Protein–RNA interactions for Protein: E9PL57

NEDD8-MDP1, NEDD8-MDP1 readthrough (Fragment), humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1E9PL57 SNORA16.2-201ENST00000390991 127 ntBASIC2.3□□□□□ -2.04
NEDD8-MDP1E9PL57 U3.37-201ENST00000408528 213 ntBASIC2.3□□□□□ -2.04
NEDD8-MDP1E9PL57 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.3□□□□□ -2.04
NEDD8-MDP1E9PL57 BX276092.3-201ENST00000424182 230 ntBASIC2.3□□□□□ -2.04
NEDD8-MDP1E9PL57 PTGES3P4-201ENST00000426243 356 ntBASIC2.3□□□□□ -2.04
NEDD8-MDP1E9PL57 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.3□□□□□ -2.04
NEDD8-MDP1E9PL57 RPS15AP7-201ENST00000439294 405 ntBASIC2.3□□□□□ -2.04
NEDD8-MDP1E9PL57 AC016691.1-201ENST00000441321 413 ntBASIC2.3□□□□□ -2.04
NEDD8-MDP1E9PL57 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC2.3□□□□□ -2.04
NEDD8-MDP1E9PL57 PSPHP1-201ENST00000450062 261 ntBASIC2.3□□□□□ -2.04
NEDD8-MDP1E9PL57 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.3□□□□□ -2.04
NEDD8-MDP1E9PL57 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.3□□□□□ -2.04
NEDD8-MDP1E9PL57 SCARNA18-201ENST00000459004 134 ntBASIC2.3□□□□□ -2.04
NEDD8-MDP1E9PL57 SRRM1P2-201ENST00000464531 1192 ntBASIC2.3□□□□□ -2.04
NEDD8-MDP1E9PL57 AC083798.1-201ENST00000472671 131 ntBASIC2.3□□□□□ -2.04
NEDD8-MDP1E9PL57 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.3□□□□□ -2.04
NEDD8-MDP1E9PL57 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC2.3□□□□□ -2.04
NEDD8-MDP1E9PL57 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2.3□□□□□ -2.04
NEDD8-MDP1E9PL57 AC009646.1-201ENST00000510455 318 ntBASIC2.3□□□□□ -2.04
NEDD8-MDP1E9PL57 RNU4ATAC8P-201ENST00000516196 109 ntBASIC2.3□□□□□ -2.04
NEDD8-MDP1E9PL57 ACA59.2-201ENST00000517061 156 ntBASIC2.3□□□□□ -2.04
NEDD8-MDP1E9PL57 OR5AQ1P-201ENST00000527596 927 ntBASIC2.3□□□□□ -2.04
NEDD8-MDP1E9PL57 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.3□□□□□ -2.04
NEDD8-MDP1E9PL57 HIF1AP1-201ENST00000553642 175 ntBASIC2.3□□□□□ -2.04
NEDD8-MDP1E9PL57 MTCO3P23-201ENST00000561363 289 ntBASIC2.3□□□□□ -2.04
NEDD8-MDP1E9PL57 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.3□□□□□ -2.04
NEDD8-MDP1E9PL57 OR1M4P-201ENST00000589199 287 ntBASIC2.3□□□□□ -2.04
NEDD8-MDP1E9PL57 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.3□□□□□ -2.04
NEDD8-MDP1E9PL57 AL359757.2-201ENST00000624309 274 ntBASIC2.3□□□□□ -2.04
NEDD8-MDP1E9PL57 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.3□□□□□ -2.04
NEDD8-MDP1E9PL57 AC099654.12-201ENST00000639868 649 ntBASIC2.3□□□□□ -2.04
NEDD8-MDP1E9PL57 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC2.3□□□□□ -2.04
NEDD8-MDP1E9PL57 AC004520.1-201ENST00000608362 1413 ntBASIC2.3□□□□□ -2.04
NEDD8-MDP1E9PL57 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
NEDD8-MDP1E9PL57 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.3□□□□□ -2.04
NEDD8-MDP1E9PL57 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
NEDD8-MDP1E9PL57 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
NEDD8-MDP1E9PL57 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.29□□□□□ -2.04
NEDD8-MDP1E9PL57 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.29□□□□□ -2.04
NEDD8-MDP1E9PL57 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.29□□□□□ -2.04
NEDD8-MDP1E9PL57 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.29□□□□□ -2.04
NEDD8-MDP1E9PL57 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.29□□□□□ -2.04
NEDD8-MDP1E9PL57 Y_RNA.3-201ENST00000362331 103 ntBASIC2.29□□□□□ -2.04
NEDD8-MDP1E9PL57 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
NEDD8-MDP1E9PL57 SET-203ENST00000372688 801 ntTSL 2 BASIC2.29□□□□□ -2.04
NEDD8-MDP1E9PL57 RNU6-19P-201ENST00000384718 107 ntBASIC2.29□□□□□ -2.04
NEDD8-MDP1E9PL57 SNORD70.1-201ENST00000391007 85 ntBASIC2.29□□□□□ -2.04
NEDD8-MDP1E9PL57 RNU6-780P-201ENST00000391030 104 ntBASIC2.29□□□□□ -2.04
NEDD8-MDP1E9PL57 FTH1P15-201ENST00000406984 280 ntBASIC2.29□□□□□ -2.04
NEDD8-MDP1E9PL57 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.29□□□□□ -2.04
NEDD8-MDP1E9PL57 RN7SKP32-201ENST00000410167 303 ntBASIC2.29□□□□□ -2.04
NEDD8-MDP1E9PL57 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.29□□□□□ -2.04
NEDD8-MDP1E9PL57 PGBD4P6-201ENST00000421501 610 ntBASIC2.29□□□□□ -2.04
NEDD8-MDP1E9PL57 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
NEDD8-MDP1E9PL57 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.29□□□□□ -2.04
NEDD8-MDP1E9PL57 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.29□□□□□ -2.04
NEDD8-MDP1E9PL57 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC2.29□□□□□ -2.04
NEDD8-MDP1E9PL57 AC011753.1-201ENST00000451001 220 ntBASIC2.29□□□□□ -2.04
NEDD8-MDP1E9PL57 snoU13.15-201ENST00000459407 104 ntBASIC2.29□□□□□ -2.04
NEDD8-MDP1E9PL57 AL121769.1-201ENST00000469473 401 ntBASIC2.29□□□□□ -2.04
NEDD8-MDP1E9PL57 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC2.29□□□□□ -2.04
NEDD8-MDP1E9PL57 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.29□□□□□ -2.04
NEDD8-MDP1E9PL57 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC2.29□□□□□ -2.04
NEDD8-MDP1E9PL57 GZMAP1-201ENST00000503054 631 ntBASIC2.29□□□□□ -2.04
NEDD8-MDP1E9PL57 AC074344.1-201ENST00000512823 224 ntBASIC2.29□□□□□ -2.04
NEDD8-MDP1E9PL57 LRRC34P2-201ENST00000514850 553 ntBASIC2.29□□□□□ -2.04
NEDD8-MDP1E9PL57 RNU2-69P-201ENST00000516061 100 ntBASIC2.29□□□□□ -2.04
NEDD8-MDP1E9PL57 MIR892C-201ENST00000516410 77 ntBASIC2.29□□□□□ -2.04
NEDD8-MDP1E9PL57 Y_RNA.693-201ENST00000516641 110 ntBASIC2.29□□□□□ -2.04
NEDD8-MDP1E9PL57 RNU6-835P-201ENST00000516974 104 ntBASIC2.29□□□□□ -2.04
NEDD8-MDP1E9PL57 IGLV3-17-201ENST00000519099 244 ntBASIC2.29□□□□□ -2.04
NEDD8-MDP1E9PL57 AL137161.1-201ENST00000532231 390 ntBASIC2.29□□□□□ -2.04
NEDD8-MDP1E9PL57 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.29□□□□□ -2.04
NEDD8-MDP1E9PL57 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.29□□□□□ -2.04
NEDD8-MDP1E9PL57 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC2.29□□□□□ -2.04
NEDD8-MDP1E9PL57 MIR5583-1-201ENST00000580941 59 ntBASIC2.29□□□□□ -2.04
NEDD8-MDP1E9PL57 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC2.29□□□□□ -2.04
NEDD8-MDP1E9PL57 MIR4424-201ENST00000585257 86 ntBASIC2.29□□□□□ -2.04
NEDD8-MDP1E9PL57 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.29□□□□□ -2.04
NEDD8-MDP1E9PL57 AF250324.2-201ENST00000608299 610 ntBASIC2.29□□□□□ -2.04
NEDD8-MDP1E9PL57 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.29□□□□□ -2.04
NEDD8-MDP1E9PL57 AC139792.2-201ENST00000624218 587 ntBASIC2.29□□□□□ -2.04
NEDD8-MDP1E9PL57 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
NEDD8-MDP1E9PL57 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.28□□□□□ -2.04
NEDD8-MDP1E9PL57 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
NEDD8-MDP1E9PL57 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
NEDD8-MDP1E9PL57 RNU6-1322P-201ENST00000364309 107 ntBASIC2.28□□□□□ -2.04
NEDD8-MDP1E9PL57 RNU6-1303P-201ENST00000364841 107 ntBASIC2.28□□□□□ -2.04
NEDD8-MDP1E9PL57 RNU6-393P-201ENST00000384475 107 ntBASIC2.28□□□□□ -2.04
NEDD8-MDP1E9PL57 SNORA11.4-201ENST00000408823 129 ntBASIC2.28□□□□□ -2.04
NEDD8-MDP1E9PL57 RNU4-26P-201ENST00000410270 107 ntBASIC2.28□□□□□ -2.04
NEDD8-MDP1E9PL57 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC2.28□□□□□ -2.04
NEDD8-MDP1E9PL57 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.28□□□□□ -2.04
NEDD8-MDP1E9PL57 TIMM9P3-201ENST00000428659 274 ntBASIC2.28□□□□□ -2.04
NEDD8-MDP1E9PL57 AC092427.1-202ENST00000430569 476 ntBASIC2.28□□□□□ -2.04
NEDD8-MDP1E9PL57 RPL7P54-201ENST00000438336 674 ntBASIC2.28□□□□□ -2.04
NEDD8-MDP1E9PL57 CALM1P1-201ENST00000442082 433 ntBASIC2.28□□□□□ -2.04
NEDD8-MDP1E9PL57 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.28□□□□□ -2.04
NEDD8-MDP1E9PL57 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC2.28□□□□□ -2.04
NEDD8-MDP1E9PL57 SNRPFP3-201ENST00000457792 225 ntBASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms