Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 AC002064.3-201ENST00000623448 346 ntBASIC3.26□□□□□ -1.89
PHGDHO43175 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
PHGDHO43175 AC012442.3-202ENST00000636742 206 ntBASIC3.26□□□□□ -1.89
PHGDHO43175 AC241585.2-209ENST00000638217 143 ntBASIC3.26□□□□□ -1.89
PHGDHO43175 AC099654.10-201ENST00000640395 161 ntBASIC3.26□□□□□ -1.89
PHGDHO43175 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.26□□□□□ -1.89
PHGDHO43175 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
PHGDHO43175 MTND5P1-201ENST00000445440 1375 ntBASIC3.25□□□□□ -1.89
PHGDHO43175 HAUS6P2-201ENST00000433254 2404 ntBASIC3.25□□□□□ -1.89
PHGDHO43175 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
PHGDHO43175 Y_RNA.431-201ENST00000384086 102 ntBASIC3.25□□□□□ -1.89
PHGDHO43175 MIR218-2-201ENST00000385006 110 ntBASIC3.25□□□□□ -1.89
PHGDHO43175 SNORA75.4-201ENST00000391278 119 ntBASIC3.25□□□□□ -1.89
PHGDHO43175 MTCYBP4-201ENST00000401524 249 ntBASIC3.25□□□□□ -1.89
PHGDHO43175 RNA5SP229-201ENST00000410809 99 ntBASIC3.25□□□□□ -1.89
PHGDHO43175 RPS20P15-201ENST00000412792 311 ntBASIC3.25□□□□□ -1.89
PHGDHO43175 AC236972.1-201ENST00000433225 199 ntBASIC3.25□□□□□ -1.89
PHGDHO43175 AC007677.1-201ENST00000445757 515 ntBASIC3.25□□□□□ -1.89
PHGDHO43175 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.25□□□□□ -1.89
PHGDHO43175 Y_RNA.653-201ENST00000459091 95 ntBASIC3.25□□□□□ -1.89
PHGDHO43175 SNORA84-201ENST00000459229 133 ntBASIC3.25□□□□□ -1.89
PHGDHO43175 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.25□□□□□ -1.89
PHGDHO43175 RPL21P129-201ENST00000491732 478 ntBASIC3.25□□□□□ -1.89
PHGDHO43175 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.25□□□□□ -1.89
PHGDHO43175 Y_RNA.670-201ENST00000516255 105 ntBASIC3.25□□□□□ -1.89
PHGDHO43175 RNU6-1213P-201ENST00000517075 94 ntBASIC3.25□□□□□ -1.89
PHGDHO43175 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.25□□□□□ -1.89
PHGDHO43175 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.25□□□□□ -1.89
PHGDHO43175 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.25□□□□□ -1.89
PHGDHO43175 AC109446.1-201ENST00000566172 220 ntBASIC3.25□□□□□ -1.89
PHGDHO43175 AC073476.4-201ENST00000628409 72 ntBASIC3.25□□□□□ -1.89
PHGDHO43175 AL669831.3-213ENST00000636676 183 ntBASIC3.25□□□□□ -1.89
PHGDHO43175 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
PHGDHO43175 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC3.24□□□□□ -1.89
PHGDHO43175 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
PHGDHO43175 RNU6-692P-201ENST00000384496 107 ntBASIC3.24□□□□□ -1.89
PHGDHO43175 AL133475.1-201ENST00000404414 305 ntBASIC3.24□□□□□ -1.89
PHGDHO43175 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.24□□□□□ -1.89
PHGDHO43175 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.24□□□□□ -1.89
PHGDHO43175 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.24□□□□□ -1.89
PHGDHO43175 AC243964.1-201ENST00000441814 261 ntBASIC3.24□□□□□ -1.89
PHGDHO43175 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.24□□□□□ -1.89
PHGDHO43175 OSTCP8-201ENST00000445117 448 ntBASIC3.24□□□□□ -1.89
PHGDHO43175 RPL30P15-201ENST00000457129 321 ntBASIC3.24□□□□□ -1.89
PHGDHO43175 RPL7P42-201ENST00000481005 679 ntBASIC3.24□□□□□ -1.89
PHGDHO43175 AC092185.1-201ENST00000491371 97 ntBASIC3.24□□□□□ -1.89
PHGDHO43175 MRPS36P2-201ENST00000512569 299 ntBASIC3.24□□□□□ -1.89
PHGDHO43175 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC3.24□□□□□ -1.89
PHGDHO43175 RNA5SP380-201ENST00000517190 98 ntBASIC3.24□□□□□ -1.89
PHGDHO43175 AC009812.2-201ENST00000517657 457 ntBASIC3.24□□□□□ -1.89
PHGDHO43175 AC026403.1-201ENST00000518938 295 ntBASIC3.24□□□□□ -1.89
PHGDHO43175 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC3.24□□□□□ -1.89
PHGDHO43175 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.24□□□□□ -1.89
PHGDHO43175 AC007458.1-201ENST00000542812 373 ntBASIC3.24□□□□□ -1.89
PHGDHO43175 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.24□□□□□ -1.89
PHGDHO43175 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.24□□□□□ -1.89
PHGDHO43175 MIR3158-1-201ENST00000583596 81 ntBASIC3.24□□□□□ -1.89
PHGDHO43175 AC011494.1-201ENST00000596454 237 ntBASIC3.24□□□□□ -1.89
PHGDHO43175 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.24□□□□□ -1.89
PHGDHO43175 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.24□□□□□ -1.89
PHGDHO43175 MIR8076-201ENST00000611401 83 ntBASIC3.24□□□□□ -1.89
PHGDHO43175 DLEU2_5.1-201ENST00000615567 84 ntBASIC3.24□□□□□ -1.89
PHGDHO43175 AC006133.1-201ENST00000617106 264 ntBASIC3.24□□□□□ -1.89
PHGDHO43175 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.24□□□□□ -1.89
PHGDHO43175 AC098657.3-201ENST00000620434 263 ntBASIC3.24□□□□□ -1.89
PHGDHO43175 AC091903.1-201ENST00000624322 454 ntBASIC3.24□□□□□ -1.89
PHGDHO43175 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.24□□□□□ -1.89
PHGDHO43175 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
PHGDHO43175 ZNF736P3Y-201ENST00000428264 1465 ntBASIC3.23□□□□□ -1.89
PHGDHO43175 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.23□□□□□ -1.89
PHGDHO43175 Y_RNA.2-201ENST00000362330 96 ntBASIC3.23□□□□□ -1.89
PHGDHO43175 RNU6-227P-201ENST00000362865 103 ntBASIC3.23□□□□□ -1.89
PHGDHO43175 U8.8-201ENST00000365399 135 ntBASIC3.23□□□□□ -1.89
PHGDHO43175 RNU6-487P-201ENST00000365430 104 ntBASIC3.23□□□□□ -1.89
PHGDHO43175 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
PHGDHO43175 SNORA48.7-201ENST00000391302 135 ntBASIC3.23□□□□□ -1.89
PHGDHO43175 RPS29P4-201ENST00000414733 161 ntBASIC3.23□□□□□ -1.89
PHGDHO43175 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.23□□□□□ -1.89
PHGDHO43175 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.23□□□□□ -1.89
PHGDHO43175 HMGN2P31-201ENST00000432430 273 ntBASIC3.23□□□□□ -1.89
PHGDHO43175 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.23□□□□□ -1.89
PHGDHO43175 AC004383.1-201ENST00000438135 289 ntBASIC3.23□□□□□ -1.89
PHGDHO43175 AC007969.2-201ENST00000441891 191 ntBASIC3.23□□□□□ -1.89
PHGDHO43175 AP001025.1-201ENST00000486139 332 ntBASIC3.23□□□□□ -1.89
PHGDHO43175 MTND4LP22-201ENST00000508209 276 ntBASIC3.23□□□□□ -1.89
PHGDHO43175 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.23□□□□□ -1.89
PHGDHO43175 RNU5B-3P-201ENST00000516601 115 ntBASIC3.23□□□□□ -1.89
PHGDHO43175 ANP32BP3-201ENST00000559213 706 ntBASIC3.23□□□□□ -1.89
PHGDHO43175 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.23□□□□□ -1.89
PHGDHO43175 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.23□□□□□ -1.89
PHGDHO43175 MIR1254-2-201ENST00000579553 63 ntBASIC3.23□□□□□ -1.89
PHGDHO43175 MIR4276-201ENST00000584832 70 ntBASIC3.23□□□□□ -1.89
PHGDHO43175 AC008739.3-201ENST00000603262 127 ntBASIC3.23□□□□□ -1.89
PHGDHO43175 AP001836.1-201ENST00000604675 523 ntBASIC3.23□□□□□ -1.89
PHGDHO43175 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.23□□□□□ -1.89
PHGDHO43175 AC133104.2-201ENST00000615272 193 ntBASIC3.23□□□□□ -1.89
PHGDHO43175 AL160413.1-201ENST00000622780 310 ntBASIC3.23□□□□□ -1.89
PHGDHO43175 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.23□□□□□ -1.89
PHGDHO43175 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.23□□□□□ -1.89
PHGDHO43175 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 133.1 ms