Protein–RNA interactions for Protein: O75400

PRPF40A, Pre-mRNA-processing factor 40 homolog A, humanhuman

Known RBP Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40AO75400 RPL21P40-201ENST00000428586 483 ntBASIC4.38□□□□□ -1.71
PRPF40AO75400 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC4.38□□□□□ -1.71
PRPF40AO75400 snoU13.30-201ENST00000458951 104 ntBASIC4.38□□□□□ -1.71
PRPF40AO75400 RNU6-397P-201ENST00000516226 104 ntBASIC4.38□□□□□ -1.71
PRPF40AO75400 AC007458.1-201ENST00000542812 373 ntBASIC4.38□□□□□ -1.71
PRPF40AO75400 AC006199.1-201ENST00000548728 219 ntBASIC4.38□□□□□ -1.71
PRPF40AO75400 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC4.38□□□□□ -1.71
PRPF40AO75400 HMGN2P15-201ENST00000585707 270 ntBASIC4.38□□□□□ -1.71
PRPF40AO75400 AC024220.1-201ENST00000603675 484 ntBASIC4.38□□□□□ -1.71
PRPF40AO75400 RAC1P9-201ENST00000604990 392 ntBASIC4.38□□□□□ -1.71
PRPF40AO75400 DLEU2_2.2-201ENST00000615474 90 ntBASIC4.38□□□□□ -1.71
PRPF40AO75400 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.38□□□□□ -1.71
PRPF40AO75400 SCARNA4-201ENST00000629045 128 ntBASIC4.38□□□□□ -1.71
PRPF40AO75400 MIR3529-201ENST00000637713 78 ntBASIC4.38□□□□□ -1.71
PRPF40AO75400 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.38□□□□□ -1.71
PRPF40AO75400 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PRPF40AO75400 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.38□□□□□ -1.71
PRPF40AO75400 CEP170P1-201ENST00000502249 4587 ntBASIC4.38□□□□□ -1.71
PRPF40AO75400 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PRPF40AO75400 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PRPF40AO75400 Z75746.1-201ENST00000440243 2080 ntBASIC4.37□□□□□ -1.71
PRPF40AO75400 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PRPF40AO75400 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC4.37□□□□□ -1.71
PRPF40AO75400 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.37□□□□□ -1.71
PRPF40AO75400 AC007496.3-201ENST00000624987 3443 ntBASIC4.37□□□□□ -1.71
PRPF40AO75400 RNU1-76P-201ENST00000362903 159 ntBASIC4.37□□□□□ -1.71
PRPF40AO75400 RNU6-1286P-201ENST00000383871 107 ntBASIC4.37□□□□□ -1.71
PRPF40AO75400 RNU6-142P-201ENST00000384019 107 ntBASIC4.37□□□□□ -1.71
PRPF40AO75400 MIR199A2-201ENST00000385289 110 ntBASIC4.37□□□□□ -1.71
PRPF40AO75400 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
PRPF40AO75400 RPL21P1-201ENST00000399532 476 ntBASIC4.37□□□□□ -1.71
PRPF40AO75400 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.37□□□□□ -1.71
PRPF40AO75400 NDUFB1P1-201ENST00000435191 180 ntBASIC4.37□□□□□ -1.71
PRPF40AO75400 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC4.37□□□□□ -1.71
PRPF40AO75400 AL031659.1-201ENST00000447075 539 ntBASIC4.37□□□□□ -1.71
PRPF40AO75400 TOMM22P6-201ENST00000465035 409 ntBASIC4.37□□□□□ -1.71
PRPF40AO75400 AC097462.2-201ENST00000504623 481 ntBASIC4.37□□□□□ -1.71
PRPF40AO75400 MTND4LP22-201ENST00000508209 276 ntBASIC4.37□□□□□ -1.71
PRPF40AO75400 AC074250.1-201ENST00000511117 192 ntBASIC4.37□□□□□ -1.71
PRPF40AO75400 SNORA25.11-201ENST00000515935 105 ntBASIC4.37□□□□□ -1.71
PRPF40AO75400 SNORA70.14-201ENST00000516205 110 ntBASIC4.37□□□□□ -1.71
PRPF40AO75400 RNY3P15-201ENST00000516297 97 ntBASIC4.37□□□□□ -1.71
PRPF40AO75400 RNU6-1271P-201ENST00000517049 105 ntBASIC4.37□□□□□ -1.71
PRPF40AO75400 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.37□□□□□ -1.71
PRPF40AO75400 AC106785.1-201ENST00000565935 262 ntBASIC4.37□□□□□ -1.71
PRPF40AO75400 AL356157.2-201ENST00000605122 111 ntBASIC4.37□□□□□ -1.71
PRPF40AO75400 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.37□□□□□ -1.71
PRPF40AO75400 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PRPF40AO75400 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PRPF40AO75400 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PRPF40AO75400 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
PRPF40AO75400 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.36□□□□□ -1.71
PRPF40AO75400 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PRPF40AO75400 RNU1-64P-201ENST00000365443 163 ntBASIC4.36□□□□□ -1.71
PRPF40AO75400 MIR544A-201ENST00000384855 91 ntBASIC4.36□□□□□ -1.71
PRPF40AO75400 MT-TG-201ENST00000387429 68 ntBASIC4.36□□□□□ -1.71
PRPF40AO75400 AL356968.1-201ENST00000416622 474 ntBASIC4.36□□□□□ -1.71
PRPF40AO75400 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC4.36□□□□□ -1.71
PRPF40AO75400 CBX3P6-201ENST00000430257 527 ntBASIC4.36□□□□□ -1.71
PRPF40AO75400 Z82188.1-201ENST00000436709 154 ntBASIC4.36□□□□□ -1.71
PRPF40AO75400 AC009296.1-201ENST00000443146 155 ntBASIC4.36□□□□□ -1.71
PRPF40AO75400 RPL21P11-201ENST00000461458 483 ntBASIC4.36□□□□□ -1.71
PRPF40AO75400 PPIAP15-201ENST00000479662 484 ntBASIC4.36□□□□□ -1.71
PRPF40AO75400 AC104564.1-201ENST00000493028 407 ntBASIC4.36□□□□□ -1.71
PRPF40AO75400 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.36□□□□□ -1.71
PRPF40AO75400 RNU5F-8P-201ENST00000515941 111 ntBASIC4.36□□□□□ -1.71
PRPF40AO75400 RNU6-1143P-201ENST00000516125 104 ntBASIC4.36□□□□□ -1.71
PRPF40AO75400 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC4.36□□□□□ -1.71
PRPF40AO75400 IGHV3-76-201ENST00000522465 295 ntBASIC4.36□□□□□ -1.71
PRPF40AO75400 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC4.36□□□□□ -1.71
PRPF40AO75400 AC090517.1-201ENST00000569307 266 ntBASIC4.36□□□□□ -1.71
PRPF40AO75400 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC4.36□□□□□ -1.71
PRPF40AO75400 KLKP1-201ENST00000595979 403 ntBASIC4.36□□□□□ -1.71
PRPF40AO75400 AC090425.1-201ENST00000610007 140 ntBASIC4.36□□□□□ -1.71
PRPF40AO75400 MIR6875-201ENST00000617506 72 ntBASIC4.36□□□□□ -1.71
PRPF40AO75400 MIR8062-201ENST00000621515 85 ntBASIC4.36□□□□□ -1.71
PRPF40AO75400 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC4.36□□□□□ -1.71
PRPF40AO75400 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PRPF40AO75400 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
PRPF40AO75400 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC4.36□□□□□ -1.71
PRPF40AO75400 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC4.36□□□□□ -1.71
PRPF40AO75400 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
PRPF40AO75400 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.35□□□□□ -1.71
PRPF40AO75400 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
PRPF40AO75400 Y_RNA.27-201ENST00000362540 103 ntBASIC4.35□□□□□ -1.71
PRPF40AO75400 RNU6-1222P-201ENST00000384615 107 ntBASIC4.35□□□□□ -1.71
PRPF40AO75400 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC4.35□□□□□ -1.71
PRPF40AO75400 AC007969.2-201ENST00000441891 191 ntBASIC4.35□□□□□ -1.71
PRPF40AO75400 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC4.35□□□□□ -1.71
PRPF40AO75400 PCNPP5-201ENST00000452246 481 ntBASIC4.35□□□□□ -1.71
PRPF40AO75400 RPL23AP75-201ENST00000491601 451 ntBASIC4.35□□□□□ -1.71
PRPF40AO75400 ANXA2P1-201ENST00000505539 926 ntBASIC4.35□□□□□ -1.71
PRPF40AO75400 AC109329.1-201ENST00000518744 317 ntBASIC4.35□□□□□ -1.71
PRPF40AO75400 AC034114.1-201ENST00000520293 285 ntBASIC4.35□□□□□ -1.71
PRPF40AO75400 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
PRPF40AO75400 AP000867.2-201ENST00000532468 320 ntBASIC4.35□□□□□ -1.71
PRPF40AO75400 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.35□□□□□ -1.71
PRPF40AO75400 AC007375.1-201ENST00000554513 578 ntBASIC4.35□□□□□ -1.71
PRPF40AO75400 MIR4286-201ENST00000580651 93 ntBASIC4.35□□□□□ -1.71
PRPF40AO75400 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 136.8 ms