASIC2.99□□□□□ -1.93
MMP3P08254 RNA5SP380-201ENST00000517190 98 ntBASIC2.99□□□□□ -1.93
MMP3P08254 RNU6-711P-201ENST00000517255 106 ntBASIC2.99□□□□□ -1.93
MMP3P08254 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.99□□□□□ -1.93
MMP3P08254 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC2.99□□□□□ -1.93
MMP3P08254 AP005639.2-201ENST00000527592 928 ntBASIC2.99□□□□□ -1.93
MMP3P08254 CYCSP27-201ENST00000527643 293 ntBASIC2.99□□□□□ -1.93
MMP3P08254 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.99□□□□□ -1.93
MMP3P08254 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC2.99□□□□□ -1.93
MMP3P08254 AL355375.2-201ENST00000574825 175 ntBASIC2.99□□□□□ -1.93
MMP3P08254 MIR4790-201ENST00000577799 79 ntBASIC2.99□□□□□ -1.93
MMP3P08254 AC087045.1-201ENST00000605856 382 ntBASIC2.99□□□□□ -1.93
MMP3P08254 RNU6-6P-201ENST00000606623 107 ntBASIC2.99□□□□□ -1.93
MMP3P08254 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
MMP3P08254 AL138726.1-201ENST00000614873 333 ntBASIC2.99□□□□□ -1.93
MMP3P08254 MIR6076-201ENST00000617521 113 ntBASIC2.99□□□□□ -1.93
MMP3P08254 AC138627.2-201ENST00000624202 601 ntBASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms