Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 IL7-206ENST00000520269 456 ntTSL 3 BASIC0.09□□□□□ -2.4
LINC01558Q9Y6Z2 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC0.09□□□□□ -2.4
LINC01558Q9Y6Z2 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC0.09□□□□□ -2.4
LINC01558Q9Y6Z2 AC023050.2-201ENST00000544968 387 ntBASIC0.09□□□□□ -2.4
LINC01558Q9Y6Z2 AC133485.1-201ENST00000567176 124 ntBASIC0.09□□□□□ -2.4
LINC01558Q9Y6Z2 AC138907.6-201ENST00000568401 126 ntBASIC0.09□□□□□ -2.4
LINC01558Q9Y6Z2 DPPA3P3-201ENST00000603842 430 ntBASIC0.09□□□□□ -2.4
LINC01558Q9Y6Z2 DLEU1_1.1-201ENST00000618107 190 ntBASIC0.09□□□□□ -2.4
LINC01558Q9Y6Z2 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC0.09□□□□□ -2.4
LINC01558Q9Y6Z2 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.08□□□□□ -2.4
LINC01558Q9Y6Z2 RNU6-349P-201ENST00000362402 107 ntBASIC0.08□□□□□ -2.4
LINC01558Q9Y6Z2 RNU6-223P-201ENST00000362830 107 ntBASIC0.08□□□□□ -2.4
LINC01558Q9Y6Z2 RNU4-51P-201ENST00000364206 140 ntBASIC0.08□□□□□ -2.4
LINC01558Q9Y6Z2 SNORA63D-201ENST00000364359 132 ntBASIC0.08□□□□□ -2.4
LINC01558Q9Y6Z2 RNU6-359P-201ENST00000365466 108 ntBASIC0.08□□□□□ -2.4
LINC01558Q9Y6Z2 Y_RNA.597-201ENST00000410463 100 ntBASIC0.08□□□□□ -2.4
LINC01558Q9Y6Z2 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC0.08□□□□□ -2.4
LINC01558Q9Y6Z2 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.08□□□□□ -2.4
LINC01558Q9Y6Z2 AL035398.1-201ENST00000430869 322 ntBASIC0.08□□□□□ -2.4
LINC01558Q9Y6Z2 ZNF965P-201ENST00000432501 817 ntBASIC0.08□□□□□ -2.4
LINC01558Q9Y6Z2 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC0.08□□□□□ -2.4
LINC01558Q9Y6Z2 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC0.08□□□□□ -2.4
LINC01558Q9Y6Z2 MTCO3P18-201ENST00000440206 761 ntBASIC0.08□□□□□ -2.4
LINC01558Q9Y6Z2 NEFMP1-201ENST00000443423 1006 ntBASIC0.08□□□□□ -2.4
LINC01558Q9Y6Z2 RPL7P36-201ENST00000444633 681 ntBASIC0.08□□□□□ -2.4
LINC01558Q9Y6Z2 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC0.08□□□□□ -2.4
LINC01558Q9Y6Z2 AC048334.1-201ENST00000477975 159 ntBASIC0.08□□□□□ -2.4
LINC01558Q9Y6Z2 AC104629.1-201ENST00000494226 508 ntBASIC0.08□□□□□ -2.4
LINC01558Q9Y6Z2 LAMTOR3P2-201ENST00000504479 232 ntBASIC0.08□□□□□ -2.4
LINC01558Q9Y6Z2 MTCO3P7-201ENST00000510008 774 ntBASIC0.08□□□□□ -2.4
LINC01558Q9Y6Z2 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC0.08□□□□□ -2.4
LINC01558Q9Y6Z2 AC079140.3-201ENST00000511111 550 ntBASIC0.08□□□□□ -2.4
LINC01558Q9Y6Z2 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC0.08□□□□□ -2.4
LINC01558Q9Y6Z2 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC0.08□□□□□ -2.4
LINC01558Q9Y6Z2 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC0.08□□□□□ -2.4
LINC01558Q9Y6Z2 APOOP3-201ENST00000536787 586 ntBASIC0.08□□□□□ -2.4
LINC01558Q9Y6Z2 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC0.08□□□□□ -2.4
LINC01558Q9Y6Z2 AC233266.2-201ENST00000567067 528 ntBASIC0.08□□□□□ -2.4
LINC01558Q9Y6Z2 AC078795.2-201ENST00000602835 1252 ntBASIC0.08□□□□□ -2.4
LINC01558Q9Y6Z2 AC022022.2-201ENST00000602989 360 ntBASIC0.08□□□□□ -2.4
LINC01558Q9Y6Z2 AP000654.2-201ENST00000605633 586 ntBASIC0.08□□□□□ -2.4
LINC01558Q9Y6Z2 RNU6-87P-201ENST00000607561 108 ntBASIC0.08□□□□□ -2.4
LINC01558Q9Y6Z2 AL451064.1-201ENST00000607718 471 ntBASIC0.08□□□□□ -2.4
LINC01558Q9Y6Z2 AC126177.8-201ENST00000618339 1015 ntBASIC0.08□□□□□ -2.4
LINC01558Q9Y6Z2 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC0.08□□□□□ -2.4
LINC01558Q9Y6Z2 AC018630.2-201ENST00000534866 2403 ntBASIC0.08□□□□□ -2.4
LINC01558Q9Y6Z2 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC0.07□□□□□ -2.4
LINC01558Q9Y6Z2 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC0.07□□□□□ -2.4
LINC01558Q9Y6Z2 RNU6-858P-201ENST00000362436 107 ntBASIC0.07□□□□□ -2.4
LINC01558Q9Y6Z2 Y_RNA.40-201ENST00000362645 93 ntBASIC0.07□□□□□ -2.4
LINC01558Q9Y6Z2 Y_RNA.332-201ENST00000365271 113 ntBASIC0.07□□□□□ -2.4
LINC01558Q9Y6Z2 RNU6-969P-201ENST00000383900 105 ntBASIC0.07□□□□□ -2.4
LINC01558Q9Y6Z2 RNA5SP111-201ENST00000411386 101 ntBASIC0.07□□□□□ -2.4
LINC01558Q9Y6Z2 TPMTP2-201ENST00000414372 726 ntBASIC0.07□□□□□ -2.4
LINC01558Q9Y6Z2 BX119904.4-201ENST00000424402 301 ntBASIC0.07□□□□□ -2.4
LINC01558Q9Y6Z2 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC0.07□□□□□ -2.4
LINC01558Q9Y6Z2 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC0.07□□□□□ -2.4
LINC01558Q9Y6Z2 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.07□□□□□ -2.4
LINC01558Q9Y6Z2 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC0.07□□□□□ -2.4
LINC01558Q9Y6Z2 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC0.07□□□□□ -2.4
LINC01558Q9Y6Z2 ATP5J2P3-201ENST00000451550 258 ntBASIC0.07□□□□□ -2.4
LINC01558Q9Y6Z2 OFD1P7Y-201ENST00000454643 1155 ntBASIC0.07□□□□□ -2.4
LINC01558Q9Y6Z2 AL353752.1-201ENST00000454946 260 ntBASIC0.07□□□□□ -2.4
LINC01558Q9Y6Z2 COX6CP14-201ENST00000469580 174 ntBASIC0.07□□□□□ -2.4
LINC01558Q9Y6Z2 AC068587.1-201ENST00000483613 781 ntBASIC0.07□□□□□ -2.4
LINC01558Q9Y6Z2 RPS29P21-201ENST00000496272 170 ntBASIC0.07□□□□□ -2.4
LINC01558Q9Y6Z2 AC005840.1-201ENST00000498412 377 ntBASIC0.07□□□□□ -2.4
LINC01558Q9Y6Z2 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC0.07□□□□□ -2.4
LINC01558Q9Y6Z2 AC091860.1-201ENST00000505723 432 ntBASIC0.07□□□□□ -2.4
LINC01558Q9Y6Z2 AC093809.1-201ENST00000509155 340 ntBASIC0.07□□□□□ -2.4
LINC01558Q9Y6Z2 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC0.07□□□□□ -2.4
LINC01558Q9Y6Z2 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC0.07□□□□□ -2.4
LINC01558Q9Y6Z2 RN7SKP12-201ENST00000516275 143 ntBASIC0.07□□□□□ -2.4
LINC01558Q9Y6Z2 RNU6-572P-201ENST00000516724 80 ntBASIC0.07□□□□□ -2.4
LINC01558Q9Y6Z2 RNU6-714P-201ENST00000516963 103 ntBASIC0.07□□□□□ -2.4
LINC01558Q9Y6Z2 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC0.07□□□□□ -2.4
LINC01558Q9Y6Z2 HSPE1P4-201ENST00000550617 308 ntBASIC0.07□□□□□ -2.4
LINC01558Q9Y6Z2 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC0.07□□□□□ -2.4
LINC01558Q9Y6Z2 CYP4A27P-201ENST00000567218 190 ntBASIC0.07□□□□□ -2.4
LINC01558Q9Y6Z2 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC0.07□□□□□ -2.4
LINC01558Q9Y6Z2 MIR4637-201ENST00000582405 84 ntBASIC0.07□□□□□ -2.4
LINC01558Q9Y6Z2 BNIP3P30-201ENST00000601184 574 ntBASIC0.07□□□□□ -2.4
LINC01558Q9Y6Z2 AP001981.2-201ENST00000603241 418 ntBASIC0.07□□□□□ -2.4
LINC01558Q9Y6Z2 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC0.07□□□□□ -2.4
LINC01558Q9Y6Z2 AC005858.4-201ENST00000623191 700 ntBASIC0.07□□□□□ -2.4
LINC01558Q9Y6Z2 snoU2_19.1-201ENST00000362361 80 ntBASIC0.06□□□□□ -2.4
LINC01558Q9Y6Z2 RNA5SP499-201ENST00000363982 119 ntBASIC0.06□□□□□ -2.4
LINC01558Q9Y6Z2 RNU6-1176P-201ENST00000390955 107 ntBASIC0.06□□□□□ -2.4
LINC01558Q9Y6Z2 RNU6-796P-201ENST00000391086 107 ntBASIC0.06□□□□□ -2.4
LINC01558Q9Y6Z2 RNA5SP299-201ENST00000391203 116 ntBASIC0.06□□□□□ -2.4
LINC01558Q9Y6Z2 RAP1BP3-201ENST00000407180 549 ntBASIC0.06□□□□□ -2.4
LINC01558Q9Y6Z2 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC0.06□□□□□ -2.4
LINC01558Q9Y6Z2 AC092628.1-201ENST00000436250 252 ntBASIC0.06□□□□□ -2.4
LINC01558Q9Y6Z2 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.06□□□□□ -2.4
LINC01558Q9Y6Z2 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.06□□□□□ -2.4
LINC01558Q9Y6Z2 AC012308.1-201ENST00000451232 178 ntBASIC0.06□□□□□ -2.4
LINC01558Q9Y6Z2 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC0.06□□□□□ -2.4
LINC01558Q9Y6Z2 FAM133DP-201ENST00000464802 691 ntBASIC0.06□□□□□ -2.4
LINC01558Q9Y6Z2 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC0.06□□□□□ -2.4
LINC01558Q9Y6Z2 SNORA68.3-201ENST00000515906 83 ntBASIC0.06□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms