Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC1.03□□□□□ -2.24
SCN10AQ9Y5Y9 AC009541.1-201ENST00000438279 2662 ntBASIC1.03□□□□□ -2.24
SCN10AQ9Y5Y9 RNU6-1284P-201ENST00000363701 100 ntBASIC1.03□□□□□ -2.25
SCN10AQ9Y5Y9 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC1.03□□□□□ -2.25
SCN10AQ9Y5Y9 MIR1305-201ENST00000408300 86 ntBASIC1.03□□□□□ -2.25
SCN10AQ9Y5Y9 AC138623.1-201ENST00000418060 216 ntBASIC1.03□□□□□ -2.25
SCN10AQ9Y5Y9 AC008267.5-201ENST00000424928 265 ntBASIC1.03□□□□□ -2.25
SCN10AQ9Y5Y9 RPS27P16-201ENST00000425758 201 ntBASIC1.03□□□□□ -2.25
SCN10AQ9Y5Y9 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC1.03□□□□□ -2.25
SCN10AQ9Y5Y9 AC092001.1-201ENST00000453012 261 ntBASIC1.03□□□□□ -2.25
SCN10AQ9Y5Y9 SNORD97-201ENST00000459187 142 ntBASIC1.03□□□□□ -2.25
SCN10AQ9Y5Y9 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC1.03□□□□□ -2.25
SCN10AQ9Y5Y9 COPS8P3-201ENST00000526024 482 ntBASIC1.03□□□□□ -2.25
SCN10AQ9Y5Y9 OR5B19P-201ENST00000531766 928 ntBASIC1.03□□□□□ -2.25
SCN10AQ9Y5Y9 AF038458.1-201ENST00000588406 262 ntBASIC1.03□□□□□ -2.25
SCN10AQ9Y5Y9 AP001542.1-201ENST00000591314 200 ntBASIC1.03□□□□□ -2.25
SCN10AQ9Y5Y9 AL161798.1-201ENST00000604630 131 ntBASIC1.03□□□□□ -2.25
SCN10AQ9Y5Y9 AC211469.2-201ENST00000605461 205 ntBASIC1.03□□□□□ -2.25
SCN10AQ9Y5Y9 NDUFA8P1-201ENST00000605525 367 ntBASIC1.03□□□□□ -2.25
SCN10AQ9Y5Y9 AC090970.3-201ENST00000612566 866 ntBASIC1.03□□□□□ -2.25
SCN10AQ9Y5Y9 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.03□□□□□ -2.25
SCN10AQ9Y5Y9 PCMTD1P7-201ENST00000634506 357 ntBASIC1.03□□□□□ -2.25
SCN10AQ9Y5Y9 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.03□□□□□ -2.25
SCN10AQ9Y5Y9 RNU6-1105P-201ENST00000384774 107 ntBASIC1.02□□□□□ -2.25
SCN10AQ9Y5Y9 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
SCN10AQ9Y5Y9 ZNF736P7Y-201ENST00000425158 820 ntBASIC1.02□□□□□ -2.25
SCN10AQ9Y5Y9 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.02□□□□□ -2.25
SCN10AQ9Y5Y9 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC1.02□□□□□ -2.25
SCN10AQ9Y5Y9 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC1.02□□□□□ -2.25
SCN10AQ9Y5Y9 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC1.02□□□□□ -2.25
SCN10AQ9Y5Y9 RNU6-583P-201ENST00000516012 92 ntBASIC1.02□□□□□ -2.25
SCN10AQ9Y5Y9 MTATP6P25-201ENST00000574491 261 ntBASIC1.02□□□□□ -2.25
SCN10AQ9Y5Y9 AC136618.2-201ENST00000575091 400 ntBASIC1.02□□□□□ -2.25
SCN10AQ9Y5Y9 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC1.02□□□□□ -2.25
SCN10AQ9Y5Y9 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC1.02□□□□□ -2.25
SCN10AQ9Y5Y9 AC018630.2-201ENST00000534866 2403 ntBASIC1.02□□□□□ -2.25
SCN10AQ9Y5Y9 AC068700.1-201ENST00000565862 3754 ntBASIC1.02□□□□□ -2.25
SCN10AQ9Y5Y9 RBBP8P1-201ENST00000449447 1844 ntBASIC1.01□□□□□ -2.25
SCN10AQ9Y5Y9 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.01□□□□□ -2.25
SCN10AQ9Y5Y9 CBX3P1-201ENST00000325243 554 ntBASIC1.01□□□□□ -2.25
SCN10AQ9Y5Y9 SNORA25.8-201ENST00000364831 128 ntBASIC1.01□□□□□ -2.25
SCN10AQ9Y5Y9 RNU6-716P-201ENST00000365621 103 ntBASIC1.01□□□□□ -2.25
SCN10AQ9Y5Y9 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC1.01□□□□□ -2.25
SCN10AQ9Y5Y9 AC114801.2-201ENST00000503825 781 ntBASIC1.01□□□□□ -2.25
SCN10AQ9Y5Y9 LAMTOR3P2-201ENST00000504479 232 ntBASIC1.01□□□□□ -2.25
SCN10AQ9Y5Y9 AC021146.8-201ENST00000507455 733 ntBASIC1.01□□□□□ -2.25
SCN10AQ9Y5Y9 AC116655.1-201ENST00000508324 901 ntBASIC1.01□□□□□ -2.25
SCN10AQ9Y5Y9 AC009902.1-201ENST00000519351 183 ntBASIC1.01□□□□□ -2.25
SCN10AQ9Y5Y9 AC104417.1-201ENST00000523974 751 ntBASIC1.01□□□□□ -2.25
SCN10AQ9Y5Y9 DEFB108E-201ENST00000524692 240 ntBASIC1.01□□□□□ -2.25
SCN10AQ9Y5Y9 AL133153.1-201ENST00000557756 303 ntBASIC1.01□□□□□ -2.25
SCN10AQ9Y5Y9 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.01□□□□□ -2.25
SCN10AQ9Y5Y9 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.01□□□□□ -2.25
SCN10AQ9Y5Y9 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.01□□□□□ -2.25
SCN10AQ9Y5Y9 RPL30P11-203ENST00000598995 310 ntBASIC1.01□□□□□ -2.25
SCN10AQ9Y5Y9 AC123767.1-202ENST00000620407 817 ntBASIC1.01□□□□□ -2.25
SCN10AQ9Y5Y9 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
SCN10AQ9Y5Y9 SNORD114-23-201ENST00000363536 72 ntBASIC1.01□□□□□ -2.25
SCN10AQ9Y5Y9 SNORD14B-201ENST00000364533 90 ntBASIC1.01□□□□□ -2.25
SCN10AQ9Y5Y9 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.01□□□□□ -2.25
SCN10AQ9Y5Y9 AC119751.3-201ENST00000399720 670 ntBASIC1.01□□□□□ -2.25
SCN10AQ9Y5Y9 AC004941.2-201ENST00000427009 228 ntBASIC1.01□□□□□ -2.25
SCN10AQ9Y5Y9 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC1.01□□□□□ -2.25
SCN10AQ9Y5Y9 HMGN1P33-201ENST00000432945 451 ntBASIC1.01□□□□□ -2.25
SCN10AQ9Y5Y9 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.01□□□□□ -2.25
SCN10AQ9Y5Y9 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC1.01□□□□□ -2.25
SCN10AQ9Y5Y9 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC1.01□□□□□ -2.25
SCN10AQ9Y5Y9 FAM71BP1-201ENST00000604431 523 ntBASIC1.01□□□□□ -2.25
SCN10AQ9Y5Y9 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.01□□□□□ -2.25
SCN10AQ9Y5Y9 AC121333.1-201ENST00000567488 2709 ntBASIC1.01□□□□□ -2.25
SCN10AQ9Y5Y9 MIR424-201ENST00000362227 98 ntBASIC1□□□□□ -2.25
SCN10AQ9Y5Y9 RNU6-942P-201ENST00000363002 107 ntBASIC1□□□□□ -2.25
SCN10AQ9Y5Y9 RNU6-188P-201ENST00000364207 107 ntBASIC1□□□□□ -2.25
SCN10AQ9Y5Y9 SNORD1A-201ENST00000364968 72 ntBASIC1□□□□□ -2.25
SCN10AQ9Y5Y9 OR6C66P-201ENST00000414917 930 ntBASIC1□□□□□ -2.25
SCN10AQ9Y5Y9 EBAG9P1-201ENST00000418955 543 ntBASIC1□□□□□ -2.25
SCN10AQ9Y5Y9 AC092648.1-201ENST00000425870 423 ntBASIC1□□□□□ -2.25
SCN10AQ9Y5Y9 AC010153.1-201ENST00000432862 727 ntBASIC1□□□□□ -2.25
SCN10AQ9Y5Y9 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC1□□□□□ -2.25
SCN10AQ9Y5Y9 RNU6-390P-201ENST00000516259 103 ntBASIC1□□□□□ -2.25
SCN10AQ9Y5Y9 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC1□□□□□ -2.25
SCN10AQ9Y5Y9 BNIP3P9-201ENST00000603714 553 ntBASIC1□□□□□ -2.25
SCN10AQ9Y5Y9 AL050343.2-201ENST00000607338 280 ntBASIC1□□□□□ -2.25
SCN10AQ9Y5Y9 Y_RNA.251-201ENST00000364551 99 ntBASIC0.99□□□□□ -2.25
SCN10AQ9Y5Y9 RNU6-622P-201ENST00000384272 103 ntBASIC0.99□□□□□ -2.25
SCN10AQ9Y5Y9 RNU6-360P-201ENST00000390944 104 ntBASIC0.99□□□□□ -2.25
SCN10AQ9Y5Y9 RNU2-23P-201ENST00000410545 195 ntBASIC0.99□□□□□ -2.25
SCN10AQ9Y5Y9 RNA5SP501-201ENST00000410990 112 ntBASIC0.99□□□□□ -2.25
SCN10AQ9Y5Y9 RPL21P90-201ENST00000415692 466 ntBASIC0.99□□□□□ -2.25
SCN10AQ9Y5Y9 CST2P1-201ENST00000425770 87 ntBASIC0.99□□□□□ -2.25
SCN10AQ9Y5Y9 RPL17P35-201ENST00000432217 549 ntBASIC0.99□□□□□ -2.25
SCN10AQ9Y5Y9 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC0.99□□□□□ -2.25
SCN10AQ9Y5Y9 HESX1-202ENST00000473921 757 ntTSL 5 BASIC0.99□□□□□ -2.25
SCN10AQ9Y5Y9 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC0.99□□□□□ -2.25
SCN10AQ9Y5Y9 RNU6-143P-201ENST00000516942 93 ntBASIC0.99□□□□□ -2.25
SCN10AQ9Y5Y9 SNORA31.17-201ENST00000516953 127 ntBASIC0.99□□□□□ -2.25
SCN10AQ9Y5Y9 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC0.99□□□□□ -2.25
SCN10AQ9Y5Y9 MIR4698-201ENST00000577795 80 ntBASIC0.99□□□□□ -2.25
SCN10AQ9Y5Y9 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC0.99□□□□□ -2.25
SCN10AQ9Y5Y9 VN1R83P-201ENST00000595685 445 ntBASIC0.99□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 197.8 ms