Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
CTDNEP1O95476 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC1.82□□□□□ -2.12
CTDNEP1O95476 Y_RNA.51-201ENST00000362725 102 ntBASIC1.82□□□□□ -2.12
CTDNEP1O95476 Y_RNA.367-201ENST00000365544 101 ntBASIC1.82□□□□□ -2.12
CTDNEP1O95476 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.82□□□□□ -2.12
CTDNEP1O95476 RNU6-658P-201ENST00000384606 106 ntBASIC1.82□□□□□ -2.12
CTDNEP1O95476 MIR1-2-201ENST00000384961 85 ntBASIC1.82□□□□□ -2.12
CTDNEP1O95476 MIR218-1-201ENST00000384999 110 ntBASIC1.82□□□□□ -2.12
CTDNEP1O95476 RNU2-8P-201ENST00000410727 190 ntBASIC1.82□□□□□ -2.12
CTDNEP1O95476 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC1.82□□□□□ -2.12
CTDNEP1O95476 NDUFS5P4-201ENST00000412983 318 ntBASIC1.82□□□□□ -2.12
CTDNEP1O95476 AL358934.1-201ENST00000432346 324 ntBASIC1.82□□□□□ -2.12
CTDNEP1O95476 AL121890.1-201ENST00000435457 205 ntBASIC1.82□□□□□ -2.12
CTDNEP1O95476 MTND4P32-201ENST00000437189 1237 ntBASIC1.82□□□□□ -2.12
CTDNEP1O95476 AC016691.1-201ENST00000441321 413 ntBASIC1.82□□□□□ -2.12
CTDNEP1O95476 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC1.82□□□□□ -2.12
CTDNEP1O95476 KATNBL1P3-201ENST00000443475 909 ntBASIC1.82□□□□□ -2.12
CTDNEP1O95476 AC124916.1-201ENST00000444020 547 ntBASIC1.82□□□□□ -2.12
CTDNEP1O95476 RPL31P3-201ENST00000458430 332 ntBASIC1.82□□□□□ -2.12
CTDNEP1O95476 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC1.82□□□□□ -2.12
CTDNEP1O95476 AC055731.1-201ENST00000474387 401 ntBASIC1.82□□□□□ -2.12
CTDNEP1O95476 YWHAEP4-201ENST00000505390 198 ntBASIC1.82□□□□□ -2.12
CTDNEP1O95476 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.82□□□□□ -2.12
CTDNEP1O95476 SNORA31.6-201ENST00000516241 130 ntBASIC1.82□□□□□ -2.12
CTDNEP1O95476 MIR892C-201ENST00000516410 77 ntBASIC1.82□□□□□ -2.12
CTDNEP1O95476 RNU6-1183P-201ENST00000517054 60 ntBASIC1.82□□□□□ -2.12
CTDNEP1O95476 RNU6-430P-201ENST00000517078 107 ntBASIC1.82□□□□□ -2.12
CTDNEP1O95476 RNU6-1315P-201ENST00000517187 99 ntBASIC1.82□□□□□ -2.12
CTDNEP1O95476 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.82□□□□□ -2.12
CTDNEP1O95476 AP003072.2-201ENST00000527756 676 ntBASIC1.82□□□□□ -2.12
CTDNEP1O95476 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.82□□□□□ -2.12
CTDNEP1O95476 NACAP3-201ENST00000552100 481 ntBASIC1.82□□□□□ -2.12
CTDNEP1O95476 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC1.82□□□□□ -2.12
CTDNEP1O95476 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.82□□□□□ -2.12
CTDNEP1O95476 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC1.82□□□□□ -2.12
CTDNEP1O95476 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.82□□□□□ -2.12
CTDNEP1O95476 AC008521.1-201ENST00000587471 187 ntBASIC1.82□□□□□ -2.12
CTDNEP1O95476 AC078899.2-201ENST00000595282 212 ntBASIC1.82□□□□□ -2.12
CTDNEP1O95476 AL158827.2-201ENST00000602494 330 ntBASIC1.82□□□□□ -2.12
CTDNEP1O95476 AL391813.1-201ENST00000603098 260 ntBASIC1.82□□□□□ -2.12
CTDNEP1O95476 AC174048.1-201ENST00000603389 144 ntBASIC1.82□□□□□ -2.12
CTDNEP1O95476 MIR502-201ENST00000606349 86 ntBASIC1.82□□□□□ -2.12
CTDNEP1O95476 MIR98-201ENST00000606724 119 ntBASIC1.82□□□□□ -2.12
CTDNEP1O95476 AC012409.4-201ENST00000612923 249 ntBASIC1.82□□□□□ -2.12
CTDNEP1O95476 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
CTDNEP1O95476 AL691447.3-201ENST00000635020 330 ntBASIC1.82□□□□□ -2.12
CTDNEP1O95476 MTND5P30-201ENST00000452896 1731 ntBASIC1.82□□□□□ -2.12
CTDNEP1O95476 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
CTDNEP1O95476 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC1.81□□□□□ -2.12
CTDNEP1O95476 SNORD3E-201ENST00000362899 217 ntBASIC1.81□□□□□ -2.12
CTDNEP1O95476 RNU6-181P-201ENST00000363225 107 ntBASIC1.81□□□□□ -2.12
CTDNEP1O95476 RNU6-641P-201ENST00000384006 107 ntBASIC1.81□□□□□ -2.12
CTDNEP1O95476 SNORA40C-201ENST00000391285 128 ntBASIC1.81□□□□□ -2.12
CTDNEP1O95476 CISD1P1-201ENST00000393907 327 ntBASIC1.81□□□□□ -2.12
CTDNEP1O95476 CDK8P2-201ENST00000415020 547 ntBASIC1.81□□□□□ -2.12
CTDNEP1O95476 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.81□□□□□ -2.12
CTDNEP1O95476 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC1.81□□□□□ -2.12
CTDNEP1O95476 AC003685.2-201ENST00000422795 395 ntBASIC1.81□□□□□ -2.12
CTDNEP1O95476 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.81□□□□□ -2.12
CTDNEP1O95476 AC004383.1-201ENST00000438135 289 ntBASIC1.81□□□□□ -2.12
CTDNEP1O95476 BRK1P2-201ENST00000442875 223 ntBASIC1.81□□□□□ -2.12
CTDNEP1O95476 HMGN2P10-201ENST00000448085 265 ntBASIC1.81□□□□□ -2.12
CTDNEP1O95476 MTND1P27-201ENST00000451117 902 ntBASIC1.81□□□□□ -2.12
CTDNEP1O95476 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC1.81□□□□□ -2.12
CTDNEP1O95476 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.81□□□□□ -2.12
CTDNEP1O95476 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.81□□□□□ -2.12
CTDNEP1O95476 AC117522.1-201ENST00000509821 380 ntBASIC1.81□□□□□ -2.12
CTDNEP1O95476 SNORA25.15-201ENST00000516487 89 ntBASIC1.81□□□□□ -2.12
CTDNEP1O95476 RNU6-445P-201ENST00000516949 107 ntBASIC1.81□□□□□ -2.12
CTDNEP1O95476 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC1.81□□□□□ -2.12
CTDNEP1O95476 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC1.81□□□□□ -2.12
CTDNEP1O95476 AP002963.1-201ENST00000530590 184 ntBASIC1.81□□□□□ -2.12
CTDNEP1O95476 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.81□□□□□ -2.12
CTDNEP1O95476 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC1.81□□□□□ -2.12
CTDNEP1O95476 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.81□□□□□ -2.12
CTDNEP1O95476 AC006199.1-201ENST00000548728 219 ntBASIC1.81□□□□□ -2.12
CTDNEP1O95476 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC1.81□□□□□ -2.12
CTDNEP1O95476 AL133241.1-201ENST00000556832 487 ntBASIC1.81□□□□□ -2.12
CTDNEP1O95476 AL157871.3-201ENST00000557231 293 ntBASIC1.81□□□□□ -2.12
CTDNEP1O95476 AC021739.1-201ENST00000559631 174 ntBASIC1.81□□□□□ -2.12
CTDNEP1O95476 AC010928.2-201ENST00000588017 287 ntBASIC1.81□□□□□ -2.12
CTDNEP1O95476 DEFB131E-202ENST00000602581 683 ntBASIC1.81□□□□□ -2.12
CTDNEP1O95476 AL158032.1-201ENST00000605401 106 ntBASIC1.81□□□□□ -2.12
CTDNEP1O95476 AC069294.1-201ENST00000608397 350 ntBASIC1.81□□□□□ -2.12
CTDNEP1O95476 AL627230.6-201ENST00000611129 280 ntBASIC1.81□□□□□ -2.12
CTDNEP1O95476 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC1.81□□□□□ -2.12
CTDNEP1O95476 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
CTDNEP1O95476 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.8□□□□□ -2.12
CTDNEP1O95476 RNA5SP125-201ENST00000364843 120 ntBASIC1.8□□□□□ -2.12
CTDNEP1O95476 SNORD115-7-201ENST00000365306 82 ntBASIC1.8□□□□□ -2.12
CTDNEP1O95476 Y_RNA.576-201ENST00000384781 102 ntBASIC1.8□□□□□ -2.12
CTDNEP1O95476 MIR518D-201ENST00000385014 87 ntBASIC1.8□□□□□ -2.12
CTDNEP1O95476 MIR320A-201ENST00000385302 82 ntBASIC1.8□□□□□ -2.12
CTDNEP1O95476 RNU6-1025P-201ENST00000410629 104 ntBASIC1.8□□□□□ -2.12
CTDNEP1O95476 EEF1A1P40-201ENST00000412883 573 ntBASIC1.8□□□□□ -2.12
CTDNEP1O95476 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC1.8□□□□□ -2.12
CTDNEP1O95476 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC1.8□□□□□ -2.12
CTDNEP1O95476 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.8□□□□□ -2.12
CTDNEP1O95476 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.8□□□□□ -2.12
CTDNEP1O95476 AL160275.3-201ENST00000423876 471 ntBASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 503.4 ms