Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.72□□□□□ -1.81
FOXN1O15353 MIR3128-201ENST00000581957 66 ntBASIC3.72□□□□□ -1.81
FOXN1O15353 AC004805.2-201ENST00000605382 482 ntBASIC3.72□□□□□ -1.81
FOXN1O15353 AL158032.1-201ENST00000605401 106 ntBASIC3.72□□□□□ -1.81
FOXN1O15353 AL161423.1-201ENST00000613700 262 ntBASIC3.72□□□□□ -1.81
FOXN1O15353 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.72□□□□□ -1.81
FOXN1O15353 U2.22-201ENST00000636441 106 ntBASIC3.72□□□□□ -1.81
FOXN1O15353 AL136964.1-201ENST00000622038 2990 ntBASIC3.72□□□□□ -1.81
FOXN1O15353 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.81
FOXN1O15353 AC010615.1-201ENST00000594254 1764 ntBASIC3.71□□□□□ -1.81
FOXN1O15353 AC017071.1-201ENST00000564407 2204 ntBASIC3.71□□□□□ -1.82
FOXN1O15353 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
FOXN1O15353 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.71□□□□□ -1.82
FOXN1O15353 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
FOXN1O15353 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
FOXN1O15353 Y_RNA.39-201ENST00000362620 98 ntBASIC3.71□□□□□ -1.82
FOXN1O15353 RNU6-1284P-201ENST00000363701 100 ntBASIC3.71□□□□□ -1.82
FOXN1O15353 Y_RNA.164-201ENST00000363709 102 ntBASIC3.71□□□□□ -1.82
FOXN1O15353 Y_RNA.350-201ENST00000365409 98 ntBASIC3.71□□□□□ -1.82
FOXN1O15353 RNU6-356P-201ENST00000384140 107 ntBASIC3.71□□□□□ -1.82
FOXN1O15353 Y_RNA.461-201ENST00000384263 103 ntBASIC3.71□□□□□ -1.82
FOXN1O15353 RNU6-842P-201ENST00000384269 107 ntBASIC3.71□□□□□ -1.82
FOXN1O15353 RNU6-434P-201ENST00000384376 107 ntBASIC3.71□□□□□ -1.82
FOXN1O15353 AL109755.1-201ENST00000401791 649 ntBASIC3.71□□□□□ -1.82
FOXN1O15353 MIR1252-201ENST00000408861 65 ntBASIC3.71□□□□□ -1.82
FOXN1O15353 RNA5SP111-201ENST00000411386 101 ntBASIC3.71□□□□□ -1.82
FOXN1O15353 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.71□□□□□ -1.82
FOXN1O15353 RPL21P24-201ENST00000413752 448 ntBASIC3.71□□□□□ -1.82
FOXN1O15353 PGBD4P6-201ENST00000421501 610 ntBASIC3.71□□□□□ -1.82
FOXN1O15353 RPL35AP22-201ENST00000436855 335 ntBASIC3.71□□□□□ -1.82
FOXN1O15353 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.71□□□□□ -1.82
FOXN1O15353 FABP5P13-201ENST00000452144 328 ntBASIC3.71□□□□□ -1.82
FOXN1O15353 AC006539.3-201ENST00000454258 129 ntBASIC3.71□□□□□ -1.82
FOXN1O15353 SNORD127-201ENST00000458892 86 ntBASIC3.71□□□□□ -1.82
FOXN1O15353 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.71□□□□□ -1.82
FOXN1O15353 AC026801.1-201ENST00000497178 464 ntBASIC3.71□□□□□ -1.82
FOXN1O15353 MTCO3P44-201ENST00000510977 541 ntBASIC3.71□□□□□ -1.82
FOXN1O15353 MTND1P19-201ENST00000511780 315 ntBASIC3.71□□□□□ -1.82
FOXN1O15353 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
FOXN1O15353 RNA5SP24-201ENST00000516478 95 ntBASIC3.71□□□□□ -1.82
FOXN1O15353 IGKV2D-36-201ENST00000518643 226 ntBASIC3.71□□□□□ -1.82
FOXN1O15353 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
FOXN1O15353 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.71□□□□□ -1.82
FOXN1O15353 DEFB122-202ENST00000569013 197 ntBASIC3.71□□□□□ -1.82
FOXN1O15353 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC3.71□□□□□ -1.82
FOXN1O15353 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
FOXN1O15353 AC141273.2-201ENST00000618989 130 ntBASIC3.71□□□□□ -1.82
FOXN1O15353 AC064859.1-201ENST00000624741 174 ntBASIC3.71□□□□□ -1.82
FOXN1O15353 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
FOXN1O15353 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
FOXN1O15353 SNORD56.3-201ENST00000363507 71 ntBASIC3.7□□□□□ -1.82
FOXN1O15353 RNVU1-3-201ENST00000364313 161 ntBASIC3.7□□□□□ -1.82
FOXN1O15353 RNU6-339P-201ENST00000384310 107 ntBASIC3.7□□□□□ -1.82
FOXN1O15353 SNORA41-201ENST00000384675 132 ntBASIC3.7□□□□□ -1.82
FOXN1O15353 RNU6-713P-201ENST00000384761 107 ntBASIC3.7□□□□□ -1.82
FOXN1O15353 RNU6-754P-201ENST00000391166 107 ntBASIC3.7□□□□□ -1.82
FOXN1O15353 MIR1250-201ENST00000408098 113 ntBASIC3.7□□□□□ -1.82
FOXN1O15353 RN7SKP220-201ENST00000410611 288 ntBASIC3.7□□□□□ -1.82
FOXN1O15353 RNA5SP229-201ENST00000410809 99 ntBASIC3.7□□□□□ -1.82
FOXN1O15353 UBE2FP1-201ENST00000416536 447 ntBASIC3.7□□□□□ -1.82
FOXN1O15353 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.7□□□□□ -1.82
FOXN1O15353 AC099799.1-201ENST00000439809 192 ntBASIC3.7□□□□□ -1.82
FOXN1O15353 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.7□□□□□ -1.82
FOXN1O15353 GAPDHP27-201ENST00000447427 1020 ntBASIC3.7□□□□□ -1.82
FOXN1O15353 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC3.7□□□□□ -1.82
FOXN1O15353 AC022447.4-201ENST00000504053 364 ntBASIC3.7□□□□□ -1.82
FOXN1O15353 AC096745.1-201ENST00000509945 370 ntBASIC3.7□□□□□ -1.82
FOXN1O15353 IL7-206ENST00000520269 456 ntTSL 3 BASIC3.7□□□□□ -1.82
FOXN1O15353 AC025423.5-201ENST00000550230 219 ntBASIC3.7□□□□□ -1.82
FOXN1O15353 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.7□□□□□ -1.82
FOXN1O15353 AC006254.3-201ENST00000603353 884 ntBASIC3.7□□□□□ -1.82
FOXN1O15353 AL355810.1-201ENST00000614629 552 ntBASIC3.7□□□□□ -1.82
FOXN1O15353 AC137590.2-201ENST00000619709 240 ntBASIC3.7□□□□□ -1.82
FOXN1O15353 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC3.7□□□□□ -1.82
FOXN1O15353 PWAR6-201ENST00000552334 4618 ntBASIC3.7□□□□□ -1.82
FOXN1O15353 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
FOXN1O15353 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.7□□□□□ -1.82
FOXN1O15353 ZNF72P-201ENST00000425869 1908 ntBASIC3.7□□□□□ -1.82
FOXN1O15353 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
FOXN1O15353 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
FOXN1O15353 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.69□□□□□ -1.82
FOXN1O15353 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
FOXN1O15353 Y_RNA.4-201ENST00000362333 112 ntBASIC3.69□□□□□ -1.82
FOXN1O15353 Y_RNA.60-201ENST00000362831 98 ntBASIC3.69□□□□□ -1.82
FOXN1O15353 SNORA23-201ENST00000365128 182 ntBASIC3.69□□□□□ -1.82
FOXN1O15353 SNORD14.1-201ENST00000365609 90 ntBASIC3.69□□□□□ -1.82
FOXN1O15353 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
FOXN1O15353 RNU6-637P-201ENST00000384050 107 ntBASIC3.69□□□□□ -1.82
FOXN1O15353 RNU6-701P-201ENST00000384059 107 ntBASIC3.69□□□□□ -1.82
FOXN1O15353 Y_RNA.483-201ENST00000384380 101 ntBASIC3.69□□□□□ -1.82
FOXN1O15353 AL139039.1-201ENST00000401900 692 ntBASIC3.69□□□□□ -1.82
FOXN1O15353 RPS4XP7-201ENST00000406274 780 ntBASIC3.69□□□□□ -1.82
FOXN1O15353 RNA5SP56-201ENST00000410277 118 ntBASIC3.69□□□□□ -1.82
FOXN1O15353 CHEK2P4-201ENST00000450340 246 ntBASIC3.69□□□□□ -1.82
FOXN1O15353 RPL9P32-201ENST00000464118 620 ntBASIC3.69□□□□□ -1.82
FOXN1O15353 RPL23AP14-201ENST00000468281 468 ntBASIC3.69□□□□□ -1.82
FOXN1O15353 RPS23P3-201ENST00000470993 430 ntBASIC3.69□□□□□ -1.82
FOXN1O15353 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.69□□□□□ -1.82
FOXN1O15353 AC105758.1-201ENST00000506038 399 ntBASIC3.69□□□□□ -1.82
FOXN1O15353 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms