Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.03□□□□□ -2.08
MSH4O15457 AC093648.1-201ENST00000623546 606 ntBASIC2.03□□□□□ -2.08
MSH4O15457 MIR3529-201ENST00000637713 78 ntBASIC2.03□□□□□ -2.08
MSH4O15457 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
MSH4O15457 AC002543.1-201ENST00000299783 1954 ntBASIC2.02□□□□□ -2.09
MSH4O15457 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
MSH4O15457 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.02□□□□□ -2.09
MSH4O15457 RNU6-942P-201ENST00000363002 107 ntBASIC2.02□□□□□ -2.09
MSH4O15457 SNORD114-19-201ENST00000363072 75 ntBASIC2.02□□□□□ -2.09
MSH4O15457 RNA5SP99-201ENST00000364020 114 ntBASIC2.02□□□□□ -2.09
MSH4O15457 RNU4-52P-201ENST00000384209 138 ntBASIC2.02□□□□□ -2.09
MSH4O15457 RNU6-297P-201ENST00000384636 107 ntBASIC2.02□□□□□ -2.09
MSH4O15457 Y_RNA.576-201ENST00000384781 102 ntBASIC2.02□□□□□ -2.09
MSH4O15457 RN7SKP158-201ENST00000410453 326 ntBASIC2.02□□□□□ -2.09
MSH4O15457 RPL21P90-201ENST00000415692 466 ntBASIC2.02□□□□□ -2.09
MSH4O15457 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC2.02□□□□□ -2.09
MSH4O15457 AC092447.3-201ENST00000426027 686 ntBASIC2.02□□□□□ -2.09
MSH4O15457 RPL31P35-201ENST00000431058 377 ntBASIC2.02□□□□□ -2.09
MSH4O15457 AC016691.1-201ENST00000441321 413 ntBASIC2.02□□□□□ -2.09
MSH4O15457 CALM1P1-201ENST00000442082 433 ntBASIC2.02□□□□□ -2.09
MSH4O15457 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.02□□□□□ -2.09
MSH4O15457 MTCYBP1-201ENST00000454315 1119 ntBASIC2.02□□□□□ -2.09
MSH4O15457 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC2.02□□□□□ -2.09
MSH4O15457 AC098862.1-201ENST00000504991 413 ntBASIC2.02□□□□□ -2.09
MSH4O15457 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.02□□□□□ -2.09
MSH4O15457 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.02□□□□□ -2.09
MSH4O15457 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.02□□□□□ -2.09
MSH4O15457 RNU6-685P-201ENST00000517088 95 ntBASIC2.02□□□□□ -2.09
MSH4O15457 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.02□□□□□ -2.09
MSH4O15457 AC026407.1-201ENST00000518369 204 ntBASIC2.02□□□□□ -2.09
MSH4O15457 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC2.02□□□□□ -2.09
MSH4O15457 AC012414.6-201ENST00000568241 401 ntBASIC2.02□□□□□ -2.09
MSH4O15457 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.02□□□□□ -2.09
MSH4O15457 AC098848.2-201ENST00000588023 330 ntBASIC2.02□□□□□ -2.09
MSH4O15457 CLIC4P2-201ENST00000601934 717 ntBASIC2.02□□□□□ -2.09
MSH4O15457 AL355297.2-201ENST00000604792 129 ntBASIC2.02□□□□□ -2.09
MSH4O15457 MIR98-201ENST00000606724 119 ntBASIC2.02□□□□□ -2.09
MSH4O15457 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.02□□□□□ -2.09
MSH4O15457 U4atac.1-201ENST00000618345 95 ntBASIC2.02□□□□□ -2.09
MSH4O15457 AC084768.2-201ENST00000622736 221 ntBASIC2.02□□□□□ -2.09
MSH4O15457 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.01□□□□□ -2.09
MSH4O15457 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
MSH4O15457 RNU6-384P-201ENST00000364900 104 ntBASIC2.01□□□□□ -2.09
MSH4O15457 Y_RNA.367-201ENST00000365544 101 ntBASIC2.01□□□□□ -2.09
MSH4O15457 RNU6-843P-201ENST00000384454 104 ntBASIC2.01□□□□□ -2.09
MSH4O15457 AL049545.1-201ENST00000401856 572 ntBASIC2.01□□□□□ -2.09
MSH4O15457 SUMO2P12-201ENST00000405924 140 ntBASIC2.01□□□□□ -2.09
MSH4O15457 RNA5SP489-201ENST00000410986 109 ntBASIC2.01□□□□□ -2.09
MSH4O15457 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC2.01□□□□□ -2.09
MSH4O15457 C1DP2-201ENST00000418167 426 ntBASIC2.01□□□□□ -2.09
MSH4O15457 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC2.01□□□□□ -2.09
MSH4O15457 PGBD4P6-201ENST00000421501 610 ntBASIC2.01□□□□□ -2.09
MSH4O15457 MTCYBP5-201ENST00000423752 1135 ntBASIC2.01□□□□□ -2.09
MSH4O15457 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC2.01□□□□□ -2.09
MSH4O15457 MTCO3P5-201ENST00000433620 714 ntBASIC2.01□□□□□ -2.09
MSH4O15457 AC124916.1-201ENST00000444020 547 ntBASIC2.01□□□□□ -2.09
MSH4O15457 AC104058.1-201ENST00000448028 297 ntBASIC2.01□□□□□ -2.09
MSH4O15457 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.01□□□□□ -2.09
MSH4O15457 CYP2C59P-201ENST00000457790 269 ntBASIC2.01□□□□□ -2.09
MSH4O15457 RNA5SP269-201ENST00000459032 137 ntBASIC2.01□□□□□ -2.09
MSH4O15457 SNORD42A-201ENST00000459584 64 ntBASIC2.01□□□□□ -2.09
MSH4O15457 AC117503.1-201ENST00000472241 394 ntBASIC2.01□□□□□ -2.09
MSH4O15457 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.01□□□□□ -2.09
MSH4O15457 AC104806.1-201ENST00000508720 308 ntBASIC2.01□□□□□ -2.09
MSH4O15457 Y_RNA.687-201ENST00000516558 91 ntBASIC2.01□□□□□ -2.09
MSH4O15457 SNORA18.6-201ENST00000516792 115 ntBASIC2.01□□□□□ -2.09
MSH4O15457 OR5AL2P-201ENST00000532185 920 ntBASIC2.01□□□□□ -2.09
MSH4O15457 AP002453.2-201ENST00000533503 320 ntBASIC2.01□□□□□ -2.09
MSH4O15457 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC2.01□□□□□ -2.09
MSH4O15457 PSMA3P-201ENST00000555485 635 ntBASIC2.01□□□□□ -2.09
MSH4O15457 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC2.01□□□□□ -2.09
MSH4O15457 AC136619.2-201ENST00000563361 631 ntBASIC2.01□□□□□ -2.09
MSH4O15457 MIR5692A1-201ENST00000580523 69 ntBASIC2.01□□□□□ -2.09
MSH4O15457 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.01□□□□□ -2.09
MSH4O15457 SEPT7P9-203ENST00000604116 343 ntBASIC2.01□□□□□ -2.09
MSH4O15457 AC021646.1-201ENST00000605469 484 ntBASIC2.01□□□□□ -2.09
MSH4O15457 SCARNA4-202ENST00000625402 129 ntBASIC2.01□□□□□ -2.09
MSH4O15457 AC131280.1-202ENST00000624067 4211 ntBASIC2.01□□□□□ -2.09
MSH4O15457 KPNA2P1-201ENST00000458289 1591 ntBASIC2.01□□□□□ -2.09
MSH4O15457 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2□□□□□ -2.09
MSH4O15457 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2□□□□□ -2.09
MSH4O15457 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2□□□□□ -2.09
MSH4O15457 U3.4-201ENST00000363352 213 ntBASIC2□□□□□ -2.09
MSH4O15457 RNU6-371P-201ENST00000364283 108 ntBASIC2□□□□□ -2.09
MSH4O15457 RNU4-91P-201ENST00000364778 135 ntBASIC2□□□□□ -2.09
MSH4O15457 SNORD115-7-201ENST00000365306 82 ntBASIC2□□□□□ -2.09
MSH4O15457 RNA5SP240-201ENST00000365355 128 ntBASIC2□□□□□ -2.09
MSH4O15457 SNORA6-201ENST00000384033 151 ntBASIC2□□□□□ -2.09
MSH4O15457 RNU6-116P-201ENST00000384042 109 ntBASIC2□□□□□ -2.09
MSH4O15457 RNU1-148P-201ENST00000384472 162 ntBASIC2□□□□□ -2.09
MSH4O15457 AF228730.1-201ENST00000397972 663 ntBASIC2□□□□□ -2.09
MSH4O15457 UBE2V1P10-201ENST00000414685 269 ntBASIC2□□□□□ -2.09
MSH4O15457 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2□□□□□ -2.09
MSH4O15457 MTND3P17-201ENST00000416968 344 ntBASIC2□□□□□ -2.09
MSH4O15457 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2□□□□□ -2.09
MSH4O15457 CALM2P2-201ENST00000428512 440 ntBASIC2□□□□□ -2.09
MSH4O15457 AC000111.3-201ENST00000433478 193 ntBASIC2□□□□□ -2.09
MSH4O15457 GPR143P-201ENST00000434155 205 ntBASIC2□□□□□ -2.09
MSH4O15457 AC079781.2-201ENST00000446424 169 ntBASIC2□□□□□ -2.09
MSH4O15457 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms