Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.67□□□□□ -2.14
HLA-DPB1P04440 U4atac.1-201ENST00000618345 95 ntBASIC1.67□□□□□ -2.14
HLA-DPB1P04440 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.67□□□□□ -2.14
HLA-DPB1P04440 MIR5739-201ENST00000619803 80 ntBASIC1.67□□□□□ -2.14
HLA-DPB1P04440 AC138649.3-201ENST00000622154 254 ntBASIC1.67□□□□□ -2.14
HLA-DPB1P04440 AC011155.2-201ENST00000623202 216 ntBASIC1.67□□□□□ -2.14
HLA-DPB1P04440 FARSBP1-201ENST00000435808 1778 ntBASIC1.67□□□□□ -2.14
HLA-DPB1P04440 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.67□□□□□ -2.14
HLA-DPB1P04440 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.67□□□□□ -2.14
HLA-DPB1P04440 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
HLA-DPB1P04440 Y_RNA.40-201ENST00000362645 93 ntBASIC1.66□□□□□ -2.14
HLA-DPB1P04440 RNU6-529P-201ENST00000363383 104 ntBASIC1.66□□□□□ -2.14
HLA-DPB1P04440 RNU6-622P-201ENST00000384272 103 ntBASIC1.66□□□□□ -2.14
HLA-DPB1P04440 MIR186-201ENST00000384988 86 ntBASIC1.66□□□□□ -2.14
HLA-DPB1P04440 MIR95-201ENST00000385072 81 ntBASIC1.66□□□□□ -2.14
HLA-DPB1P04440 RNU6-550P-201ENST00000391057 101 ntBASIC1.66□□□□□ -2.14
HLA-DPB1P04440 AL079342.1-201ENST00000401460 267 ntBASIC1.66□□□□□ -2.14
HLA-DPB1P04440 SNORD23.1-201ENST00000408212 104 ntBASIC1.66□□□□□ -2.14
HLA-DPB1P04440 RNU2-63P-201ENST00000410792 194 ntBASIC1.66□□□□□ -2.14
HLA-DPB1P04440 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC1.66□□□□□ -2.14
HLA-DPB1P04440 BX295541.1-201ENST00000417774 250 ntBASIC1.66□□□□□ -2.14
HLA-DPB1P04440 AC138623.1-201ENST00000418060 216 ntBASIC1.66□□□□□ -2.14
HLA-DPB1P04440 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC1.66□□□□□ -2.14
HLA-DPB1P04440 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.66□□□□□ -2.14
HLA-DPB1P04440 AL161788.1-201ENST00000441805 169 ntBASIC1.66□□□□□ -2.14
HLA-DPB1P04440 AC124916.1-201ENST00000444020 547 ntBASIC1.66□□□□□ -2.14
HLA-DPB1P04440 RNA5SP269-201ENST00000459032 137 ntBASIC1.66□□□□□ -2.14
HLA-DPB1P04440 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC1.66□□□□□ -2.14
HLA-DPB1P04440 AC018868.1-201ENST00000491307 315 ntBASIC1.66□□□□□ -2.14
HLA-DPB1P04440 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC1.66□□□□□ -2.14
HLA-DPB1P04440 SNORA43.2-201ENST00000516652 128 ntBASIC1.66□□□□□ -2.14
HLA-DPB1P04440 RNU6-410P-201ENST00000517006 107 ntBASIC1.66□□□□□ -2.14
HLA-DPB1P04440 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.66□□□□□ -2.14
HLA-DPB1P04440 CYCSP26-201ENST00000534107 320 ntBASIC1.66□□□□□ -2.14
HLA-DPB1P04440 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.66□□□□□ -2.14
HLA-DPB1P04440 AC007375.1-201ENST00000554513 578 ntBASIC1.66□□□□□ -2.14
HLA-DPB1P04440 AC233702.2-202ENST00000562547 291 ntBASIC1.66□□□□□ -2.14
HLA-DPB1P04440 AL138976.2-201ENST00000563989 694 ntBASIC1.66□□□□□ -2.14
HLA-DPB1P04440 AL158211.1-201ENST00000566763 763 ntBASIC1.66□□□□□ -2.14
HLA-DPB1P04440 AC093249.1-201ENST00000567049 203 ntBASIC1.66□□□□□ -2.14
HLA-DPB1P04440 MIR3913-1-201ENST00000577744 102 ntBASIC1.66□□□□□ -2.14
HLA-DPB1P04440 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC1.66□□□□□ -2.14
HLA-DPB1P04440 NIFKP6-201ENST00000598115 845 ntBASIC1.66□□□□□ -2.14
HLA-DPB1P04440 RPL30P11-203ENST00000598995 310 ntBASIC1.66□□□□□ -2.14
HLA-DPB1P04440 AC073410.2-201ENST00000603240 332 ntBASIC1.66□□□□□ -2.14
HLA-DPB1P04440 AC009090.3-201ENST00000616553 565 ntBASIC1.66□□□□□ -2.14
HLA-DPB1P04440 AL031601.2-202ENST00000622650 282 ntBASIC1.66□□□□□ -2.14
HLA-DPB1P04440 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.66□□□□□ -2.14
HLA-DPB1P04440 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.66□□□□□ -2.14
HLA-DPB1P04440 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.65□□□□□ -2.14
HLA-DPB1P04440 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.65□□□□□ -2.14
HLA-DPB1P04440 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.65□□□□□ -2.14
HLA-DPB1P04440 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
HLA-DPB1P04440 RNU6-1010P-201ENST00000362757 107 ntBASIC1.65□□□□□ -2.15
HLA-DPB1P04440 SNORD114-19-201ENST00000363072 75 ntBASIC1.65□□□□□ -2.15
HLA-DPB1P04440 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
HLA-DPB1P04440 RNU2-3P-201ENST00000410144 191 ntBASIC1.65□□□□□ -2.15
HLA-DPB1P04440 RN7SKP158-201ENST00000410453 326 ntBASIC1.65□□□□□ -2.15
HLA-DPB1P04440 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.65□□□□□ -2.15
HLA-DPB1P04440 OR6C66P-201ENST00000414917 930 ntBASIC1.65□□□□□ -2.15
HLA-DPB1P04440 C1DP2-201ENST00000418167 426 ntBASIC1.65□□□□□ -2.15
HLA-DPB1P04440 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC1.65□□□□□ -2.15
HLA-DPB1P04440 GPR143P-201ENST00000434155 205 ntBASIC1.65□□□□□ -2.15
HLA-DPB1P04440 MTND1P26-201ENST00000440488 538 ntBASIC1.65□□□□□ -2.15
HLA-DPB1P04440 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.65□□□□□ -2.15
HLA-DPB1P04440 AC079448.1-201ENST00000449377 373 ntBASIC1.65□□□□□ -2.15
HLA-DPB1P04440 MTCO3P9-201ENST00000506989 781 ntBASIC1.65□□□□□ -2.15
HLA-DPB1P04440 HSPE1P18-201ENST00000517602 280 ntBASIC1.65□□□□□ -2.15
HLA-DPB1P04440 AP003072.2-201ENST00000527756 676 ntBASIC1.65□□□□□ -2.15
HLA-DPB1P04440 CR383656.8-201ENST00000549046 145 ntBASIC1.65□□□□□ -2.15
HLA-DPB1P04440 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.65□□□□□ -2.15
HLA-DPB1P04440 PSMA3P-201ENST00000555485 635 ntBASIC1.65□□□□□ -2.15
HLA-DPB1P04440 MTND3P12-201ENST00000559068 328 ntBASIC1.65□□□□□ -2.15
HLA-DPB1P04440 MIR4775-201ENST00000581168 75 ntBASIC1.65□□□□□ -2.15
HLA-DPB1P04440 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC1.65□□□□□ -2.15
HLA-DPB1P04440 AC087241.4-201ENST00000612441 480 ntBASIC1.65□□□□□ -2.15
HLA-DPB1P04440 MIR3529-201ENST00000637713 78 ntBASIC1.65□□□□□ -2.15
HLA-DPB1P04440 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
HLA-DPB1P04440 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
HLA-DPB1P04440 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
HLA-DPB1P04440 Y_RNA.201-201ENST00000364052 96 ntBASIC1.64□□□□□ -2.15
HLA-DPB1P04440 RNU6-1303P-201ENST00000364841 107 ntBASIC1.64□□□□□ -2.15
HLA-DPB1P04440 SNORA6-201ENST00000384033 151 ntBASIC1.64□□□□□ -2.15
HLA-DPB1P04440 RNU1-57P-201ENST00000384491 166 ntBASIC1.64□□□□□ -2.15
HLA-DPB1P04440 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
HLA-DPB1P04440 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
HLA-DPB1P04440 CYCSP33-201ENST00000414485 327 ntBASIC1.64□□□□□ -2.15
HLA-DPB1P04440 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.64□□□□□ -2.15
HLA-DPB1P04440 OOSP1P1-201ENST00000423265 274 ntBASIC1.64□□□□□ -2.15
HLA-DPB1P04440 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.64□□□□□ -2.15
HLA-DPB1P04440 HMGB1P31-201ENST00000437242 427 ntBASIC1.64□□□□□ -2.15
HLA-DPB1P04440 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.64□□□□□ -2.15
HLA-DPB1P04440 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.64□□□□□ -2.15
HLA-DPB1P04440 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.64□□□□□ -2.15
HLA-DPB1P04440 RPS29P15-201ENST00000458329 171 ntBASIC1.64□□□□□ -2.15
HLA-DPB1P04440 AC117503.1-201ENST00000472241 394 ntBASIC1.64□□□□□ -2.15
HLA-DPB1P04440 RN7SL429P-201ENST00000479090 223 ntBASIC1.64□□□□□ -2.15
HLA-DPB1P04440 RN7SL489P-201ENST00000486185 223 ntBASIC1.64□□□□□ -2.15
HLA-DPB1P04440 RPS27P21-201ENST00000486977 252 ntBASIC1.64□□□□□ -2.15
HLA-DPB1P04440 RN7SL327P-201ENST00000488659 223 ntBASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 128.8 ms