Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.63□□□□□ -2.31
PFDN1O60925 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC0.63□□□□□ -2.31
PFDN1O60925 MTND4P21-201ENST00000453886 1357 ntBASIC0.62□□□□□ -2.31
PFDN1O60925 RNU6-942P-201ENST00000363002 107 ntBASIC0.62□□□□□ -2.31
PFDN1O60925 MIR222-201ENST00000384992 110 ntBASIC0.62□□□□□ -2.31
PFDN1O60925 MIR605-201ENST00000385078 83 ntBASIC0.62□□□□□ -2.31
PFDN1O60925 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC0.62□□□□□ -2.31
PFDN1O60925 RPS15AP12-201ENST00000419498 388 ntBASIC0.62□□□□□ -2.31
PFDN1O60925 AC010099.3-201ENST00000423896 409 ntBASIC0.62□□□□□ -2.31
PFDN1O60925 SNX2P2-201ENST00000424553 323 ntBASIC0.62□□□□□ -2.31
PFDN1O60925 FO393414.1-201ENST00000428697 1184 ntBASIC0.62□□□□□ -2.31
PFDN1O60925 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC0.62□□□□□ -2.31
PFDN1O60925 TIMM9P1-201ENST00000436122 256 ntBASIC0.62□□□□□ -2.31
PFDN1O60925 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC0.62□□□□□ -2.31
PFDN1O60925 snoU13.30-201ENST00000458951 104 ntBASIC0.62□□□□□ -2.31
PFDN1O60925 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.62□□□□□ -2.31
PFDN1O60925 RNU6-143P-201ENST00000516942 93 ntBASIC0.62□□□□□ -2.31
PFDN1O60925 RNA5SP503-201ENST00000517047 117 ntBASIC0.62□□□□□ -2.31
PFDN1O60925 RNU6-64P-201ENST00000517119 105 ntBASIC0.62□□□□□ -2.31
PFDN1O60925 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC0.62□□□□□ -2.31
PFDN1O60925 AC087441.2-201ENST00000529141 262 ntBASIC0.62□□□□□ -2.31
PFDN1O60925 BNIP3P31-201ENST00000604515 566 ntBASIC0.62□□□□□ -2.31
PFDN1O60925 AC026741.1-201ENST00000605892 482 ntBASIC0.62□□□□□ -2.31
PFDN1O60925 MIR8084-201ENST00000614105 89 ntBASIC0.62□□□□□ -2.31
PFDN1O60925 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC0.62□□□□□ -2.31
PFDN1O60925 AC231657.1-201ENST00000624313 397 ntBASIC0.62□□□□□ -2.31
PFDN1O60925 RNU5B-1-201ENST00000363286 116 ntBASIC0.61□□□□□ -2.31
PFDN1O60925 RNU6-457P-201ENST00000363999 107 ntBASIC0.61□□□□□ -2.31
PFDN1O60925 MIR520A-201ENST00000384862 85 ntBASIC0.61□□□□□ -2.31
PFDN1O60925 MIR19A-201ENST00000384878 82 ntBASIC0.61□□□□□ -2.31
PFDN1O60925 MIR532-201ENST00000385025 91 ntBASIC0.61□□□□□ -2.31
PFDN1O60925 FCF1P10-201ENST00000407590 479 ntBASIC0.61□□□□□ -2.31
PFDN1O60925 RNU2-23P-201ENST00000410545 195 ntBASIC0.61□□□□□ -2.31
PFDN1O60925 AC004965.1-201ENST00000413033 213 ntBASIC0.61□□□□□ -2.31
PFDN1O60925 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC0.61□□□□□ -2.31
PFDN1O60925 NDUFAF4P2-201ENST00000445374 520 ntBASIC0.61□□□□□ -2.31
PFDN1O60925 snoU109.2-201ENST00000459316 135 ntBASIC0.61□□□□□ -2.31
PFDN1O60925 SNORD124-201ENST00000459577 104 ntBASIC0.61□□□□□ -2.31
PFDN1O60925 RNU5A-4P-201ENST00000516588 111 ntBASIC0.61□□□□□ -2.31
PFDN1O60925 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC0.61□□□□□ -2.31
PFDN1O60925 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC0.61□□□□□ -2.31
PFDN1O60925 MIR5708-201ENST00000579723 85 ntBASIC0.61□□□□□ -2.31
PFDN1O60925 AL358072.1-201ENST00000604156 575 ntBASIC0.61□□□□□ -2.31
PFDN1O60925 AL451064.1-201ENST00000607718 471 ntBASIC0.61□□□□□ -2.31
PFDN1O60925 RNU6ATAC35P-201ENST00000609276 444 ntBASIC0.61□□□□□ -2.31
PFDN1O60925 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC0.61□□□□□ -2.31
PFDN1O60925 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.61□□□□□ -2.31
PFDN1O60925 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.61□□□□□ -2.31
PFDN1O60925 SNORA4.3-201ENST00000365564 137 ntBASIC0.6□□□□□ -2.31
PFDN1O60925 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC0.6□□□□□ -2.31
PFDN1O60925 SNORA75B-201ENST00000384053 137 ntBASIC0.6□□□□□ -2.31
PFDN1O60925 MIR194-1-201ENST00000384892 85 ntBASIC0.6□□□□□ -2.31
PFDN1O60925 UBE2V1P15-201ENST00000407776 448 ntBASIC0.6□□□□□ -2.31
PFDN1O60925 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.6□□□□□ -2.31
PFDN1O60925 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC0.6□□□□□ -2.31
PFDN1O60925 RNU7-95P-201ENST00000459222 64 ntBASIC0.6□□□□□ -2.31
PFDN1O60925 AC104563.1-201ENST00000476147 376 ntBASIC0.6□□□□□ -2.31
PFDN1O60925 HMGN2P9-201ENST00000476875 229 ntBASIC0.6□□□□□ -2.31
PFDN1O60925 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC0.6□□□□□ -2.31
PFDN1O60925 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC0.6□□□□□ -2.31
PFDN1O60925 AC121161.1-201ENST00000510606 652 ntBASIC0.6□□□□□ -2.31
PFDN1O60925 RNU1-41P-201ENST00000516161 162 ntBASIC0.6□□□□□ -2.31
PFDN1O60925 RNU1-48P-201ENST00000516400 162 ntBASIC0.6□□□□□ -2.31
PFDN1O60925 RPS3AP4-201ENST00000555161 764 ntBASIC0.6□□□□□ -2.31
PFDN1O60925 AC092325.1-201ENST00000566449 554 ntBASIC0.6□□□□□ -2.31
PFDN1O60925 MIR3664-201ENST00000579074 99 ntBASIC0.6□□□□□ -2.31
PFDN1O60925 VN1R80P-201ENST00000597126 338 ntBASIC0.6□□□□□ -2.31
PFDN1O60925 AC022022.2-201ENST00000602989 360 ntBASIC0.6□□□□□ -2.31
PFDN1O60925 AC025811.1-201ENST00000604312 472 ntBASIC0.6□□□□□ -2.31
PFDN1O60925 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC0.6□□□□□ -2.31
PFDN1O60925 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.6□□□□□ -2.31
PFDN1O60925 AP000676.3-201ENST00000623299 569 ntBASIC0.6□□□□□ -2.31
PFDN1O60925 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.59□□□□□ -2.31
PFDN1O60925 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.59□□□□□ -2.31
PFDN1O60925 MIR340-201ENST00000362125 95 ntBASIC0.59□□□□□ -2.31
PFDN1O60925 Y_RNA.500-201ENST00000384466 111 ntBASIC0.59□□□□□ -2.31
PFDN1O60925 MIR92A1-201ENST00000385233 78 ntBASIC0.59□□□□□ -2.31
PFDN1O60925 SNORA11-201ENST00000408789 128 ntBASIC0.59□□□□□ -2.31
PFDN1O60925 RNU6-1025P-201ENST00000410629 104 ntBASIC0.59□□□□□ -2.31
PFDN1O60925 RNU2-7P-201ENST00000410794 178 ntBASIC0.59□□□□□ -2.31
PFDN1O60925 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC0.59□□□□□ -2.31
PFDN1O60925 TXNL1P1-201ENST00000429528 554 ntBASIC0.59□□□□□ -2.31
PFDN1O60925 CBX3P6-201ENST00000430257 527 ntBASIC0.59□□□□□ -2.31
PFDN1O60925 FTH1P12-201ENST00000432137 551 ntBASIC0.59□□□□□ -2.31
PFDN1O60925 AC099677.2-201ENST00000436385 175 ntBASIC0.59□□□□□ -2.31
PFDN1O60925 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC0.59□□□□□ -2.31
PFDN1O60925 snoU13.14-201ENST00000459372 104 ntBASIC0.59□□□□□ -2.31
PFDN1O60925 HMGB1P30-201ENST00000492455 606 ntBASIC0.59□□□□□ -2.31
PFDN1O60925 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC0.59□□□□□ -2.31
PFDN1O60925 RNA5SP490-201ENST00000517141 136 ntBASIC0.59□□□□□ -2.31
PFDN1O60925 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC0.59□□□□□ -2.31
PFDN1O60925 MTCO3P15-201ENST00000526563 574 ntBASIC0.59□□□□□ -2.31
PFDN1O60925 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC0.59□□□□□ -2.31
PFDN1O60925 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.59□□□□□ -2.31
PFDN1O60925 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.59□□□□□ -2.31
PFDN1O60925 AC007363.1-201ENST00000604736 620 ntBASIC0.59□□□□□ -2.31
PFDN1O60925 AC091895.1-201ENST00000624494 256 ntBASIC0.59□□□□□ -2.31
PFDN1O60925 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC0.58□□□□□ -2.32
PFDN1O60925 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
PFDN1O60925 Y_RNA.255-201ENST00000364581 97 ntBASIC0.58□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms