Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
PTCD1O75127 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
PTCD1O75127 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
PTCD1O75127 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.84□□□□□ -1.63
PTCD1O75127 AC009541.1-201ENST00000438279 2662 ntBASIC4.84□□□□□ -1.63
PTCD1O75127 RNU6-1197P-201ENST00000391183 107 ntBASIC4.84□□□□□ -1.63
PTCD1O75127 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC4.84□□□□□ -1.63
PTCD1O75127 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC4.84□□□□□ -1.63
PTCD1O75127 AC096920.1-201ENST00000423991 241 ntBASIC4.84□□□□□ -1.63
PTCD1O75127 AL591043.1-201ENST00000432461 424 ntBASIC4.84□□□□□ -1.63
PTCD1O75127 AL512844.2-201ENST00000433990 593 ntBASIC4.84□□□□□ -1.63
PTCD1O75127 AL513124.1-201ENST00000450410 614 ntBASIC4.84□□□□□ -1.63
PTCD1O75127 TOMM22P6-201ENST00000465035 409 ntBASIC4.84□□□□□ -1.63
PTCD1O75127 RPL31P61-201ENST00000496160 376 ntBASIC4.84□□□□□ -1.63
PTCD1O75127 AC010265.1-201ENST00000513509 211 ntBASIC4.84□□□□□ -1.63
PTCD1O75127 RNA5SP208-201ENST00000516156 78 ntBASIC4.84□□□□□ -1.63
PTCD1O75127 SCARNA24.2-201ENST00000516968 130 ntBASIC4.84□□□□□ -1.63
PTCD1O75127 CASP1P1-201ENST00000526345 212 ntBASIC4.84□□□□□ -1.63
PTCD1O75127 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC4.84□□□□□ -1.63
PTCD1O75127 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC4.84□□□□□ -1.63
PTCD1O75127 AC093023.1-201ENST00000547375 507 ntBASIC4.84□□□□□ -1.63
PTCD1O75127 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4.84□□□□□ -1.63
PTCD1O75127 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC4.84□□□□□ -1.63
PTCD1O75127 U6.92-201ENST00000636464 89 ntBASIC4.84□□□□□ -1.63
PTCD1O75127 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.84□□□□□ -1.63
PTCD1O75127 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
PTCD1O75127 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
PTCD1O75127 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
PTCD1O75127 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.64
PTCD1O75127 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PTCD1O75127 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PTCD1O75127 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
PTCD1O75127 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PTCD1O75127 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC4.83□□□□□ -1.64
PTCD1O75127 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.83□□□□□ -1.64
PTCD1O75127 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.83□□□□□ -1.64
PTCD1O75127 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC4.83□□□□□ -1.64
PTCD1O75127 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.83□□□□□ -1.64
PTCD1O75127 FTLP6-201ENST00000355274 422 ntBASIC4.83□□□□□ -1.64
PTCD1O75127 RNU6-105P-201ENST00000363909 104 ntBASIC4.83□□□□□ -1.64
PTCD1O75127 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PTCD1O75127 Y_RNA.439-201ENST00000384119 94 ntBASIC4.83□□□□□ -1.64
PTCD1O75127 RNU6-804P-201ENST00000384286 107 ntBASIC4.83□□□□□ -1.64
PTCD1O75127 Y_RNA.541-201ENST00000384640 113 ntBASIC4.83□□□□□ -1.64
PTCD1O75127 SNORD115-46-201ENST00000390982 71 ntBASIC4.83□□□□□ -1.64
PTCD1O75127 U3.37-201ENST00000408528 213 ntBASIC4.83□□□□□ -1.64
PTCD1O75127 RNA5SP31-201ENST00000411144 127 ntBASIC4.83□□□□□ -1.64
PTCD1O75127 RPL21P40-201ENST00000428586 483 ntBASIC4.83□□□□□ -1.64
PTCD1O75127 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC4.83□□□□□ -1.64
PTCD1O75127 RNU6-1183P-201ENST00000517054 60 ntBASIC4.83□□□□□ -1.64
PTCD1O75127 SYF2P1-201ENST00000550658 413 ntBASIC4.83□□□□□ -1.64
PTCD1O75127 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.83□□□□□ -1.64
PTCD1O75127 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.83□□□□□ -1.64
PTCD1O75127 CYCSP39-201ENST00000565821 309 ntBASIC4.83□□□□□ -1.64
PTCD1O75127 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC4.83□□□□□ -1.64
PTCD1O75127 MIR5195-201ENST00000583555 115 ntBASIC4.83□□□□□ -1.64
PTCD1O75127 AC060766.3-201ENST00000591442 263 ntBASIC4.83□□□□□ -1.64
PTCD1O75127 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
PTCD1O75127 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
PTCD1O75127 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
PTCD1O75127 HAUS6P2-201ENST00000433254 2404 ntBASIC4.83□□□□□ -1.64
PTCD1O75127 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PTCD1O75127 AC233981.2-201ENST00000611524 1614 ntBASIC4.83□□□□□ -1.64
PTCD1O75127 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PTCD1O75127 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.82□□□□□ -1.64
PTCD1O75127 RNU6-858P-201ENST00000362436 107 ntBASIC4.82□□□□□ -1.64
PTCD1O75127 SNORD50.2-201ENST00000365465 70 ntBASIC4.82□□□□□ -1.64
PTCD1O75127 MRPL35P1-201ENST00000404272 572 ntBASIC4.82□□□□□ -1.64
PTCD1O75127 RNU2-51P-201ENST00000410708 197 ntBASIC4.82□□□□□ -1.64
PTCD1O75127 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.82□□□□□ -1.64
PTCD1O75127 AC092047.1-201ENST00000424997 240 ntBASIC4.82□□□□□ -1.64
PTCD1O75127 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC4.82□□□□□ -1.64
PTCD1O75127 AL445305.1-201ENST00000432577 575 ntBASIC4.82□□□□□ -1.64
PTCD1O75127 Z82188.1-201ENST00000436709 154 ntBASIC4.82□□□□□ -1.64
PTCD1O75127 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC4.82□□□□□ -1.64
PTCD1O75127 BX510359.1-201ENST00000456973 237 ntBASIC4.82□□□□□ -1.64
PTCD1O75127 U8.22-201ENST00000459141 133 ntBASIC4.82□□□□□ -1.64
PTCD1O75127 AC078817.1-201ENST00000492623 435 ntBASIC4.82□□□□□ -1.64
PTCD1O75127 SERF1AP1-201ENST00000514575 187 ntBASIC4.82□□□□□ -1.64
PTCD1O75127 MIR4300-201ENST00000581016 96 ntBASIC4.82□□□□□ -1.64
PTCD1O75127 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
PTCD1O75127 AC241585.2-209ENST00000638217 143 ntBASIC4.82□□□□□ -1.64
PTCD1O75127 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PTCD1O75127 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.82□□□□□ -1.64
PTCD1O75127 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC4.82□□□□□ -1.64
PTCD1O75127 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PTCD1O75127 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PTCD1O75127 AC011266.1-201ENST00000624119 3569 ntBASIC4.81□□□□□ -1.64
PTCD1O75127 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
PTCD1O75127 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PTCD1O75127 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
PTCD1O75127 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PTCD1O75127 SNORD9-201ENST00000362566 104 ntBASIC4.81□□□□□ -1.64
PTCD1O75127 RNU6-898P-201ENST00000365627 104 ntBASIC4.81□□□□□ -1.64
PTCD1O75127 MIR607-201ENST00000385241 96 ntBASIC4.81□□□□□ -1.64
PTCD1O75127 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
PTCD1O75127 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
PTCD1O75127 RPL31P13-201ENST00000484151 370 ntBASIC4.81□□□□□ -1.64
PTCD1O75127 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC4.81□□□□□ -1.64
PTCD1O75127 ANXA2P1-201ENST00000505539 926 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 123.7 ms