Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 AC008033.2-201ENST00000542626 177 ntBASIC5.09□□□□□ -1.59
LHX6Q9UPM6 AC019288.1-201ENST00000557918 224 ntBASIC5.09□□□□□ -1.59
LHX6Q9UPM6 MIR3160-1-201ENST00000577972 85 ntBASIC5.09□□□□□ -1.59
LHX6Q9UPM6 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
LHX6Q9UPM6 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
LHX6Q9UPM6 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
LHX6Q9UPM6 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
LHX6Q9UPM6 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
LHX6Q9UPM6 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
LHX6Q9UPM6 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC5.09□□□□□ -1.6
LHX6Q9UPM6 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.08□□□□□ -1.6
LHX6Q9UPM6 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
LHX6Q9UPM6 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
LHX6Q9UPM6 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.08□□□□□ -1.6
LHX6Q9UPM6 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
LHX6Q9UPM6 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.08□□□□□ -1.6
LHX6Q9UPM6 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
LHX6Q9UPM6 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
LHX6Q9UPM6 SDAD1P1-202ENST00000524156 2051 ntBASIC5.08□□□□□ -1.6
LHX6Q9UPM6 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
LHX6Q9UPM6 RNU6-1125P-201ENST00000363601 107 ntBASIC5.08□□□□□ -1.6
LHX6Q9UPM6 RNU6-271P-201ENST00000363858 105 ntBASIC5.08□□□□□ -1.6
LHX6Q9UPM6 RNU6-497P-201ENST00000365316 104 ntBASIC5.08□□□□□ -1.6
LHX6Q9UPM6 RNU6-787P-201ENST00000384032 107 ntBASIC5.08□□□□□ -1.6
LHX6Q9UPM6 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC5.08□□□□□ -1.6
LHX6Q9UPM6 AL355796.1-201ENST00000406706 323 ntBASIC5.08□□□□□ -1.6
LHX6Q9UPM6 AC244098.2-201ENST00000422068 99 ntBASIC5.08□□□□□ -1.6
LHX6Q9UPM6 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.08□□□□□ -1.6
LHX6Q9UPM6 RNU4ATAC17P-201ENST00000517272 120 ntBASIC5.08□□□□□ -1.6
LHX6Q9UPM6 IGLV3-24-201ENST00000517477 197 ntBASIC5.08□□□□□ -1.6
LHX6Q9UPM6 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.08□□□□□ -1.6
LHX6Q9UPM6 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC5.08□□□□□ -1.6
LHX6Q9UPM6 MIR4662B-201ENST00000579498 81 ntBASIC5.08□□□□□ -1.6
LHX6Q9UPM6 MIR2681-201ENST00000581814 105 ntBASIC5.08□□□□□ -1.6
LHX6Q9UPM6 AC025574.2-201ENST00000615621 514 ntBASIC5.08□□□□□ -1.6
LHX6Q9UPM6 AL023881.1-201ENST00000621088 301 ntBASIC5.08□□□□□ -1.6
LHX6Q9UPM6 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
LHX6Q9UPM6 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
LHX6Q9UPM6 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC5.08□□□□□ -1.6
LHX6Q9UPM6 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
LHX6Q9UPM6 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC5.08□□□□□ -1.6
LHX6Q9UPM6 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
LHX6Q9UPM6 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5.07□□□□□ -1.6
LHX6Q9UPM6 AC107027.3-201ENST00000565095 3473 ntBASIC5.07□□□□□ -1.6
LHX6Q9UPM6 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
LHX6Q9UPM6 MAPK10-263ENST00000641052 4307 ntBASIC5.07□□□□□ -1.6
LHX6Q9UPM6 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
LHX6Q9UPM6 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
LHX6Q9UPM6 AL672296.1-201ENST00000427780 2158 ntBASIC5.07□□□□□ -1.6
LHX6Q9UPM6 SNURFL-201ENST00000309296 343 ntBASIC5.07□□□□□ -1.6
LHX6Q9UPM6 RNU6-884P-201ENST00000363889 107 ntBASIC5.07□□□□□ -1.6
LHX6Q9UPM6 Y_RNA.213-201ENST00000364178 111 ntBASIC5.07□□□□□ -1.6
LHX6Q9UPM6 SNORA63D-201ENST00000364359 132 ntBASIC5.07□□□□□ -1.6
LHX6Q9UPM6 RNA5SP332-201ENST00000391063 115 ntBASIC5.07□□□□□ -1.6
LHX6Q9UPM6 MIR1185-2-201ENST00000408687 86 ntBASIC5.07□□□□□ -1.6
LHX6Q9UPM6 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC5.07□□□□□ -1.6
LHX6Q9UPM6 AC099670.2-201ENST00000435130 321 ntBASIC5.07□□□□□ -1.6
LHX6Q9UPM6 NDUFB1P1-201ENST00000435191 180 ntBASIC5.07□□□□□ -1.6
LHX6Q9UPM6 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC5.07□□□□□ -1.6
LHX6Q9UPM6 RPS26P55-201ENST00000471178 356 ntBASIC5.07□□□□□ -1.6
LHX6Q9UPM6 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
LHX6Q9UPM6 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC5.07□□□□□ -1.6
LHX6Q9UPM6 RNU6-857P-201ENST00000515893 110 ntBASIC5.07□□□□□ -1.6
LHX6Q9UPM6 RNU2-13P-201ENST00000515909 113 ntBASIC5.07□□□□□ -1.6
LHX6Q9UPM6 MIR4311-201ENST00000580794 100 ntBASIC5.07□□□□□ -1.6
LHX6Q9UPM6 AC107294.3-201ENST00000609211 526 ntBASIC5.07□□□□□ -1.6
LHX6Q9UPM6 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
LHX6Q9UPM6 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC5.07□□□□□ -1.6
LHX6Q9UPM6 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
LHX6Q9UPM6 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC5.07□□□□□ -1.6
LHX6Q9UPM6 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
LHX6Q9UPM6 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
LHX6Q9UPM6 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
LHX6Q9UPM6 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
LHX6Q9UPM6 AC103988.1-201ENST00000566382 2177 ntBASIC5.06□□□□□ -1.6
LHX6Q9UPM6 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
LHX6Q9UPM6 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
LHX6Q9UPM6 AP005432.1-201ENST00000580891 3485 ntBASIC5.06□□□□□ -1.6
LHX6Q9UPM6 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
LHX6Q9UPM6 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
LHX6Q9UPM6 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
LHX6Q9UPM6 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
LHX6Q9UPM6 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC5.06□□□□□ -1.6
LHX6Q9UPM6 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
LHX6Q9UPM6 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
LHX6Q9UPM6 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
LHX6Q9UPM6 RNA5SP453-201ENST00000362503 119 ntBASIC5.06□□□□□ -1.6
LHX6Q9UPM6 SNORA27.1-201ENST00000362604 124 ntBASIC5.06□□□□□ -1.6
LHX6Q9UPM6 RNU6-414P-201ENST00000363705 104 ntBASIC5.06□□□□□ -1.6
LHX6Q9UPM6 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC5.06□□□□□ -1.6
LHX6Q9UPM6 NDUFB4P8-201ENST00000435351 367 ntBASIC5.06□□□□□ -1.6
LHX6Q9UPM6 snoU13.24-201ENST00000458998 104 ntBASIC5.06□□□□□ -1.6
LHX6Q9UPM6 AC005921.1-201ENST00000510589 286 ntBASIC5.06□□□□□ -1.6
LHX6Q9UPM6 AC011406.1-201ENST00000512440 370 ntBASIC5.06□□□□□ -1.6
LHX6Q9UPM6 POC1B-211ENST00000549504 581 ntTSL 5 BASIC5.06□□□□□ -1.6
LHX6Q9UPM6 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC5.06□□□□□ -1.6
LHX6Q9UPM6 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
LHX6Q9UPM6 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
LHX6Q9UPM6 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
LHX6Q9UPM6 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms