Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 AL117351.1-201ENST00000438864 766 ntBASIC1.45□□□□□ -2.18
SHOX2O60902 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC1.45□□□□□ -2.18
SHOX2O60902 SNORA44.1-201ENST00000517031 108 ntBASIC1.45□□□□□ -2.18
SHOX2O60902 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.45□□□□□ -2.18
SHOX2O60902 MIR544B-201ENST00000582372 78 ntBASIC1.45□□□□□ -2.18
SHOX2O60902 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
SHOX2O60902 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC1.45□□□□□ -2.18
SHOX2O60902 uc_338.15-201ENST00000615470 191 ntBASIC1.45□□□□□ -2.18
SHOX2O60902 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
SHOX2O60902 SNORA4.1-201ENST00000364263 144 ntBASIC1.44□□□□□ -2.18
SHOX2O60902 SNORD116.1-201ENST00000365628 92 ntBASIC1.44□□□□□ -2.18
SHOX2O60902 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.44□□□□□ -2.18
SHOX2O60902 Y_RNA.393-201ENST00000383936 102 ntBASIC1.44□□□□□ -2.18
SHOX2O60902 RNU6-843P-201ENST00000384454 104 ntBASIC1.44□□□□□ -2.18
SHOX2O60902 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
SHOX2O60902 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.44□□□□□ -2.18
SHOX2O60902 MIR1323-201ENST00000408090 73 ntBASIC1.44□□□□□ -2.18
SHOX2O60902 AC019070.1-201ENST00000415008 1024 ntBASIC1.44□□□□□ -2.18
SHOX2O60902 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
SHOX2O60902 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC1.44□□□□□ -2.18
SHOX2O60902 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.44□□□□□ -2.18
SHOX2O60902 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC1.44□□□□□ -2.18
SHOX2O60902 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC1.44□□□□□ -2.18
SHOX2O60902 RPS29P29-201ENST00000456396 171 ntBASIC1.44□□□□□ -2.18
SHOX2O60902 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.44□□□□□ -2.18
SHOX2O60902 RNU7-95P-201ENST00000459222 64 ntBASIC1.44□□□□□ -2.18
SHOX2O60902 RNU6-914P-201ENST00000516749 109 ntBASIC1.44□□□□□ -2.18
SHOX2O60902 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.44□□□□□ -2.18
SHOX2O60902 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC1.44□□□□□ -2.18
SHOX2O60902 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.44□□□□□ -2.18
SHOX2O60902 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC1.44□□□□□ -2.18
SHOX2O60902 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.44□□□□□ -2.18
SHOX2O60902 BNIP3P30-201ENST00000601184 574 ntBASIC1.44□□□□□ -2.18
SHOX2O60902 BCRP9-201ENST00000605312 388 ntBASIC1.44□□□□□ -2.18
SHOX2O60902 MIR502-201ENST00000606349 86 ntBASIC1.44□□□□□ -2.18
SHOX2O60902 AC022893.3-201ENST00000607665 437 ntBASIC1.44□□□□□ -2.18
SHOX2O60902 AC091965.4-201ENST00000607691 587 ntBASIC1.44□□□□□ -2.18
SHOX2O60902 AL627230.5-201ENST00000619807 58 ntBASIC1.44□□□□□ -2.18
SHOX2O60902 AC092192.1-201ENST00000633154 1018 ntBASIC1.44□□□□□ -2.18
SHOX2O60902 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC1.44□□□□□ -2.18
SHOX2O60902 AL589743.1-201ENST00000551932 2712 ntBASIC1.44□□□□□ -2.18
SHOX2O60902 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
SHOX2O60902 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
SHOX2O60902 RNU6-546P-201ENST00000383991 107 ntBASIC1.43□□□□□ -2.18
SHOX2O60902 SNORD14D-201ENST00000384390 87 ntBASIC1.43□□□□□ -2.18
SHOX2O60902 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
SHOX2O60902 RNU6-955P-201ENST00000410497 104 ntBASIC1.43□□□□□ -2.18
SHOX2O60902 RNU2-32P-201ENST00000411193 191 ntBASIC1.43□□□□□ -2.18
SHOX2O60902 SRIP3-201ENST00000413200 219 ntBASIC1.43□□□□□ -2.18
SHOX2O60902 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.43□□□□□ -2.18
SHOX2O60902 AC009310.1-201ENST00000414414 451 ntBASIC1.43□□□□□ -2.18
SHOX2O60902 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC1.43□□□□□ -2.18
SHOX2O60902 ZNF736P11Y-201ENST00000442535 1213 ntBASIC1.43□□□□□ -2.18
SHOX2O60902 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.43□□□□□ -2.18
SHOX2O60902 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.43□□□□□ -2.18
SHOX2O60902 SNORA25.15-201ENST00000516487 89 ntBASIC1.43□□□□□ -2.18
SHOX2O60902 RN7SKP256-201ENST00000517201 314 ntBASIC1.43□□□□□ -2.18
SHOX2O60902 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC1.43□□□□□ -2.18
SHOX2O60902 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.43□□□□□ -2.18
SHOX2O60902 AP004247.1-201ENST00000531556 1289 ntBASIC1.43□□□□□ -2.18
SHOX2O60902 AC098848.2-201ENST00000588023 330 ntBASIC1.43□□□□□ -2.18
SHOX2O60902 AC008133.2-201ENST00000624540 351 ntBASIC1.43□□□□□ -2.18
SHOX2O60902 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.43□□□□□ -2.18
SHOX2O60902 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.43□□□□□ -2.18
SHOX2O60902 SNORD115-3-201ENST00000363100 82 ntBASIC1.42□□□□□ -2.18
SHOX2O60902 RNA5SP457-201ENST00000363657 124 ntBASIC1.42□□□□□ -2.18
SHOX2O60902 SNORA4.3-201ENST00000365564 137 ntBASIC1.42□□□□□ -2.18
SHOX2O60902 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC1.42□□□□□ -2.18
SHOX2O60902 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC1.42□□□□□ -2.18
SHOX2O60902 FCF1P10-201ENST00000407590 479 ntBASIC1.42□□□□□ -2.18
SHOX2O60902 RNU2-48P-201ENST00000410694 191 ntBASIC1.42□□□□□ -2.18
SHOX2O60902 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.42□□□□□ -2.18
SHOX2O60902 PRELID3BP1-201ENST00000457142 540 ntBASIC1.42□□□□□ -2.18
SHOX2O60902 AL139824.2-201ENST00000458731 1095 ntBASIC1.42□□□□□ -2.18
SHOX2O60902 RNA5SP57-201ENST00000459463 123 ntBASIC1.42□□□□□ -2.18
SHOX2O60902 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.42□□□□□ -2.18
SHOX2O60902 AC104982.1-201ENST00000478775 574 ntBASIC1.42□□□□□ -2.18
SHOX2O60902 HMGB1P30-201ENST00000492455 606 ntBASIC1.42□□□□□ -2.18
SHOX2O60902 RNU6-1223P-201ENST00000517124 104 ntBASIC1.42□□□□□ -2.18
SHOX2O60902 CR383656.8-201ENST00000549046 145 ntBASIC1.42□□□□□ -2.18
SHOX2O60902 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.42□□□□□ -2.18
SHOX2O60902 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC1.42□□□□□ -2.18
SHOX2O60902 AC008269.2-201ENST00000561915 1105 ntBASIC1.42□□□□□ -2.18
SHOX2O60902 AL356432.3-201ENST00000568952 465 ntBASIC1.42□□□□□ -2.18
SHOX2O60902 AC006338.1-201ENST00000618453 749 ntBASIC1.42□□□□□ -2.18
SHOX2O60902 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.42□□□□□ -2.18
SHOX2O60902 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC1.42□□□□□ -2.18
SHOX2O60902 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
SHOX2O60902 FARSBP1-201ENST00000435808 1778 ntBASIC1.42□□□□□ -2.18
SHOX2O60902 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
SHOX2O60902 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
SHOX2O60902 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
SHOX2O60902 MIR126-201ENST00000362291 85 ntBASIC1.41□□□□□ -2.18
SHOX2O60902 RNU6-655P-201ENST00000362858 107 ntBASIC1.41□□□□□ -2.18
SHOX2O60902 RNU4-41P-201ENST00000364426 143 ntBASIC1.41□□□□□ -2.18
SHOX2O60902 SMIM11P1-201ENST00000369586 178 ntBASIC1.41□□□□□ -2.18
SHOX2O60902 RNU6-190P-201ENST00000384154 102 ntBASIC1.41□□□□□ -2.18
SHOX2O60902 SNORA70.7-201ENST00000384159 133 ntBASIC1.41□□□□□ -2.18
SHOX2O60902 RNU11-3P-201ENST00000391111 133 ntBASIC1.41□□□□□ -2.18
SHOX2O60902 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC1.41□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms