Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 TOMM20P4-201ENST00000427861 435 ntBASIC1.5□□□□□ -2.17
RHBDD3Q9Y3P4 RPL7P54-201ENST00000438336 674 ntBASIC1.5□□□□□ -2.17
RHBDD3Q9Y3P4 AL035666.1-201ENST00000446195 348 ntBASIC1.5□□□□□ -2.17
RHBDD3Q9Y3P4 USP9YP25-201ENST00000457708 443 ntBASIC1.5□□□□□ -2.17
RHBDD3Q9Y3P4 MTCO2P29-201ENST00000465212 189 ntBASIC1.5□□□□□ -2.17
RHBDD3Q9Y3P4 RPL30P1-201ENST00000488676 339 ntBASIC1.5□□□□□ -2.17
RHBDD3Q9Y3P4 RPL23AP63-201ENST00000498752 471 ntBASIC1.5□□□□□ -2.17
RHBDD3Q9Y3P4 RNU6-970P-201ENST00000516312 107 ntBASIC1.5□□□□□ -2.17
RHBDD3Q9Y3P4 SNORA43.2-201ENST00000516652 128 ntBASIC1.5□□□□□ -2.17
RHBDD3Q9Y3P4 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC1.5□□□□□ -2.17
RHBDD3Q9Y3P4 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC1.5□□□□□ -2.17
RHBDD3Q9Y3P4 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.5□□□□□ -2.17
RHBDD3Q9Y3P4 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.5□□□□□ -2.17
RHBDD3Q9Y3P4 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC1.5□□□□□ -2.17
RHBDD3Q9Y3P4 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC1.5□□□□□ -2.17
RHBDD3Q9Y3P4 AC104581.2-201ENST00000572227 430 ntBASIC1.5□□□□□ -2.17
RHBDD3Q9Y3P4 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.5□□□□□ -2.17
RHBDD3Q9Y3P4 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.5□□□□□ -2.17
RHBDD3Q9Y3P4 AL159153.1-201ENST00000619688 317 ntBASIC1.5□□□□□ -2.17
RHBDD3Q9Y3P4 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC1.5□□□□□ -2.17
RHBDD3Q9Y3P4 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.49□□□□□ -2.17
RHBDD3Q9Y3P4 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.49□□□□□ -2.17
RHBDD3Q9Y3P4 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
RHBDD3Q9Y3P4 RNU6-338P-201ENST00000383888 105 ntBASIC1.49□□□□□ -2.17
RHBDD3Q9Y3P4 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
RHBDD3Q9Y3P4 SNORD115.1-201ENST00000391109 76 ntBASIC1.49□□□□□ -2.17
RHBDD3Q9Y3P4 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC1.49□□□□□ -2.17
RHBDD3Q9Y3P4 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC1.49□□□□□ -2.17
RHBDD3Q9Y3P4 IFNA20P-201ENST00000436840 528 ntBASIC1.49□□□□□ -2.17
RHBDD3Q9Y3P4 MTND5P2-201ENST00000442927 1142 ntBASIC1.49□□□□□ -2.17
RHBDD3Q9Y3P4 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC1.49□□□□□ -2.17
RHBDD3Q9Y3P4 HMGN2P23-201ENST00000456759 269 ntBASIC1.49□□□□□ -2.17
RHBDD3Q9Y3P4 RNU6-333P-201ENST00000459117 107 ntBASIC1.49□□□□□ -2.17
RHBDD3Q9Y3P4 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC1.49□□□□□ -2.17
RHBDD3Q9Y3P4 AC112206.4-201ENST00000515142 405 ntBASIC1.49□□□□□ -2.17
RHBDD3Q9Y3P4 Y_RNA.687-201ENST00000516558 91 ntBASIC1.49□□□□□ -2.17
RHBDD3Q9Y3P4 MIR3118-1-201ENST00000581787 76 ntBASIC1.49□□□□□ -2.17
RHBDD3Q9Y3P4 AC010928.2-201ENST00000588017 287 ntBASIC1.49□□□□□ -2.17
RHBDD3Q9Y3P4 AL136363.2-201ENST00000604173 851 ntBASIC1.49□□□□□ -2.17
RHBDD3Q9Y3P4 AC016925.2-201ENST00000605108 242 ntBASIC1.49□□□□□ -2.17
RHBDD3Q9Y3P4 AC013244.3-201ENST00000605614 388 ntBASIC1.49□□□□□ -2.17
RHBDD3Q9Y3P4 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.49□□□□□ -2.17
RHBDD3Q9Y3P4 AL139286.2-201ENST00000606838 396 ntBASIC1.49□□□□□ -2.17
RHBDD3Q9Y3P4 AC084768.2-201ENST00000622736 221 ntBASIC1.49□□□□□ -2.17
RHBDD3Q9Y3P4 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
RHBDD3Q9Y3P4 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.49□□□□□ -2.17
RHBDD3Q9Y3P4 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
RHBDD3Q9Y3P4 RNU6-160P-201ENST00000384591 107 ntBASIC1.48□□□□□ -2.17
RHBDD3Q9Y3P4 U8.13-201ENST00000390842 128 ntBASIC1.48□□□□□ -2.17
RHBDD3Q9Y3P4 AL355143.1-201ENST00000407101 841 ntBASIC1.48□□□□□ -2.17
RHBDD3Q9Y3P4 RPS15AP12-201ENST00000419498 388 ntBASIC1.48□□□□□ -2.17
RHBDD3Q9Y3P4 AL358453.1-201ENST00000422522 250 ntBASIC1.48□□□□□ -2.17
RHBDD3Q9Y3P4 RPS15AP10-201ENST00000432472 382 ntBASIC1.48□□□□□ -2.17
RHBDD3Q9Y3P4 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.48□□□□□ -2.17
RHBDD3Q9Y3P4 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.48□□□□□ -2.17
RHBDD3Q9Y3P4 RPL30P6-201ENST00000475925 342 ntBASIC1.48□□□□□ -2.17
RHBDD3Q9Y3P4 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
RHBDD3Q9Y3P4 AC112204.1-201ENST00000502591 103 ntBASIC1.48□□□□□ -2.17
RHBDD3Q9Y3P4 MTND2P33-201ENST00000506452 1031 ntBASIC1.48□□□□□ -2.17
RHBDD3Q9Y3P4 AC093259.1-201ENST00000509755 300 ntBASIC1.48□□□□□ -2.17
RHBDD3Q9Y3P4 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.48□□□□□ -2.17
RHBDD3Q9Y3P4 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.48□□□□□ -2.17
RHBDD3Q9Y3P4 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.48□□□□□ -2.17
RHBDD3Q9Y3P4 AC022022.2-201ENST00000602989 360 ntBASIC1.48□□□□□ -2.17
RHBDD3Q9Y3P4 AC105148.1-201ENST00000604961 409 ntBASIC1.48□□□□□ -2.17
RHBDD3Q9Y3P4 AC012409.4-201ENST00000612923 249 ntBASIC1.48□□□□□ -2.17
RHBDD3Q9Y3P4 AP000720.1-201ENST00000625091 483 ntBASIC1.48□□□□□ -2.17
RHBDD3Q9Y3P4 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
RHBDD3Q9Y3P4 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.48□□□□□ -2.17
RHBDD3Q9Y3P4 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.47□□□□□ -2.17
RHBDD3Q9Y3P4 Y_RNA.97-201ENST00000363094 102 ntBASIC1.47□□□□□ -2.17
RHBDD3Q9Y3P4 SNORD56.2-201ENST00000363242 71 ntBASIC1.47□□□□□ -2.17
RHBDD3Q9Y3P4 SNORA62.1-201ENST00000364287 154 ntBASIC1.47□□□□□ -2.17
RHBDD3Q9Y3P4 RNA5SP363-201ENST00000365072 115 ntBASIC1.47□□□□□ -2.17
RHBDD3Q9Y3P4 RNU6-906P-201ENST00000384700 70 ntBASIC1.47□□□□□ -2.17
RHBDD3Q9Y3P4 MIR122-201ENST00000385044 85 ntBASIC1.47□□□□□ -2.17
RHBDD3Q9Y3P4 RNU6-1242P-201ENST00000391052 103 ntBASIC1.47□□□□□ -2.17
RHBDD3Q9Y3P4 NCOR1P3-201ENST00000420479 303 ntBASIC1.47□□□□□ -2.17
RHBDD3Q9Y3P4 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.47□□□□□ -2.17
RHBDD3Q9Y3P4 AL354941.1-201ENST00000438600 464 ntBASIC1.47□□□□□ -2.17
RHBDD3Q9Y3P4 AL353752.1-201ENST00000454946 260 ntBASIC1.47□□□□□ -2.17
RHBDD3Q9Y3P4 AC104564.1-201ENST00000493028 407 ntBASIC1.47□□□□□ -2.17
RHBDD3Q9Y3P4 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.47□□□□□ -2.17
RHBDD3Q9Y3P4 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.47□□□□□ -2.17
RHBDD3Q9Y3P4 AC116347.2-201ENST00000514912 523 ntBASIC1.47□□□□□ -2.17
RHBDD3Q9Y3P4 RNU6-965P-201ENST00000516721 96 ntBASIC1.47□□□□□ -2.17
RHBDD3Q9Y3P4 AP000889.1-201ENST00000530968 660 ntBASIC1.47□□□□□ -2.17
RHBDD3Q9Y3P4 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.47□□□□□ -2.17
RHBDD3Q9Y3P4 AK6P1-201ENST00000540219 478 ntBASIC1.47□□□□□ -2.17
RHBDD3Q9Y3P4 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.47□□□□□ -2.17
RHBDD3Q9Y3P4 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.47□□□□□ -2.17
RHBDD3Q9Y3P4 AC091135.1-201ENST00000585943 307 ntBASIC1.47□□□□□ -2.17
RHBDD3Q9Y3P4 AL359999.1-201ENST00000604513 294 ntBASIC1.47□□□□□ -2.17
RHBDD3Q9Y3P4 AP000654.2-201ENST00000605633 586 ntBASIC1.47□□□□□ -2.17
RHBDD3Q9Y3P4 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.47□□□□□ -2.17
RHBDD3Q9Y3P4 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.47□□□□□ -2.17
RHBDD3Q9Y3P4 AC008993.2-201ENST00000631744 806 ntBASIC1.47□□□□□ -2.17
RHBDD3Q9Y3P4 AL445984.1-201ENST00000637834 659 ntBASIC1.47□□□□□ -2.17
RHBDD3Q9Y3P4 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC1.47□□□□□ -2.17
RHBDD3Q9Y3P4 MTND4P9-201ENST00000507819 1346 ntBASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms