Protein–RNA interactions for Protein: Q9UKI2

CDC42EP3, Cdc42 effector protein 3, humanhuman

Predictions only

Length 254 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3Q9UKI2 MIR335-201ENST00000362173 94 ntBASIC3.5□□□□□ -1.85
CDC42EP3Q9UKI2 SNORD115-32-201ENST00000364079 82 ntBASIC3.5□□□□□ -1.85
CDC42EP3Q9UKI2 SNORA20.1-201ENST00000364790 130 ntBASIC3.5□□□□□ -1.85
CDC42EP3Q9UKI2 RNU6-1286P-201ENST00000383871 107 ntBASIC3.5□□□□□ -1.85
CDC42EP3Q9UKI2 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
CDC42EP3Q9UKI2 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CDC42EP3Q9UKI2 RNA5SP36-201ENST00000410197 133 ntBASIC3.5□□□□□ -1.85
CDC42EP3Q9UKI2 RNU2-25P-201ENST00000411041 191 ntBASIC3.5□□□□□ -1.85
CDC42EP3Q9UKI2 EIF1AXP1-201ENST00000419267 435 ntBASIC3.5□□□□□ -1.85
CDC42EP3Q9UKI2 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.5□□□□□ -1.85
CDC42EP3Q9UKI2 RPL23AP95-201ENST00000426806 265 ntBASIC3.5□□□□□ -1.85
CDC42EP3Q9UKI2 AL591043.1-201ENST00000432461 424 ntBASIC3.5□□□□□ -1.85
CDC42EP3Q9UKI2 AL590664.1-201ENST00000448065 339 ntBASIC3.5□□□□□ -1.85
CDC42EP3Q9UKI2 MTND4LP30-201ENST00000454092 297 ntBASIC3.5□□□□□ -1.85
CDC42EP3Q9UKI2 AC098869.1-201ENST00000481627 292 ntBASIC3.5□□□□□ -1.85
CDC42EP3Q9UKI2 RPL23AP49-201ENST00000492925 468 ntBASIC3.5□□□□□ -1.85
CDC42EP3Q9UKI2 AC026726.1-201ENST00000512859 601 ntBASIC3.5□□□□□ -1.85
CDC42EP3Q9UKI2 RNA5SP519-201ENST00000516480 119 ntBASIC3.5□□□□□ -1.85
CDC42EP3Q9UKI2 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.5□□□□□ -1.85
CDC42EP3Q9UKI2 AC012433.1-201ENST00000588916 398 ntBASIC3.5□□□□□ -1.85
CDC42EP3Q9UKI2 AC010201.1-201ENST00000605051 540 ntBASIC3.5□□□□□ -1.85
CDC42EP3Q9UKI2 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.5□□□□□ -1.85
CDC42EP3Q9UKI2 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
CDC42EP3Q9UKI2 MIR6891-201ENST00000618788 93 ntBASIC3.5□□□□□ -1.85
CDC42EP3Q9UKI2 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
CDC42EP3Q9UKI2 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC3.5□□□□□ -1.85
CDC42EP3Q9UKI2 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.5□□□□□ -1.85
CDC42EP3Q9UKI2 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CDC42EP3Q9UKI2 MTND5P6-201ENST00000422338 1798 ntBASIC3.5□□□□□ -1.85
CDC42EP3Q9UKI2 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CDC42EP3Q9UKI2 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC3.5□□□□□ -1.85
CDC42EP3Q9UKI2 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.49□□□□□ -1.85
CDC42EP3Q9UKI2 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CDC42EP3Q9UKI2 FAM35DP-201ENST00000323387 2712 ntBASIC3.49□□□□□ -1.85
CDC42EP3Q9UKI2 Y_RNA.20-201ENST00000362479 113 ntBASIC3.49□□□□□ -1.85
CDC42EP3Q9UKI2 RNU6-884P-201ENST00000363889 107 ntBASIC3.49□□□□□ -1.85
CDC42EP3Q9UKI2 SNORD32A-201ENST00000364805 84 ntBASIC3.49□□□□□ -1.85
CDC42EP3Q9UKI2 RNU1-100P-201ENST00000365255 165 ntBASIC3.49□□□□□ -1.85
CDC42EP3Q9UKI2 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CDC42EP3Q9UKI2 YPEL5P1-201ENST00000419731 367 ntBASIC3.49□□□□□ -1.85
CDC42EP3Q9UKI2 AL157831.1-201ENST00000426134 473 ntBASIC3.49□□□□□ -1.85
CDC42EP3Q9UKI2 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.49□□□□□ -1.85
CDC42EP3Q9UKI2 RPL21P40-201ENST00000428586 483 ntBASIC3.49□□□□□ -1.85
CDC42EP3Q9UKI2 FTH1P6-201ENST00000430768 320 ntBASIC3.49□□□□□ -1.85
CDC42EP3Q9UKI2 AC007969.2-201ENST00000441891 191 ntBASIC3.49□□□□□ -1.85
CDC42EP3Q9UKI2 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.49□□□□□ -1.85
CDC42EP3Q9UKI2 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC3.49□□□□□ -1.85
CDC42EP3Q9UKI2 SNRPGP5-201ENST00000456003 220 ntBASIC3.49□□□□□ -1.85
CDC42EP3Q9UKI2 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.49□□□□□ -1.85
CDC42EP3Q9UKI2 RNU7-87P-201ENST00000459343 62 ntBASIC3.49□□□□□ -1.85
CDC42EP3Q9UKI2 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC3.49□□□□□ -1.85
CDC42EP3Q9UKI2 RPL30P1-201ENST00000488676 339 ntBASIC3.49□□□□□ -1.85
CDC42EP3Q9UKI2 RPS23P5-201ENST00000495419 428 ntBASIC3.49□□□□□ -1.85
CDC42EP3Q9UKI2 AC097462.2-201ENST00000504623 481 ntBASIC3.49□□□□□ -1.85
CDC42EP3Q9UKI2 RNU6-1012P-201ENST00000516606 109 ntBASIC3.49□□□□□ -1.85
CDC42EP3Q9UKI2 RNA5SP73-201ENST00000516744 108 ntBASIC3.49□□□□□ -1.85
CDC42EP3Q9UKI2 AC016256.1-201ENST00000547971 354 ntBASIC3.49□□□□□ -1.85
CDC42EP3Q9UKI2 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.49□□□□□ -1.85
CDC42EP3Q9UKI2 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.49□□□□□ -1.85
CDC42EP3Q9UKI2 AC136932.1-201ENST00000574771 208 ntBASIC3.49□□□□□ -1.85
CDC42EP3Q9UKI2 AL109918.3-201ENST00000603072 338 ntBASIC3.49□□□□□ -1.85
CDC42EP3Q9UKI2 SNORA51-201ENST00000606420 132 ntBASIC3.49□□□□□ -1.85
CDC42EP3Q9UKI2 RMST_6.1-201ENST00000611980 203 ntBASIC3.49□□□□□ -1.85
CDC42EP3Q9UKI2 CENPF-206ENST00000614578 528 ntTSL 5 BASIC3.49□□□□□ -1.85
CDC42EP3Q9UKI2 AC012314.7-201ENST00000619693 93 ntBASIC3.49□□□□□ -1.85
CDC42EP3Q9UKI2 AC039056.2-201ENST00000622261 511 ntBASIC3.49□□□□□ -1.85
CDC42EP3Q9UKI2 AC097372.5-201ENST00000623665 376 ntBASIC3.49□□□□□ -1.85
CDC42EP3Q9UKI2 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
CDC42EP3Q9UKI2 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.49□□□□□ -1.85
CDC42EP3Q9UKI2 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CDC42EP3Q9UKI2 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
CDC42EP3Q9UKI2 ZNF826P-207ENST00000622273 1910 ntBASIC3.48□□□□□ -1.85
CDC42EP3Q9UKI2 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CDC42EP3Q9UKI2 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.48□□□□□ -1.85
CDC42EP3Q9UKI2 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CDC42EP3Q9UKI2 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.48□□□□□ -1.85
CDC42EP3Q9UKI2 snoU2_19.2-201ENST00000363024 80 ntBASIC3.48□□□□□ -1.85
CDC42EP3Q9UKI2 RNU1-63P-201ENST00000383902 164 ntBASIC3.48□□□□□ -1.85
CDC42EP3Q9UKI2 RNU6-968P-201ENST00000384076 107 ntBASIC3.48□□□□□ -1.85
CDC42EP3Q9UKI2 Y_RNA.439-201ENST00000384119 94 ntBASIC3.48□□□□□ -1.85
CDC42EP3Q9UKI2 RNU6-1035P-201ENST00000384477 107 ntBASIC3.48□□□□□ -1.85
CDC42EP3Q9UKI2 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
CDC42EP3Q9UKI2 RNA5SP213-201ENST00000391031 106 ntBASIC3.48□□□□□ -1.85
CDC42EP3Q9UKI2 MRPL35P1-201ENST00000404272 572 ntBASIC3.48□□□□□ -1.85
CDC42EP3Q9UKI2 TMEM167AP1-201ENST00000423409 219 ntBASIC3.48□□□□□ -1.85
CDC42EP3Q9UKI2 AL445584.1-201ENST00000431451 330 ntBASIC3.48□□□□□ -1.85
CDC42EP3Q9UKI2 AC009296.1-201ENST00000443146 155 ntBASIC3.48□□□□□ -1.85
CDC42EP3Q9UKI2 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CDC42EP3Q9UKI2 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CDC42EP3Q9UKI2 RPL23AP81-201ENST00000455252 467 ntBASIC3.48□□□□□ -1.85
CDC42EP3Q9UKI2 RPS27AP10-201ENST00000496103 208 ntBASIC3.48□□□□□ -1.85
CDC42EP3Q9UKI2 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC3.48□□□□□ -1.85
CDC42EP3Q9UKI2 AC019176.2-201ENST00000611579 315 ntBASIC3.48□□□□□ -1.85
CDC42EP3Q9UKI2 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.48□□□□□ -1.85
CDC42EP3Q9UKI2 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
CDC42EP3Q9UKI2 LINC02555-201ENST00000563933 1951 ntBASIC3.48□□□□□ -1.85
CDC42EP3Q9UKI2 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CDC42EP3Q9UKI2 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
CDC42EP3Q9UKI2 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
CDC42EP3Q9UKI2 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 124.1 ms