Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC1.85□□□□□ -2.11
CLCF1Q9UBD9 AC006026.2-201ENST00000457376 180 ntBASIC1.85□□□□□ -2.11
CLCF1Q9UBD9 AC022364.2-201ENST00000457963 554 ntBASIC1.85□□□□□ -2.11
CLCF1Q9UBD9 RNU7-182P-201ENST00000459009 62 ntBASIC1.85□□□□□ -2.11
CLCF1Q9UBD9 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.85□□□□□ -2.11
CLCF1Q9UBD9 RPL7P43-201ENST00000478876 753 ntBASIC1.85□□□□□ -2.11
CLCF1Q9UBD9 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC1.85□□□□□ -2.11
CLCF1Q9UBD9 MTCO3P28-201ENST00000513351 515 ntBASIC1.85□□□□□ -2.11
CLCF1Q9UBD9 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC1.85□□□□□ -2.11
CLCF1Q9UBD9 Y_RNA.695-201ENST00000516715 107 ntBASIC1.85□□□□□ -2.11
CLCF1Q9UBD9 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC1.85□□□□□ -2.11
CLCF1Q9UBD9 AP005902.1-201ENST00000521358 186 ntBASIC1.85□□□□□ -2.11
CLCF1Q9UBD9 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
CLCF1Q9UBD9 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.85□□□□□ -2.11
CLCF1Q9UBD9 CR383656.8-201ENST00000549046 145 ntBASIC1.85□□□□□ -2.11
CLCF1Q9UBD9 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC1.85□□□□□ -2.11
CLCF1Q9UBD9 AL133241.1-201ENST00000556832 487 ntBASIC1.85□□□□□ -2.11
CLCF1Q9UBD9 MIR3124-201ENST00000582636 67 ntBASIC1.85□□□□□ -2.11
CLCF1Q9UBD9 AC040904.1-201ENST00000590850 223 ntBASIC1.85□□□□□ -2.11
CLCF1Q9UBD9 RPS15AP11-201ENST00000594193 385 ntBASIC1.85□□□□□ -2.11
CLCF1Q9UBD9 U2.15-201ENST00000611544 191 ntBASIC1.85□□□□□ -2.11
CLCF1Q9UBD9 AC005332.10-201ENST00000612725 619 ntBASIC1.85□□□□□ -2.11
CLCF1Q9UBD9 U2.16-201ENST00000613119 191 ntBASIC1.85□□□□□ -2.11
CLCF1Q9UBD9 U2.12-201ENST00000613778 191 ntBASIC1.85□□□□□ -2.11
CLCF1Q9UBD9 U2.20-201ENST00000613956 192 ntBASIC1.85□□□□□ -2.11
CLCF1Q9UBD9 U2.9-201ENST00000615427 191 ntBASIC1.85□□□□□ -2.11
CLCF1Q9UBD9 U2.11-201ENST00000616345 191 ntBASIC1.85□□□□□ -2.11
CLCF1Q9UBD9 U2.2-201ENST00000616535 191 ntBASIC1.85□□□□□ -2.11
CLCF1Q9UBD9 U2.3-201ENST00000617785 191 ntBASIC1.85□□□□□ -2.11
CLCF1Q9UBD9 U2.19-201ENST00000618602 191 ntBASIC1.85□□□□□ -2.11
CLCF1Q9UBD9 RNU2-1-201ENST00000618664 191 ntBASIC1.85□□□□□ -2.11
CLCF1Q9UBD9 U2.6-201ENST00000619225 191 ntBASIC1.85□□□□□ -2.11
CLCF1Q9UBD9 U2.5-201ENST00000619465 191 ntBASIC1.85□□□□□ -2.11
CLCF1Q9UBD9 MIR5739-201ENST00000619803 80 ntBASIC1.85□□□□□ -2.11
CLCF1Q9UBD9 U2.10-201ENST00000620268 191 ntBASIC1.85□□□□□ -2.11
CLCF1Q9UBD9 MIR3974-201ENST00000637126 96 ntBASIC1.85□□□□□ -2.11
CLCF1Q9UBD9 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
CLCF1Q9UBD9 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC1.85□□□□□ -2.11
CLCF1Q9UBD9 HSPA8P4-201ENST00000511877 1920 ntBASIC1.85□□□□□ -2.11
CLCF1Q9UBD9 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.85□□□□□ -2.11
CLCF1Q9UBD9 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.84□□□□□ -2.11
CLCF1Q9UBD9 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
CLCF1Q9UBD9 HAUS6P2-201ENST00000433254 2404 ntBASIC1.84□□□□□ -2.11
CLCF1Q9UBD9 RNU6-942P-201ENST00000363002 107 ntBASIC1.84□□□□□ -2.11
CLCF1Q9UBD9 SNORD114-19-201ENST00000363072 75 ntBASIC1.84□□□□□ -2.11
CLCF1Q9UBD9 SNORA62.1-201ENST00000364287 154 ntBASIC1.84□□□□□ -2.11
CLCF1Q9UBD9 SNORA6-201ENST00000384033 151 ntBASIC1.84□□□□□ -2.11
CLCF1Q9UBD9 SNORA51.11-201ENST00000384442 131 ntBASIC1.84□□□□□ -2.11
CLCF1Q9UBD9 RNU6-843P-201ENST00000384454 104 ntBASIC1.84□□□□□ -2.11
CLCF1Q9UBD9 RNY3P9-201ENST00000384727 106 ntBASIC1.84□□□□□ -2.11
CLCF1Q9UBD9 FGFR1OP2P1-201ENST00000395943 500 ntBASIC1.84□□□□□ -2.11
CLCF1Q9UBD9 MIR1289-2-201ENST00000408360 111 ntBASIC1.84□□□□□ -2.11
CLCF1Q9UBD9 RNU2-63P-201ENST00000410792 194 ntBASIC1.84□□□□□ -2.11
CLCF1Q9UBD9 AL139156.1-201ENST00000412785 841 ntBASIC1.84□□□□□ -2.11
CLCF1Q9UBD9 AC090960.1-201ENST00000421072 306 ntBASIC1.84□□□□□ -2.11
CLCF1Q9UBD9 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.84□□□□□ -2.11
CLCF1Q9UBD9 IPO7P1-201ENST00000442031 636 ntBASIC1.84□□□□□ -2.11
CLCF1Q9UBD9 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC1.84□□□□□ -2.11
CLCF1Q9UBD9 DYNLL1P5-201ENST00000467158 270 ntBASIC1.84□□□□□ -2.11
CLCF1Q9UBD9 AC117503.1-201ENST00000472241 394 ntBASIC1.84□□□□□ -2.11
CLCF1Q9UBD9 AC079804.2-201ENST00000490376 200 ntBASIC1.84□□□□□ -2.11
CLCF1Q9UBD9 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC1.84□□□□□ -2.11
CLCF1Q9UBD9 AC008526.1-201ENST00000509149 338 ntBASIC1.84□□□□□ -2.11
CLCF1Q9UBD9 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1.84□□□□□ -2.11
CLCF1Q9UBD9 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC1.84□□□□□ -2.11
CLCF1Q9UBD9 SNORD27.1-201ENST00000516319 72 ntBASIC1.84□□□□□ -2.11
CLCF1Q9UBD9 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.84□□□□□ -2.11
CLCF1Q9UBD9 AC135279.1-201ENST00000543493 504 ntBASIC1.84□□□□□ -2.11
CLCF1Q9UBD9 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.84□□□□□ -2.11
CLCF1Q9UBD9 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.84□□□□□ -2.11
CLCF1Q9UBD9 AC068790.2-201ENST00000602601 557 ntBASIC1.84□□□□□ -2.11
CLCF1Q9UBD9 AC087752.4-201ENST00000605911 462 ntBASIC1.84□□□□□ -2.11
CLCF1Q9UBD9 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.84□□□□□ -2.11
CLCF1Q9UBD9 AL158063.1-201ENST00000615349 536 ntBASIC1.84□□□□□ -2.11
CLCF1Q9UBD9 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
CLCF1Q9UBD9 AC011155.2-201ENST00000623202 216 ntBASIC1.84□□□□□ -2.11
CLCF1Q9UBD9 AC097520.1-201ENST00000624435 385 ntBASIC1.84□□□□□ -2.11
CLCF1Q9UBD9 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.84□□□□□ -2.11
CLCF1Q9UBD9 SEPT14P19-203ENST00000633205 211 ntBASIC1.84□□□□□ -2.11
CLCF1Q9UBD9 ATM-228ENST00000639240 498 ntTSL 5 BASIC1.84□□□□□ -2.11
CLCF1Q9UBD9 ATM-230ENST00000640388 578 ntTSL 5 BASIC1.84□□□□□ -2.11
CLCF1Q9UBD9 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
CLCF1Q9UBD9 ZNF720P1-201ENST00000562403 1939 ntBASIC1.83□□□□□ -2.12
CLCF1Q9UBD9 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC1.83□□□□□ -2.12
CLCF1Q9UBD9 RBBP8P1-201ENST00000449447 1844 ntBASIC1.83□□□□□ -2.12
CLCF1Q9UBD9 OR4G2P-201ENST00000328113 903 ntBASIC1.83□□□□□ -2.12
CLCF1Q9UBD9 RNU6-384P-201ENST00000364900 104 ntBASIC1.83□□□□□ -2.12
CLCF1Q9UBD9 RNA5SP240-201ENST00000365355 128 ntBASIC1.83□□□□□ -2.12
CLCF1Q9UBD9 RNU6-487P-201ENST00000365430 104 ntBASIC1.83□□□□□ -2.12
CLCF1Q9UBD9 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
CLCF1Q9UBD9 RNU1-52P-201ENST00000384190 164 ntBASIC1.83□□□□□ -2.12
CLCF1Q9UBD9 RNU6-456P-201ENST00000384493 107 ntBASIC1.83□□□□□ -2.12
CLCF1Q9UBD9 MIR1-2-201ENST00000384961 85 ntBASIC1.83□□□□□ -2.12
CLCF1Q9UBD9 RAP1BP3-201ENST00000407180 549 ntBASIC1.83□□□□□ -2.12
CLCF1Q9UBD9 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC1.83□□□□□ -2.12
CLCF1Q9UBD9 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.83□□□□□ -2.12
CLCF1Q9UBD9 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.83□□□□□ -2.12
CLCF1Q9UBD9 AC138623.1-201ENST00000418060 216 ntBASIC1.83□□□□□ -2.12
CLCF1Q9UBD9 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC1.83□□□□□ -2.12
CLCF1Q9UBD9 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 160.6 ms