Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC2.84□□□□□ -1.95
LDLRP01130 AL157871.3-201ENST00000557231 293 ntBASIC2.84□□□□□ -1.95
LDLRP01130 FRG2DP-202ENST00000566967 323 ntBASIC2.84□□□□□ -1.95
LDLRP01130 AC005668.1-201ENST00000571142 476 ntBASIC2.84□□□□□ -1.95
LDLRP01130 MIR1273C-201ENST00000578669 77 ntBASIC2.84□□□□□ -1.95
LDLRP01130 MIR3671-201ENST00000580455 88 ntBASIC2.84□□□□□ -1.95
LDLRP01130 UBL5P2-201ENST00000583788 219 ntBASIC2.84□□□□□ -1.95
LDLRP01130 ELOCP29-201ENST00000588193 334 ntBASIC2.84□□□□□ -1.95
LDLRP01130 AC023043.3-201ENST00000593113 385 ntBASIC2.84□□□□□ -1.95
LDLRP01130 AC020895.1-201ENST00000595362 272 ntBASIC2.84□□□□□ -1.95
LDLRP01130 CTHRC1P1-201ENST00000605383 469 ntBASIC2.84□□□□□ -1.95
LDLRP01130 AL627309.6-201ENST00000606857 840 ntBASIC2.84□□□□□ -1.95
LDLRP01130 DUSP12P1-201ENST00000612874 516 ntBASIC2.84□□□□□ -1.95
LDLRP01130 AC107871.2-201ENST00000612894 502 ntBASIC2.84□□□□□ -1.95
LDLRP01130 AC093913.1-201ENST00000614178 329 ntBASIC2.84□□□□□ -1.95
LDLRP01130 uc_338.11-201ENST00000619132 160 ntBASIC2.84□□□□□ -1.95
LDLRP01130 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.84□□□□□ -1.95
LDLRP01130 IGHVIII-44-202ENST00000636235 289 ntBASIC2.84□□□□□ -1.95
LDLRP01130 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.84□□□□□ -1.95
LDLRP01130 AL359693.1-201ENST00000614959 2407 ntBASIC2.84□□□□□ -1.95
LDLRP01130 AC000403.1-201ENST00000613696 3585 ntBASIC2.84□□□□□ -1.95
LDLRP01130 AC022336.2-201ENST00000568966 2538 ntBASIC2.84□□□□□ -1.96
LDLRP01130 MTND4P14-201ENST00000435799 1354 ntBASIC2.84□□□□□ -1.96
LDLRP01130 MTND4P27-201ENST00000450813 1354 ntBASIC2.84□□□□□ -1.96
LDLRP01130 AC138915.1-201ENST00000565427 1685 ntBASIC2.83□□□□□ -1.96
LDLRP01130 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.83□□□□□ -1.96
LDLRP01130 RNU4-82P-201ENST00000362443 140 ntBASIC2.83□□□□□ -1.96
LDLRP01130 Y_RNA.33-201ENST00000362591 102 ntBASIC2.83□□□□□ -1.96
LDLRP01130 Y_RNA.128-201ENST00000363391 112 ntBASIC2.83□□□□□ -1.96
LDLRP01130 Y_RNA.146-201ENST00000363549 102 ntBASIC2.83□□□□□ -1.96
LDLRP01130 SNORA71.1-201ENST00000364523 117 ntBASIC2.83□□□□□ -1.96
LDLRP01130 Y_RNA.315-201ENST00000365117 102 ntBASIC2.83□□□□□ -1.96
LDLRP01130 MIR559-201ENST00000385188 96 ntBASIC2.83□□□□□ -1.96
LDLRP01130 RNU4-46P-201ENST00000410818 138 ntBASIC2.83□□□□□ -1.96
LDLRP01130 RPL21P90-201ENST00000415692 466 ntBASIC2.83□□□□□ -1.96
LDLRP01130 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.83□□□□□ -1.96
LDLRP01130 Z82205.1-201ENST00000428456 297 ntBASIC2.83□□□□□ -1.96
LDLRP01130 AC236972.2-201ENST00000434979 310 ntBASIC2.83□□□□□ -1.96
LDLRP01130 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.83□□□□□ -1.96
LDLRP01130 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.83□□□□□ -1.96
LDLRP01130 GSTA11P-201ENST00000452866 669 ntBASIC2.83□□□□□ -1.96
LDLRP01130 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.83□□□□□ -1.96
LDLRP01130 SNRPFP3-201ENST00000457792 225 ntBASIC2.83□□□□□ -1.96
LDLRP01130 RNU7-180P-201ENST00000459240 63 ntBASIC2.83□□□□□ -1.96
LDLRP01130 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.83□□□□□ -1.96
LDLRP01130 RAC1P5-201ENST00000512182 576 ntBASIC2.83□□□□□ -1.96
LDLRP01130 Y_RNA.718-201ENST00000517110 102 ntBASIC2.83□□□□□ -1.96
LDLRP01130 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.83□□□□□ -1.96
LDLRP01130 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC2.83□□□□□ -1.96
LDLRP01130 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.83□□□□□ -1.96
LDLRP01130 AC007536.1-201ENST00000533382 349 ntBASIC2.83□□□□□ -1.96
LDLRP01130 MIR5583-1-201ENST00000580941 59 ntBASIC2.83□□□□□ -1.96
LDLRP01130 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.83□□□□□ -1.96
LDLRP01130 MIR4435-1-201ENST00000582552 80 ntBASIC2.83□□□□□ -1.96
LDLRP01130 AL133215.3-201ENST00000609801 448 ntBASIC2.83□□□□□ -1.96
LDLRP01130 AC040896.1-201ENST00000613819 479 ntBASIC2.83□□□□□ -1.96
LDLRP01130 AL161629.2-201ENST00000615347 275 ntBASIC2.83□□□□□ -1.96
LDLRP01130 AC090971.5-201ENST00000621102 293 ntBASIC2.83□□□□□ -1.96
LDLRP01130 AC002064.3-201ENST00000623448 346 ntBASIC2.83□□□□□ -1.96
LDLRP01130 MIR6733-201ENST00000635723 61 ntBASIC2.83□□□□□ -1.96
LDLRP01130 MTND4LP32-201ENST00000636111 270 ntBASIC2.83□□□□□ -1.96
LDLRP01130 U6.99-201ENST00000637524 83 ntBASIC2.83□□□□□ -1.96
LDLRP01130 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.83□□□□□ -1.96
LDLRP01130 AL355596.1-201ENST00000565399 3996 ntBASIC2.83□□□□□ -1.96
LDLRP01130 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.83□□□□□ -1.96
LDLRP01130 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.82□□□□□ -1.96
LDLRP01130 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.82□□□□□ -1.96
LDLRP01130 RPL9P7-201ENST00000330965 580 ntBASIC2.82□□□□□ -1.96
LDLRP01130 Y_RNA.100-201ENST00000363141 102 ntBASIC2.82□□□□□ -1.96
LDLRP01130 SNORD56.5-201ENST00000364281 72 ntBASIC2.82□□□□□ -1.96
LDLRP01130 RNU4-66P-201ENST00000365199 138 ntBASIC2.82□□□□□ -1.96
LDLRP01130 Y_RNA.373-201ENST00000365600 103 ntBASIC2.82□□□□□ -1.96
LDLRP01130 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.82□□□□□ -1.96
LDLRP01130 RNU6-1160P-201ENST00000384546 104 ntBASIC2.82□□□□□ -1.96
LDLRP01130 RNU6-658P-201ENST00000384606 106 ntBASIC2.82□□□□□ -1.96
LDLRP01130 MIR578-201ENST00000384828 96 ntBASIC2.82□□□□□ -1.96
LDLRP01130 AL590004.2-201ENST00000404787 371 ntBASIC2.82□□□□□ -1.96
LDLRP01130 AL606923.1-201ENST00000406616 190 ntBASIC2.82□□□□□ -1.96
LDLRP01130 RNU4-26P-201ENST00000410270 107 ntBASIC2.82□□□□□ -1.96
LDLRP01130 EEF1A1P41-201ENST00000414667 207 ntBASIC2.82□□□□□ -1.96
LDLRP01130 AC007560.1-201ENST00000426912 237 ntBASIC2.82□□□□□ -1.96
LDLRP01130 AL121890.1-201ENST00000435457 205 ntBASIC2.82□□□□□ -1.96
LDLRP01130 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.82□□□□□ -1.96
LDLRP01130 RPS29P6-201ENST00000438196 145 ntBASIC2.82□□□□□ -1.96
LDLRP01130 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.82□□□□□ -1.96
LDLRP01130 RPL21P2-201ENST00000440049 481 ntBASIC2.82□□□□□ -1.96
LDLRP01130 PRPS1P1-201ENST00000445305 876 ntBASIC2.82□□□□□ -1.96
LDLRP01130 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC2.82□□□□□ -1.96
LDLRP01130 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC2.82□□□□□ -1.96
LDLRP01130 RPL26P9-201ENST00000457466 433 ntBASIC2.82□□□□□ -1.96
LDLRP01130 TRBV1-201ENST00000476502 284 ntBASIC2.82□□□□□ -1.96
LDLRP01130 AC027575.1-201ENST00000481064 460 ntBASIC2.82□□□□□ -1.96
LDLRP01130 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.82□□□□□ -1.96
LDLRP01130 CCDC34P1-201ENST00000507441 517 ntBASIC2.82□□□□□ -1.96
LDLRP01130 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2.82□□□□□ -1.96
LDLRP01130 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.82□□□□□ -1.96
LDLRP01130 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.82□□□□□ -1.96
LDLRP01130 RNU6-1088P-201ENST00000516850 104 ntBASIC2.82□□□□□ -1.96
LDLRP01130 Y_RNA.711-201ENST00000516993 102 ntBASIC2.82□□□□□ -1.96
LDLRP01130 SNORA25.17-201ENST00000517184 124 ntBASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 129.9 ms