Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
CCDC88CQ9P219 HAUS6P2-201ENST00000433254 2404 ntBASIC1.07□□□□□ -2.24
CCDC88CQ9P219 Y_RNA.796-201ENST00000364268 102 ntBASIC1.06□□□□□ -2.24
CCDC88CQ9P219 RNU6-621P-201ENST00000364752 109 ntBASIC1.06□□□□□ -2.24
CCDC88CQ9P219 Y_RNA.799-201ENST00000364992 102 ntBASIC1.06□□□□□ -2.24
CCDC88CQ9P219 MIR489-201ENST00000384923 84 ntBASIC1.06□□□□□ -2.24
CCDC88CQ9P219 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC1.06□□□□□ -2.24
CCDC88CQ9P219 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.06□□□□□ -2.24
CCDC88CQ9P219 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC1.06□□□□□ -2.24
CCDC88CQ9P219 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.06□□□□□ -2.24
CCDC88CQ9P219 MTND1P3-201ENST00000484956 952 ntBASIC1.06□□□□□ -2.24
CCDC88CQ9P219 LAMTOR3P2-201ENST00000504479 232 ntBASIC1.06□□□□□ -2.24
CCDC88CQ9P219 AC009902.1-201ENST00000519351 183 ntBASIC1.06□□□□□ -2.24
CCDC88CQ9P219 NAP1L1P1-201ENST00000524793 1063 ntBASIC1.06□□□□□ -2.24
CCDC88CQ9P219 AP000907.2-201ENST00000530827 353 ntBASIC1.06□□□□□ -2.24
CCDC88CQ9P219 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.06□□□□□ -2.24
CCDC88CQ9P219 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC1.06□□□□□ -2.24
CCDC88CQ9P219 MIR4285-201ENST00000581001 85 ntBASIC1.06□□□□□ -2.24
CCDC88CQ9P219 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.06□□□□□ -2.24
CCDC88CQ9P219 MIR6515-201ENST00000619843 57 ntBASIC1.06□□□□□ -2.24
CCDC88CQ9P219 OR4G1P-203ENST00000641984 1631 ntBASIC1.06□□□□□ -2.24
CCDC88CQ9P219 ZNF736P9Y-201ENST00000439586 1345 ntBASIC1.06□□□□□ -2.24
CCDC88CQ9P219 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.06□□□□□ -2.24
CCDC88CQ9P219 SNORA4.1-201ENST00000364263 144 ntBASIC1.06□□□□□ -2.24
CCDC88CQ9P219 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.06□□□□□ -2.24
CCDC88CQ9P219 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC1.06□□□□□ -2.24
CCDC88CQ9P219 AC106883.1-201ENST00000418805 562 ntBASIC1.06□□□□□ -2.24
CCDC88CQ9P219 BTF3L4P3-201ENST00000418879 476 ntBASIC1.06□□□□□ -2.24
CCDC88CQ9P219 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC1.06□□□□□ -2.24
CCDC88CQ9P219 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC1.06□□□□□ -2.24
CCDC88CQ9P219 HSFY7P-201ENST00000432672 318 ntBASIC1.06□□□□□ -2.24
CCDC88CQ9P219 HSFY8P-201ENST00000437934 318 ntBASIC1.06□□□□□ -2.24
CCDC88CQ9P219 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC1.06□□□□□ -2.24
CCDC88CQ9P219 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.06□□□□□ -2.24
CCDC88CQ9P219 AC118469.1-201ENST00000442943 488 ntBASIC1.06□□□□□ -2.24
CCDC88CQ9P219 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC1.06□□□□□ -2.24
CCDC88CQ9P219 EXOSC3P1-201ENST00000448649 500 ntBASIC1.06□□□□□ -2.24
CCDC88CQ9P219 HSFY5P-201ENST00000453726 309 ntBASIC1.06□□□□□ -2.24
CCDC88CQ9P219 AC091951.3-201ENST00000504093 246 ntBASIC1.06□□□□□ -2.24
CCDC88CQ9P219 AC008834.1-201ENST00000511612 175 ntBASIC1.06□□□□□ -2.24
CCDC88CQ9P219 AP005660.1-201ENST00000522972 293 ntBASIC1.06□□□□□ -2.24
CCDC88CQ9P219 MTCO2P15-201ENST00000532655 656 ntBASIC1.06□□□□□ -2.24
CCDC88CQ9P219 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC1.06□□□□□ -2.24
CCDC88CQ9P219 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC1.06□□□□□ -2.24
CCDC88CQ9P219 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC1.06□□□□□ -2.24
CCDC88CQ9P219 AC093249.1-201ENST00000567049 203 ntBASIC1.06□□□□□ -2.24
CCDC88CQ9P219 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.06□□□□□ -2.24
CCDC88CQ9P219 AC034229.4-201ENST00000607861 441 ntBASIC1.06□□□□□ -2.24
CCDC88CQ9P219 AC138627.2-201ENST00000624202 601 ntBASIC1.06□□□□□ -2.24
CCDC88CQ9P219 AC017037.3-201ENST00000625016 472 ntBASIC1.06□□□□□ -2.24
CCDC88CQ9P219 UGP2-231ENST00000627474 264 ntTSL 5 BASIC1.06□□□□□ -2.24
CCDC88CQ9P219 AC099654.9-201ENST00000637055 678 ntBASIC1.06□□□□□ -2.24
CCDC88CQ9P219 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
CCDC88CQ9P219 TEX21P-201ENST00000447107 1476 ntBASIC1.06□□□□□ -2.24
CCDC88CQ9P219 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
CCDC88CQ9P219 CBX3P1-201ENST00000325243 554 ntBASIC1.05□□□□□ -2.24
CCDC88CQ9P219 RNU1-58P-201ENST00000362413 163 ntBASIC1.05□□□□□ -2.24
CCDC88CQ9P219 RNU5E-6P-201ENST00000365574 115 ntBASIC1.05□□□□□ -2.24
CCDC88CQ9P219 AL591034.2-201ENST00000402839 359 ntBASIC1.05□□□□□ -2.24
CCDC88CQ9P219 AL139397.2-201ENST00000404529 772 ntBASIC1.05□□□□□ -2.24
CCDC88CQ9P219 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC1.05□□□□□ -2.24
CCDC88CQ9P219 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC1.05□□□□□ -2.24
CCDC88CQ9P219 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.05□□□□□ -2.24
CCDC88CQ9P219 LARP1BP3-201ENST00000437229 869 ntBASIC1.05□□□□□ -2.24
CCDC88CQ9P219 ACA59.2-201ENST00000517061 156 ntBASIC1.05□□□□□ -2.24
CCDC88CQ9P219 SCARNA1-201ENST00000517138 166 ntBASIC1.05□□□□□ -2.24
CCDC88CQ9P219 AC107934.1-201ENST00000522215 217 ntBASIC1.05□□□□□ -2.24
CCDC88CQ9P219 AC136618.2-201ENST00000575091 400 ntBASIC1.05□□□□□ -2.24
CCDC88CQ9P219 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.05□□□□□ -2.24
CCDC88CQ9P219 CYP2C61P-201ENST00000604072 290 ntBASIC1.05□□□□□ -2.24
CCDC88CQ9P219 AL157392.4-201ENST00000609756 345 ntBASIC1.05□□□□□ -2.24
CCDC88CQ9P219 RMST_2.1-201ENST00000617263 136 ntBASIC1.05□□□□□ -2.24
CCDC88CQ9P219 AL031667.3-201ENST00000620124 655 ntBASIC1.05□□□□□ -2.24
CCDC88CQ9P219 AL133216.2-202ENST00000634512 349 ntBASIC1.05□□□□□ -2.24
CCDC88CQ9P219 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC1.05□□□□□ -2.24
CCDC88CQ9P219 RNU6-395P-201ENST00000365662 106 ntBASIC1.05□□□□□ -2.24
CCDC88CQ9P219 SMIM11P1-201ENST00000369586 178 ntBASIC1.05□□□□□ -2.24
CCDC88CQ9P219 RNU6-946P-201ENST00000383878 107 ntBASIC1.05□□□□□ -2.24
CCDC88CQ9P219 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.05□□□□□ -2.24
CCDC88CQ9P219 AC009518.2-201ENST00000418056 731 ntBASIC1.05□□□□□ -2.24
CCDC88CQ9P219 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC1.05□□□□□ -2.24
CCDC88CQ9P219 MTCO3P5-201ENST00000433620 714 ntBASIC1.05□□□□□ -2.24
CCDC88CQ9P219 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC1.05□□□□□ -2.24
CCDC88CQ9P219 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC1.05□□□□□ -2.24
CCDC88CQ9P219 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.05□□□□□ -2.24
CCDC88CQ9P219 CECR9-201ENST00000453421 199 ntBASIC1.05□□□□□ -2.24
CCDC88CQ9P219 TOMM22P6-201ENST00000465035 409 ntBASIC1.05□□□□□ -2.24
CCDC88CQ9P219 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.05□□□□□ -2.24
CCDC88CQ9P219 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC1.05□□□□□ -2.24
CCDC88CQ9P219 AC112206.4-201ENST00000515142 405 ntBASIC1.05□□□□□ -2.24
CCDC88CQ9P219 RNU6-678P-201ENST00000516832 109 ntBASIC1.05□□□□□ -2.24
CCDC88CQ9P219 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.05□□□□□ -2.24
CCDC88CQ9P219 AC135279.1-201ENST00000543493 504 ntBASIC1.05□□□□□ -2.24
CCDC88CQ9P219 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC1.05□□□□□ -2.24
CCDC88CQ9P219 AC093012.1-202ENST00000549403 582 ntBASIC1.05□□□□□ -2.24
CCDC88CQ9P219 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC1.05□□□□□ -2.24
CCDC88CQ9P219 AC022254.1-201ENST00000567857 235 ntBASIC1.05□□□□□ -2.24
CCDC88CQ9P219 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.05□□□□□ -2.24
CCDC88CQ9P219 AC021646.1-201ENST00000605469 484 ntBASIC1.05□□□□□ -2.24
CCDC88CQ9P219 AL359547.2-201ENST00000615810 418 ntBASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms