Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.74
RAPGEF3O95398 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC4.15□□□□□ -1.75
RAPGEF3O95398 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
RAPGEF3O95398 AL356057.2-201ENST00000403318 432 ntBASIC4.15□□□□□ -1.75
RAPGEF3O95398 MIR1302-11-201ENST00000408051 138 ntBASIC4.15□□□□□ -1.75
RAPGEF3O95398 MIR1302-9-201ENST00000408365 138 ntBASIC4.15□□□□□ -1.75
RAPGEF3O95398 MIR1302-10-201ENST00000408734 138 ntBASIC4.15□□□□□ -1.75
RAPGEF3O95398 Y_RNA.623-201ENST00000411128 95 ntBASIC4.15□□□□□ -1.75
RAPGEF3O95398 RHEBP3-201ENST00000411920 351 ntBASIC4.15□□□□□ -1.75
RAPGEF3O95398 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC4.15□□□□□ -1.75
RAPGEF3O95398 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC4.15□□□□□ -1.75
RAPGEF3O95398 SKA2P1-201ENST00000425592 390 ntBASIC4.15□□□□□ -1.75
RAPGEF3O95398 AL645568.3-201ENST00000433683 316 ntBASIC4.15□□□□□ -1.75
RAPGEF3O95398 AC130509.1-201ENST00000464158 433 ntBASIC4.15□□□□□ -1.75
RAPGEF3O95398 AC096745.1-201ENST00000509945 370 ntBASIC4.15□□□□□ -1.75
RAPGEF3O95398 AL442663.2-201ENST00000554385 511 ntBASIC4.15□□□□□ -1.75
RAPGEF3O95398 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC4.15□□□□□ -1.75
RAPGEF3O95398 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC4.15□□□□□ -1.75
RAPGEF3O95398 NUTF2P8-201ENST00000604593 363 ntBASIC4.15□□□□□ -1.75
RAPGEF3O95398 RNU6-85P-201ENST00000605989 107 ntBASIC4.15□□□□□ -1.75
RAPGEF3O95398 MIR1302-2-201ENST00000607096 138 ntBASIC4.15□□□□□ -1.75
RAPGEF3O95398 FTX_3.1-201ENST00000610451 147 ntBASIC4.15□□□□□ -1.75
RAPGEF3O95398 AC010378.1-201ENST00000619270 362 ntBASIC4.15□□□□□ -1.75
RAPGEF3O95398 CTSLP2-204ENST00000629029 392 ntBASIC4.15□□□□□ -1.75
RAPGEF3O95398 AL353746.1-201ENST00000566293 6881 ntBASIC4.14□□□□□ -1.75
RAPGEF3O95398 SNORD114-30-201ENST00000364448 72 ntBASIC4.14□□□□□ -1.75
RAPGEF3O95398 SNORD14B-201ENST00000364533 90 ntBASIC4.14□□□□□ -1.75
RAPGEF3O95398 Y_RNA.259-201ENST00000364619 101 ntBASIC4.14□□□□□ -1.75
RAPGEF3O95398 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC4.14□□□□□ -1.75
RAPGEF3O95398 MTCYBP4-201ENST00000401524 249 ntBASIC4.14□□□□□ -1.75
RAPGEF3O95398 RNU6-55P-201ENST00000411092 107 ntBASIC4.14□□□□□ -1.75
RAPGEF3O95398 RNU6-954P-201ENST00000411355 107 ntBASIC4.14□□□□□ -1.75
RAPGEF3O95398 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC4.14□□□□□ -1.75
RAPGEF3O95398 RPS15AP6-201ENST00000420703 385 ntBASIC4.14□□□□□ -1.75
RAPGEF3O95398 AC098614.2-201ENST00000426040 255 ntBASIC4.14□□□□□ -1.75
RAPGEF3O95398 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
RAPGEF3O95398 AC104472.2-201ENST00000469035 601 ntBASIC4.14□□□□□ -1.75
RAPGEF3O95398 SNORA31.19-201ENST00000517079 126 ntBASIC4.14□□□□□ -1.75
RAPGEF3O95398 RNU6-548P-201ENST00000517083 115 ntBASIC4.14□□□□□ -1.75
RAPGEF3O95398 AC025423.5-201ENST00000550230 219 ntBASIC4.14□□□□□ -1.75
RAPGEF3O95398 HMGB1P14-201ENST00000557424 591 ntBASIC4.14□□□□□ -1.75
RAPGEF3O95398 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC4.14□□□□□ -1.75
RAPGEF3O95398 OR1M4P-201ENST00000589199 287 ntBASIC4.14□□□□□ -1.75
RAPGEF3O95398 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC4.14□□□□□ -1.75
RAPGEF3O95398 AL355598.1-201ENST00000604169 202 ntBASIC4.14□□□□□ -1.75
RAPGEF3O95398 AC002076.2-201ENST00000617362 122 ntBASIC4.14□□□□□ -1.75
RAPGEF3O95398 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
RAPGEF3O95398 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
RAPGEF3O95398 MTND4P23-201ENST00000447723 1363 ntBASIC4.14□□□□□ -1.75
RAPGEF3O95398 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
RAPGEF3O95398 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
RAPGEF3O95398 ZNF736P3Y-201ENST00000428264 1465 ntBASIC4.13□□□□□ -1.75
RAPGEF3O95398 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
RAPGEF3O95398 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
RAPGEF3O95398 MIR591-201ENST00000385290 95 ntBASIC4.13□□□□□ -1.75
RAPGEF3O95398 RNU4-14P-201ENST00000410858 122 ntBASIC4.13□□□□□ -1.75
RAPGEF3O95398 RNU6-293P-201ENST00000411259 106 ntBASIC4.13□□□□□ -1.75
RAPGEF3O95398 RPL7P37-201ENST00000425095 738 ntBASIC4.13□□□□□ -1.75
RAPGEF3O95398 HMGB1P9-201ENST00000429856 646 ntBASIC4.13□□□□□ -1.75
RAPGEF3O95398 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC4.13□□□□□ -1.75
RAPGEF3O95398 AL078601.1-201ENST00000444542 271 ntBASIC4.13□□□□□ -1.75
RAPGEF3O95398 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC4.13□□□□□ -1.75
RAPGEF3O95398 AC007677.1-201ENST00000445757 515 ntBASIC4.13□□□□□ -1.75
RAPGEF3O95398 RNU7-170P-201ENST00000459303 61 ntBASIC4.13□□□□□ -1.75
RAPGEF3O95398 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC4.13□□□□□ -1.75
RAPGEF3O95398 AC139453.3-201ENST00000493276 369 ntBASIC4.13□□□□□ -1.75
RAPGEF3O95398 Y_RNA.718-201ENST00000517110 102 ntBASIC4.13□□□□□ -1.75
RAPGEF3O95398 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC4.13□□□□□ -1.75
RAPGEF3O95398 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC4.13□□□□□ -1.75
RAPGEF3O95398 MIR4648-201ENST00000580107 72 ntBASIC4.13□□□□□ -1.75
RAPGEF3O95398 MIR5690-201ENST00000583739 73 ntBASIC4.13□□□□□ -1.75
RAPGEF3O95398 AP000787.2-201ENST00000604432 568 ntBASIC4.13□□□□□ -1.75
RAPGEF3O95398 AC007742.2-201ENST00000618226 398 ntBASIC4.13□□□□□ -1.75
RAPGEF3O95398 XIST_intron.1-201ENST00000619444 68 ntBASIC4.13□□□□□ -1.75
RAPGEF3O95398 AC099654.10-201ENST00000640395 161 ntBASIC4.13□□□□□ -1.75
RAPGEF3O95398 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
RAPGEF3O95398 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.13□□□□□ -1.75
RAPGEF3O95398 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC4.13□□□□□ -1.75
RAPGEF3O95398 TTN-204ENST00000360870 18218 ntTSL 5 BASIC4.13□□□□□ -1.75
RAPGEF3O95398 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
RAPGEF3O95398 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.13□□□□□ -1.75
RAPGEF3O95398 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
RAPGEF3O95398 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
RAPGEF3O95398 AC138393.1-203ENST00000327086 343 ntBASIC4.12□□□□□ -1.75
RAPGEF3O95398 SNORD3E-201ENST00000362899 217 ntBASIC4.12□□□□□ -1.75
RAPGEF3O95398 RNU6-384P-201ENST00000364900 104 ntBASIC4.12□□□□□ -1.75
RAPGEF3O95398 RNU6-1329P-201ENST00000365664 107 ntBASIC4.12□□□□□ -1.75
RAPGEF3O95398 Y_RNA.419-201ENST00000384041 102 ntBASIC4.12□□□□□ -1.75
RAPGEF3O95398 RN7SKP223-201ENST00000410582 62 ntBASIC4.12□□□□□ -1.75
RAPGEF3O95398 RNU4-53P-201ENST00000410828 140 ntBASIC4.12□□□□□ -1.75
RAPGEF3O95398 AL096701.2-201ENST00000416920 238 ntBASIC4.12□□□□□ -1.75
RAPGEF3O95398 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC4.12□□□□□ -1.75
RAPGEF3O95398 AL583843.1-201ENST00000456070 346 ntBASIC4.12□□□□□ -1.75
RAPGEF3O95398 HMGN1P18-201ENST00000457642 277 ntBASIC4.12□□□□□ -1.75
RAPGEF3O95398 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
RAPGEF3O95398 RNU6-1170P-201ENST00000515974 106 ntBASIC4.12□□□□□ -1.75
RAPGEF3O95398 AP005597.4-201ENST00000526762 229 ntBASIC4.12□□□□□ -1.75
RAPGEF3O95398 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC4.12□□□□□ -1.75
RAPGEF3O95398 AL133215.3-201ENST00000609801 448 ntBASIC4.12□□□□□ -1.75
RAPGEF3O95398 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms