Protein–RNA interactions for Protein: Q9UHB6

LIMA1, LIM domain and actin-binding protein 1, humanhuman

Known RBP Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1Q9UHB6 AC006946.1-201ENST00000429106 328 ntBASIC2.84□□□□□ -1.95
LIMA1Q9UHB6 MRPS10P2-201ENST00000431226 381 ntBASIC2.84□□□□□ -1.95
LIMA1Q9UHB6 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC2.84□□□□□ -1.95
LIMA1Q9UHB6 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC2.84□□□□□ -1.95
LIMA1Q9UHB6 HMGB1P31-201ENST00000437242 427 ntBASIC2.84□□□□□ -1.95
LIMA1Q9UHB6 RPS3AP12-201ENST00000443616 753 ntBASIC2.84□□□□□ -1.95
LIMA1Q9UHB6 UBBP3-201ENST00000445497 241 ntBASIC2.84□□□□□ -1.95
LIMA1Q9UHB6 MTND3P16-201ENST00000452205 344 ntBASIC2.84□□□□□ -1.95
LIMA1Q9UHB6 RPL21P39-201ENST00000463605 483 ntBASIC2.84□□□□□ -1.95
LIMA1Q9UHB6 RPL23AP70-201ENST00000483361 460 ntBASIC2.84□□□□□ -1.95
LIMA1Q9UHB6 AC087190.1-201ENST00000484462 480 ntBASIC2.84□□□□□ -1.95
LIMA1Q9UHB6 AC093591.1-201ENST00000491435 481 ntBASIC2.84□□□□□ -1.95
LIMA1Q9UHB6 RPL21P16-201ENST00000495531 483 ntBASIC2.84□□□□□ -1.95
LIMA1Q9UHB6 RPL38P4-201ENST00000502376 214 ntBASIC2.84□□□□□ -1.95
LIMA1Q9UHB6 AC091885.1-201ENST00000506658 268 ntBASIC2.84□□□□□ -1.95
LIMA1Q9UHB6 RNU6-1038P-201ENST00000516516 104 ntBASIC2.84□□□□□ -1.95
LIMA1Q9UHB6 SNORA43.2-201ENST00000516652 128 ntBASIC2.84□□□□□ -1.95
LIMA1Q9UHB6 BTF3P12-201ENST00000519620 469 ntBASIC2.84□□□□□ -1.95
LIMA1Q9UHB6 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC2.84□□□□□ -1.95
LIMA1Q9UHB6 COX6CP5-201ENST00000527162 228 ntBASIC2.84□□□□□ -1.95
LIMA1Q9UHB6 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
LIMA1Q9UHB6 AL118558.2-201ENST00000556294 238 ntBASIC2.84□□□□□ -1.95
LIMA1Q9UHB6 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.84□□□□□ -1.95
LIMA1Q9UHB6 AC103810.1-201ENST00000579873 453 ntBASIC2.84□□□□□ -1.95
LIMA1Q9UHB6 AC008121.1-201ENST00000603244 268 ntBASIC2.84□□□□□ -1.95
LIMA1Q9UHB6 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.84□□□□□ -1.95
LIMA1Q9UHB6 RPL23AP88-201ENST00000605759 454 ntBASIC2.84□□□□□ -1.95
LIMA1Q9UHB6 DISC2.1-201ENST00000612827 205 ntBASIC2.84□□□□□ -1.95
LIMA1Q9UHB6 AC007014.2-201ENST00000615581 479 ntBASIC2.84□□□□□ -1.95
LIMA1Q9UHB6 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC2.84□□□□□ -1.95
LIMA1Q9UHB6 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.84□□□□□ -1.95
LIMA1Q9UHB6 AC138627.2-201ENST00000624202 601 ntBASIC2.84□□□□□ -1.95
LIMA1Q9UHB6 MIR3688-2-201ENST00000636963 87 ntBASIC2.84□□□□□ -1.95
LIMA1Q9UHB6 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.84□□□□□ -1.95
LIMA1Q9UHB6 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
LIMA1Q9UHB6 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.96
LIMA1Q9UHB6 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.96
LIMA1Q9UHB6 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.84□□□□□ -1.96
LIMA1Q9UHB6 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
LIMA1Q9UHB6 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
LIMA1Q9UHB6 OR4G1P-203ENST00000641984 1631 ntBASIC2.83□□□□□ -1.96
LIMA1Q9UHB6 AL109809.4-201ENST00000603520 2185 ntBASIC2.83□□□□□ -1.96
LIMA1Q9UHB6 RNU6-78P-201ENST00000362897 107 ntBASIC2.83□□□□□ -1.96
LIMA1Q9UHB6 RNU6-451P-201ENST00000362921 107 ntBASIC2.83□□□□□ -1.96
LIMA1Q9UHB6 RNU6-461P-201ENST00000364195 107 ntBASIC2.83□□□□□ -1.96
LIMA1Q9UHB6 RNA5SP387-201ENST00000364226 106 ntBASIC2.83□□□□□ -1.96
LIMA1Q9UHB6 RNU5E-7P-201ENST00000365290 117 ntBASIC2.83□□□□□ -1.96
LIMA1Q9UHB6 SET-203ENST00000372688 801 ntTSL 2 BASIC2.83□□□□□ -1.96
LIMA1Q9UHB6 MIR627-201ENST00000384979 97 ntBASIC2.83□□□□□ -1.96
LIMA1Q9UHB6 RPLP0P7-201ENST00000416050 667 ntBASIC2.83□□□□□ -1.96
LIMA1Q9UHB6 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.83□□□□□ -1.96
LIMA1Q9UHB6 RPL21P99-201ENST00000480369 423 ntBASIC2.83□□□□□ -1.96
LIMA1Q9UHB6 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.83□□□□□ -1.96
LIMA1Q9UHB6 RPL7P20-201ENST00000520308 745 ntBASIC2.83□□□□□ -1.96
LIMA1Q9UHB6 MTND1P35-201ENST00000526739 508 ntBASIC2.83□□□□□ -1.96
LIMA1Q9UHB6 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC2.83□□□□□ -1.96
LIMA1Q9UHB6 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.83□□□□□ -1.96
LIMA1Q9UHB6 VN1R80P-201ENST00000597126 338 ntBASIC2.83□□□□□ -1.96
LIMA1Q9UHB6 ATP1B3P1-201ENST00000605365 821 ntBASIC2.83□□□□□ -1.96
LIMA1Q9UHB6 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.83□□□□□ -1.96
LIMA1Q9UHB6 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
LIMA1Q9UHB6 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.83□□□□□ -1.96
LIMA1Q9UHB6 Z82195.2-201ENST00000612348 18351 ntBASIC2.83□□□□□ -1.96
LIMA1Q9UHB6 AC010329.5-201ENST00000623497 2174 ntBASIC2.83□□□□□ -1.96
LIMA1Q9UHB6 AL359854.1-201ENST00000614203 1594 ntBASIC2.83□□□□□ -1.96
LIMA1Q9UHB6 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.83□□□□□ -1.96
LIMA1Q9UHB6 RNU6-37P-201ENST00000362692 107 ntBASIC2.82□□□□□ -1.96
LIMA1Q9UHB6 RNU6-82P-201ENST00000363970 107 ntBASIC2.82□□□□□ -1.96
LIMA1Q9UHB6 RNU6-11P-201ENST00000364234 107 ntBASIC2.82□□□□□ -1.96
LIMA1Q9UHB6 Y_RNA.231-201ENST00000364358 102 ntBASIC2.82□□□□□ -1.96
LIMA1Q9UHB6 RNU6-7-201ENST00000364784 107 ntBASIC2.82□□□□□ -1.96
LIMA1Q9UHB6 RNU6-8-201ENST00000365467 107 ntBASIC2.82□□□□□ -1.96
LIMA1Q9UHB6 SNORA70.4-201ENST00000365509 134 ntBASIC2.82□□□□□ -1.96
LIMA1Q9UHB6 Y_RNA.378-201ENST00000365652 113 ntBASIC2.82□□□□□ -1.96
LIMA1Q9UHB6 RNU6-25P-201ENST00000383873 107 ntBASIC2.82□□□□□ -1.96
LIMA1Q9UHB6 RNU6-1-201ENST00000383898 107 ntBASIC2.82□□□□□ -1.96
LIMA1Q9UHB6 RNU6-48P-201ENST00000384161 107 ntBASIC2.82□□□□□ -1.96
LIMA1Q9UHB6 RNU6-36P-201ENST00000384172 107 ntBASIC2.82□□□□□ -1.96
LIMA1Q9UHB6 RNU6-4P-201ENST00000384205 107 ntBASIC2.82□□□□□ -1.96
LIMA1Q9UHB6 RNU6-5P-201ENST00000384238 107 ntBASIC2.82□□□□□ -1.96
LIMA1Q9UHB6 RNU6-3P-201ENST00000384314 107 ntBASIC2.82□□□□□ -1.96
LIMA1Q9UHB6 RNU6-16P-201ENST00000384385 107 ntBASIC2.82□□□□□ -1.96
LIMA1Q9UHB6 SNORD116-20-201ENST00000384529 92 ntBASIC2.82□□□□□ -1.96
LIMA1Q9UHB6 RNU6-15P-201ENST00000384534 107 ntBASIC2.82□□□□□ -1.96
LIMA1Q9UHB6 RNU6-2-201ENST00000384627 107 ntBASIC2.82□□□□□ -1.96
LIMA1Q9UHB6 RNU6-29P-201ENST00000384637 107 ntBASIC2.82□□□□□ -1.96
LIMA1Q9UHB6 RNU6-9-201ENST00000384776 107 ntBASIC2.82□□□□□ -1.96
LIMA1Q9UHB6 RNU6-33P-201ENST00000384793 107 ntBASIC2.82□□□□□ -1.96
LIMA1Q9UHB6 POLHP1-201ENST00000411806 470 ntBASIC2.82□□□□□ -1.96
LIMA1Q9UHB6 OR9R1P-201ENST00000412200 877 ntBASIC2.82□□□□□ -1.96
LIMA1Q9UHB6 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.82□□□□□ -1.96
LIMA1Q9UHB6 Z98742.2-201ENST00000431564 187 ntBASIC2.82□□□□□ -1.96
LIMA1Q9UHB6 AL365400.1-201ENST00000431854 640 ntBASIC2.82□□□□□ -1.96
LIMA1Q9UHB6 RPS12P2-201ENST00000439728 269 ntBASIC2.82□□□□□ -1.96
LIMA1Q9UHB6 RNU6-189P-201ENST00000516120 101 ntBASIC2.82□□□□□ -1.96
LIMA1Q9UHB6 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
LIMA1Q9UHB6 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.82□□□□□ -1.96
LIMA1Q9UHB6 CKS1BP7-201ENST00000522230 235 ntBASIC2.82□□□□□ -1.96
LIMA1Q9UHB6 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.82□□□□□ -1.96
LIMA1Q9UHB6 CR383656.8-201ENST00000549046 145 ntBASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms