Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC4.44□□□□□ -1.7
CDK11AQ9UQ88 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
CDK11AQ9UQ88 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CDK11AQ9UQ88 MIR412-201ENST00000362142 91 ntBASIC4.43□□□□□ -1.7
CDK11AQ9UQ88 SNORD56.5-201ENST00000364281 72 ntBASIC4.43□□□□□ -1.7
CDK11AQ9UQ88 Y_RNA.414-201ENST00000384011 101 ntBASIC4.43□□□□□ -1.7
CDK11AQ9UQ88 RNU6-1179P-201ENST00000384667 107 ntBASIC4.43□□□□□ -1.7
CDK11AQ9UQ88 MIR196B-201ENST00000384852 84 ntBASIC4.43□□□□□ -1.7
CDK11AQ9UQ88 MT-TD-201ENST00000387419 68 ntBASIC4.43□□□□□ -1.7
CDK11AQ9UQ88 RNU2-52P-201ENST00000410680 190 ntBASIC4.43□□□□□ -1.7
CDK11AQ9UQ88 RNU2-41P-201ENST00000410991 178 ntBASIC4.43□□□□□ -1.7
CDK11AQ9UQ88 NCOR1P3-201ENST00000420479 303 ntBASIC4.43□□□□□ -1.7
CDK11AQ9UQ88 HMGB1P9-201ENST00000429856 646 ntBASIC4.43□□□□□ -1.7
CDK11AQ9UQ88 AC009969.1-201ENST00000438726 172 ntBASIC4.43□□□□□ -1.7
CDK11AQ9UQ88 AL360271.2-201ENST00000447710 161 ntBASIC4.43□□□□□ -1.7
CDK11AQ9UQ88 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC4.43□□□□□ -1.7
CDK11AQ9UQ88 AC113155.1-201ENST00000511141 769 ntBASIC4.43□□□□□ -1.7
CDK11AQ9UQ88 AC008549.1-201ENST00000512900 643 ntBASIC4.43□□□□□ -1.7
CDK11AQ9UQ88 SNORA19.2-201ENST00000516013 114 ntBASIC4.43□□□□□ -1.7
CDK11AQ9UQ88 RNU4-49P-201ENST00000516080 140 ntBASIC4.43□□□□□ -1.7
CDK11AQ9UQ88 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC4.43□□□□□ -1.7
CDK11AQ9UQ88 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC4.43□□□□□ -1.7
CDK11AQ9UQ88 FGF7P1-201ENST00000582820 288 ntBASIC4.43□□□□□ -1.7
CDK11AQ9UQ88 AC091135.1-201ENST00000585943 307 ntBASIC4.43□□□□□ -1.7
CDK11AQ9UQ88 MTND4LP5-201ENST00000605152 292 ntBASIC4.43□□□□□ -1.7
CDK11AQ9UQ88 uc_338.5-201ENST00000611839 155 ntBASIC4.43□□□□□ -1.7
CDK11AQ9UQ88 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
CDK11AQ9UQ88 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
CDK11AQ9UQ88 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
CDK11AQ9UQ88 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC4.43□□□□□ -1.7
CDK11AQ9UQ88 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC4.42□□□□□ -1.7
CDK11AQ9UQ88 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC4.42□□□□□ -1.7
CDK11AQ9UQ88 Y_RNA.142-201ENST00000363491 102 ntBASIC4.42□□□□□ -1.7
CDK11AQ9UQ88 Y_RNA.167-201ENST00000363735 109 ntBASIC4.42□□□□□ -1.7
CDK11AQ9UQ88 NDUFS5P4-201ENST00000412983 318 ntBASIC4.42□□□□□ -1.7
CDK11AQ9UQ88 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC4.42□□□□□ -1.7
CDK11AQ9UQ88 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC4.42□□□□□ -1.7
CDK11AQ9UQ88 RPS15AP5-201ENST00000436276 388 ntBASIC4.42□□□□□ -1.7
CDK11AQ9UQ88 MTND4LP16-201ENST00000440828 295 ntBASIC4.42□□□□□ -1.7
CDK11AQ9UQ88 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC4.42□□□□□ -1.7
CDK11AQ9UQ88 AC112206.3-201ENST00000514578 389 ntBASIC4.42□□□□□ -1.7
CDK11AQ9UQ88 SNORA14.1-201ENST00000516113 141 ntBASIC4.42□□□□□ -1.7
CDK11AQ9UQ88 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC4.42□□□□□ -1.7
CDK11AQ9UQ88 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC4.42□□□□□ -1.7
CDK11AQ9UQ88 AC104985.2-201ENST00000620598 500 ntBASIC4.42□□□□□ -1.7
CDK11AQ9UQ88 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC4.42□□□□□ -1.7
CDK11AQ9UQ88 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CDK11AQ9UQ88 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CDK11AQ9UQ88 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC4.41□□□□□ -1.7
CDK11AQ9UQ88 RNU6-859P-201ENST00000362728 107 ntBASIC4.41□□□□□ -1.7
CDK11AQ9UQ88 Y_RNA.263-201ENST00000364659 114 ntBASIC4.41□□□□□ -1.7
CDK11AQ9UQ88 MIR34A-201ENST00000385130 110 ntBASIC4.41□□□□□ -1.7
CDK11AQ9UQ88 RNU6-1148P-201ENST00000410992 104 ntBASIC4.41□□□□□ -1.7
CDK11AQ9UQ88 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC4.41□□□□□ -1.7
CDK11AQ9UQ88 AL353621.1-201ENST00000418219 243 ntBASIC4.41□□□□□ -1.7
CDK11AQ9UQ88 OOSP1P1-201ENST00000423265 274 ntBASIC4.41□□□□□ -1.7
CDK11AQ9UQ88 RNU6-329P-201ENST00000459618 107 ntBASIC4.41□□□□□ -1.7
CDK11AQ9UQ88 RPL31P41-201ENST00000477967 372 ntBASIC4.41□□□□□ -1.7
CDK11AQ9UQ88 RN7SL633P-201ENST00000488974 297 ntBASIC4.41□□□□□ -1.7
CDK11AQ9UQ88 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC4.41□□□□□ -1.7
CDK11AQ9UQ88 AC022493.1-201ENST00000492984 337 ntBASIC4.41□□□□□ -1.7
CDK11AQ9UQ88 RNU7-30P-201ENST00000516835 62 ntBASIC4.41□□□□□ -1.7
CDK11AQ9UQ88 AC069113.1-201ENST00000517763 267 ntBASIC4.41□□□□□ -1.7
CDK11AQ9UQ88 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC4.41□□□□□ -1.7
CDK11AQ9UQ88 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC4.41□□□□□ -1.7
CDK11AQ9UQ88 AL355598.1-201ENST00000604169 202 ntBASIC4.41□□□□□ -1.7
CDK11AQ9UQ88 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC4.41□□□□□ -1.7
CDK11AQ9UQ88 AC026241.1-201ENST00000517873 2142 ntBASIC4.4□□□□□ -1.7
CDK11AQ9UQ88 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
CDK11AQ9UQ88 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
CDK11AQ9UQ88 SNORD81.2-201ENST00000365153 76 ntBASIC4.4□□□□□ -1.71
CDK11AQ9UQ88 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC4.4□□□□□ -1.71
CDK11AQ9UQ88 AL138827.1-201ENST00000402666 306 ntBASIC4.4□□□□□ -1.71
CDK11AQ9UQ88 RNA5SP21-201ENST00000410917 96 ntBASIC4.4□□□□□ -1.71
CDK11AQ9UQ88 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CDK11AQ9UQ88 PPP1R2P5-201ENST00000457256 603 ntBASIC4.4□□□□□ -1.71
CDK11AQ9UQ88 RN7SL283P-201ENST00000489055 303 ntBASIC4.4□□□□□ -1.71
CDK11AQ9UQ88 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC4.4□□□□□ -1.71
CDK11AQ9UQ88 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC4.4□□□□□ -1.71
CDK11AQ9UQ88 AC025755.1-201ENST00000521306 278 ntBASIC4.4□□□□□ -1.71
CDK11AQ9UQ88 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC4.4□□□□□ -1.71
CDK11AQ9UQ88 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC4.4□□□□□ -1.71
CDK11AQ9UQ88 MIR4742-201ENST00000581069 85 ntBASIC4.4□□□□□ -1.71
CDK11AQ9UQ88 AC073539.2-201ENST00000597113 165 ntBASIC4.4□□□□□ -1.71
CDK11AQ9UQ88 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CDK11AQ9UQ88 AL031601.2-202ENST00000622650 282 ntBASIC4.4□□□□□ -1.71
CDK11AQ9UQ88 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CDK11AQ9UQ88 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC4.4□□□□□ -1.71
CDK11AQ9UQ88 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
CDK11AQ9UQ88 AL355596.1-201ENST00000565399 3996 ntBASIC4.39□□□□□ -1.71
CDK11AQ9UQ88 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC4.39□□□□□ -1.71
CDK11AQ9UQ88 RNU6-797P-201ENST00000363101 109 ntBASIC4.39□□□□□ -1.71
CDK11AQ9UQ88 RNU6-831P-201ENST00000384548 107 ntBASIC4.39□□□□□ -1.71
CDK11AQ9UQ88 RPL21P3-201ENST00000395517 478 ntBASIC4.39□□□□□ -1.71
CDK11AQ9UQ88 RNU6-607P-201ENST00000411283 108 ntBASIC4.39□□□□□ -1.71
CDK11AQ9UQ88 AL592148.1-201ENST00000413568 445 ntBASIC4.39□□□□□ -1.71
CDK11AQ9UQ88 RPL26P27-201ENST00000414397 437 ntBASIC4.39□□□□□ -1.71
CDK11AQ9UQ88 PDCL2P1-201ENST00000419302 352 ntBASIC4.39□□□□□ -1.71
CDK11AQ9UQ88 RAB6C-AS1-202ENST00000433431 123 ntBASIC4.39□□□□□ -1.71
CDK11AQ9UQ88 BRK1P2-201ENST00000442875 223 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms