Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
PDLIM1O00151 AP006437.1-201ENST00000641440 3685 ntBASIC2.16□□□□□ -2.06
PDLIM1O00151 RNU4-82P-201ENST00000362443 140 ntBASIC2.16□□□□□ -2.06
PDLIM1O00151 RNU6-715P-201ENST00000365204 103 ntBASIC2.16□□□□□ -2.06
PDLIM1O00151 XGY1-201ENST00000381172 446 ntBASIC2.16□□□□□ -2.06
PDLIM1O00151 Y_RNA.582-201ENST00000391023 95 ntBASIC2.16□□□□□ -2.06
PDLIM1O00151 SNORD23.1-201ENST00000408212 104 ntBASIC2.16□□□□□ -2.06
PDLIM1O00151 RNU4-46P-201ENST00000410818 138 ntBASIC2.16□□□□□ -2.06
PDLIM1O00151 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.16□□□□□ -2.06
PDLIM1O00151 AC138623.1-201ENST00000418060 216 ntBASIC2.16□□□□□ -2.06
PDLIM1O00151 AL353621.1-201ENST00000418219 243 ntBASIC2.16□□□□□ -2.06
PDLIM1O00151 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC2.16□□□□□ -2.06
PDLIM1O00151 AL451074.3-201ENST00000437709 472 ntBASIC2.16□□□□□ -2.06
PDLIM1O00151 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC2.16□□□□□ -2.06
PDLIM1O00151 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC2.16□□□□□ -2.06
PDLIM1O00151 RPL7P12-201ENST00000446719 750 ntBASIC2.16□□□□□ -2.06
PDLIM1O00151 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC2.16□□□□□ -2.06
PDLIM1O00151 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.16□□□□□ -2.06
PDLIM1O00151 TPT1P7-201ENST00000458300 517 ntBASIC2.16□□□□□ -2.06
PDLIM1O00151 MED28P2-201ENST00000475771 317 ntBASIC2.16□□□□□ -2.06
PDLIM1O00151 Y_RNA.687-201ENST00000516558 91 ntBASIC2.16□□□□□ -2.06
PDLIM1O00151 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.16□□□□□ -2.06
PDLIM1O00151 FAM92A1P1-201ENST00000528023 890 ntBASIC2.16□□□□□ -2.06
PDLIM1O00151 AL512310.1-201ENST00000548639 172 ntBASIC2.16□□□□□ -2.06
PDLIM1O00151 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.16□□□□□ -2.06
PDLIM1O00151 MIR4703-201ENST00000577728 79 ntBASIC2.16□□□□□ -2.06
PDLIM1O00151 AC073539.2-201ENST00000597113 165 ntBASIC2.16□□□□□ -2.06
PDLIM1O00151 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.16□□□□□ -2.06
PDLIM1O00151 AC136475.10-201ENST00000620253 385 ntBASIC2.16□□□□□ -2.06
PDLIM1O00151 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.16□□□□□ -2.06
PDLIM1O00151 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.16□□□□□ -2.06
PDLIM1O00151 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.16□□□□□ -2.06
PDLIM1O00151 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
PDLIM1O00151 MTND4P14-201ENST00000435799 1354 ntBASIC2.15□□□□□ -2.07
PDLIM1O00151 RNU6-1119P-201ENST00000384349 108 ntBASIC2.15□□□□□ -2.07
PDLIM1O00151 MIR17-201ENST00000385012 84 ntBASIC2.15□□□□□ -2.07
PDLIM1O00151 AL591416.1-201ENST00000404015 867 ntBASIC2.15□□□□□ -2.07
PDLIM1O00151 RAP1BP3-201ENST00000407180 549 ntBASIC2.15□□□□□ -2.07
PDLIM1O00151 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.15□□□□□ -2.07
PDLIM1O00151 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.15□□□□□ -2.07
PDLIM1O00151 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.15□□□□□ -2.07
PDLIM1O00151 RPS15AP28-201ENST00000435088 386 ntBASIC2.15□□□□□ -2.07
PDLIM1O00151 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.15□□□□□ -2.07
PDLIM1O00151 CALM1P1-201ENST00000442082 433 ntBASIC2.15□□□□□ -2.07
PDLIM1O00151 AC006026.2-201ENST00000457376 180 ntBASIC2.15□□□□□ -2.07
PDLIM1O00151 AC080013.2-201ENST00000460866 323 ntBASIC2.15□□□□□ -2.07
PDLIM1O00151 AC092436.1-201ENST00000506450 503 ntBASIC2.15□□□□□ -2.07
PDLIM1O00151 AC026436.1-201ENST00000510537 270 ntBASIC2.15□□□□□ -2.07
PDLIM1O00151 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.15□□□□□ -2.07
PDLIM1O00151 AC105417.1-201ENST00000514691 285 ntBASIC2.15□□□□□ -2.07
PDLIM1O00151 SMURF2P1-201ENST00000514992 481 ntBASIC2.15□□□□□ -2.07
PDLIM1O00151 RNA5SP24-201ENST00000516478 95 ntBASIC2.15□□□□□ -2.07
PDLIM1O00151 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.15□□□□□ -2.07
PDLIM1O00151 MIR4513-201ENST00000581077 86 ntBASIC2.15□□□□□ -2.07
PDLIM1O00151 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC2.15□□□□□ -2.07
PDLIM1O00151 AC103810.6-201ENST00000606708 136 ntBASIC2.15□□□□□ -2.07
PDLIM1O00151 RNU6-91P-201ENST00000607774 107 ntBASIC2.15□□□□□ -2.07
PDLIM1O00151 AC096772.1-201ENST00000609146 564 ntBASIC2.15□□□□□ -2.07
PDLIM1O00151 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.15□□□□□ -2.07
PDLIM1O00151 SCARNA4-202ENST00000625402 129 ntBASIC2.15□□□□□ -2.07
PDLIM1O00151 MIR3529-201ENST00000637713 78 ntBASIC2.15□□□□□ -2.07
PDLIM1O00151 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
PDLIM1O00151 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
PDLIM1O00151 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.07
PDLIM1O00151 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
PDLIM1O00151 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
PDLIM1O00151 RNU6-942P-201ENST00000363002 107 ntBASIC2.14□□□□□ -2.07
PDLIM1O00151 Y_RNA.159-201ENST00000363674 87 ntBASIC2.14□□□□□ -2.07
PDLIM1O00151 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
PDLIM1O00151 U6atac.2-201ENST00000408644 118 ntBASIC2.14□□□□□ -2.07
PDLIM1O00151 AL663109.1-201ENST00000411498 844 ntBASIC2.14□□□□□ -2.07
PDLIM1O00151 BTF3L4P1-201ENST00000413813 468 ntBASIC2.14□□□□□ -2.07
PDLIM1O00151 UBE2V1P10-201ENST00000414685 269 ntBASIC2.14□□□□□ -2.07
PDLIM1O00151 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.14□□□□□ -2.07
PDLIM1O00151 AL365400.1-201ENST00000431854 640 ntBASIC2.14□□□□□ -2.07
PDLIM1O00151 HMGB1P31-201ENST00000437242 427 ntBASIC2.14□□□□□ -2.07
PDLIM1O00151 MTND1P29-201ENST00000448112 647 ntBASIC2.14□□□□□ -2.07
PDLIM1O00151 AL118520.1-201ENST00000450770 291 ntBASIC2.14□□□□□ -2.07
PDLIM1O00151 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC2.14□□□□□ -2.07
PDLIM1O00151 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC2.14□□□□□ -2.07
PDLIM1O00151 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.14□□□□□ -2.07
PDLIM1O00151 MTCYBP33-201ENST00000575007 1130 ntBASIC2.14□□□□□ -2.07
PDLIM1O00151 AC105245.1-201ENST00000581934 244 ntBASIC2.14□□□□□ -2.07
PDLIM1O00151 AC008752.3-201ENST00000588113 712 ntBASIC2.14□□□□□ -2.07
PDLIM1O00151 AC008749.1-201ENST00000597650 306 ntBASIC2.14□□□□□ -2.07
PDLIM1O00151 BNIP3P30-201ENST00000601184 574 ntBASIC2.14□□□□□ -2.07
PDLIM1O00151 AC091805.2-201ENST00000603848 235 ntBASIC2.14□□□□□ -2.07
PDLIM1O00151 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.14□□□□□ -2.07
PDLIM1O00151 AC245008.1-201ENST00000608123 476 ntBASIC2.14□□□□□ -2.07
PDLIM1O00151 AC048344.4-201ENST00000619744 527 ntBASIC2.14□□□□□ -2.07
PDLIM1O00151 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.14□□□□□ -2.07
PDLIM1O00151 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.14□□□□□ -2.07
PDLIM1O00151 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
PDLIM1O00151 RBBP8P1-201ENST00000449447 1844 ntBASIC2.13□□□□□ -2.07
PDLIM1O00151 OR4G2P-201ENST00000328113 903 ntBASIC2.13□□□□□ -2.07
PDLIM1O00151 Y_RNA.1-201ENST00000352915 104 ntBASIC2.13□□□□□ -2.07
PDLIM1O00151 SNORD114-19-201ENST00000363072 75 ntBASIC2.13□□□□□ -2.07
PDLIM1O00151 RNU6-393P-201ENST00000384475 107 ntBASIC2.13□□□□□ -2.07
PDLIM1O00151 SNORD116-20-201ENST00000384529 92 ntBASIC2.13□□□□□ -2.07
PDLIM1O00151 RNU2-29P-201ENST00000410423 189 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 130 ms