Protein–RNA interactions for Protein: Q9P031

CCDC59, Thyroid transcription factor 1-associated protein 26, humanhuman

Known RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59Q9P031 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.6□□□□□ -2.15
CCDC59Q9P031 SNORA3.4-201ENST00000515969 96 ntBASIC1.6□□□□□ -2.15
CCDC59Q9P031 RNU6-965P-201ENST00000516721 96 ntBASIC1.6□□□□□ -2.15
CCDC59Q9P031 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.6□□□□□ -2.15
CCDC59Q9P031 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC1.6□□□□□ -2.15
CCDC59Q9P031 AC007375.1-201ENST00000554513 578 ntBASIC1.6□□□□□ -2.15
CCDC59Q9P031 AC078795.2-201ENST00000602835 1252 ntBASIC1.6□□□□□ -2.15
CCDC59Q9P031 AC005000.2-201ENST00000605468 310 ntBASIC1.6□□□□□ -2.15
CCDC59Q9P031 AC026790.2-201ENST00000606282 430 ntBASIC1.6□□□□□ -2.15
CCDC59Q9P031 MIR6873-201ENST00000622788 63 ntBASIC1.6□□□□□ -2.15
CCDC59Q9P031 AC007792.1-201ENST00000623023 402 ntBASIC1.6□□□□□ -2.15
CCDC59Q9P031 AP003485.2-201ENST00000623636 610 ntBASIC1.6□□□□□ -2.15
CCDC59Q9P031 snoU2_19.1-201ENST00000362361 80 ntBASIC1.59□□□□□ -2.15
CCDC59Q9P031 SNORA5B-201ENST00000363786 132 ntBASIC1.59□□□□□ -2.15
CCDC59Q9P031 RNY1P12-201ENST00000364251 105 ntBASIC1.59□□□□□ -2.15
CCDC59Q9P031 SNORA20.2-201ENST00000383922 131 ntBASIC1.59□□□□□ -2.15
CCDC59Q9P031 SNORD14D-201ENST00000384390 87 ntBASIC1.59□□□□□ -2.15
CCDC59Q9P031 RNA5SP465-201ENST00000391195 109 ntBASIC1.59□□□□□ -2.15
CCDC59Q9P031 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.59□□□□□ -2.15
CCDC59Q9P031 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.59□□□□□ -2.15
CCDC59Q9P031 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC1.59□□□□□ -2.15
CCDC59Q9P031 AC000111.3-201ENST00000433478 193 ntBASIC1.59□□□□□ -2.15
CCDC59Q9P031 UBE2D3P4-201ENST00000441973 436 ntBASIC1.59□□□□□ -2.15
CCDC59Q9P031 AC245102.2-201ENST00000448956 180 ntBASIC1.59□□□□□ -2.15
CCDC59Q9P031 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC1.59□□□□□ -2.15
CCDC59Q9P031 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC1.59□□□□□ -2.15
CCDC59Q9P031 PTP4A1P4-201ENST00000512479 322 ntBASIC1.59□□□□□ -2.15
CCDC59Q9P031 AC117532.1-201ENST00000514638 323 ntBASIC1.59□□□□□ -2.15
CCDC59Q9P031 EEF1A1P37-201ENST00000522748 715 ntBASIC1.59□□□□□ -2.15
CCDC59Q9P031 CBX3P4-201ENST00000538909 354 ntBASIC1.59□□□□□ -2.15
CCDC59Q9P031 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.59□□□□□ -2.15
CCDC59Q9P031 AC026464.5-201ENST00000562497 722 ntBASIC1.59□□□□□ -2.15
CCDC59Q9P031 MIR5692A1-201ENST00000580523 69 ntBASIC1.59□□□□□ -2.15
CCDC59Q9P031 AC005771.1-201ENST00000585581 349 ntBASIC1.59□□□□□ -2.15
CCDC59Q9P031 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
CCDC59Q9P031 CLPTM1LP1-201ENST00000604519 484 ntBASIC1.59□□□□□ -2.15
CCDC59Q9P031 AL121992.2-201ENST00000606262 256 ntBASIC1.59□□□□□ -2.15
CCDC59Q9P031 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.59□□□□□ -2.15
CCDC59Q9P031 AC091304.9-201ENST00000612091 226 ntBASIC1.59□□□□□ -2.15
CCDC59Q9P031 AC004223.4-201ENST00000612426 332 ntBASIC1.59□□□□□ -2.15
CCDC59Q9P031 AL050303.3-201ENST00000613704 284 ntBASIC1.59□□□□□ -2.15
CCDC59Q9P031 RMST_7.1-201ENST00000621935 268 ntBASIC1.59□□□□□ -2.15
CCDC59Q9P031 YWHAEP7-203ENST00000622054 312 ntBASIC1.59□□□□□ -2.15
CCDC59Q9P031 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.59□□□□□ -2.16
CCDC59Q9P031 AC002543.1-201ENST00000299783 1954 ntBASIC1.59□□□□□ -2.16
CCDC59Q9P031 RNA5SP289-201ENST00000362332 137 ntBASIC1.58□□□□□ -2.16
CCDC59Q9P031 U8.3-201ENST00000363321 132 ntBASIC1.58□□□□□ -2.16
CCDC59Q9P031 RNU6-179P-201ENST00000363350 107 ntBASIC1.58□□□□□ -2.16
CCDC59Q9P031 SNORA80A-201ENST00000363922 136 ntBASIC1.58□□□□□ -2.16
CCDC59Q9P031 RNU6-743P-201ENST00000364151 106 ntBASIC1.58□□□□□ -2.16
CCDC59Q9P031 MIR491-201ENST00000384877 84 ntBASIC1.58□□□□□ -2.16
CCDC59Q9P031 MIR29B2-201ENST00000385055 81 ntBASIC1.58□□□□□ -2.16
CCDC59Q9P031 RNU11-3P-201ENST00000391111 133 ntBASIC1.58□□□□□ -2.16
CCDC59Q9P031 RAP1BP3-201ENST00000407180 549 ntBASIC1.58□□□□□ -2.16
CCDC59Q9P031 RNU2-8P-201ENST00000410727 190 ntBASIC1.58□□□□□ -2.16
CCDC59Q9P031 OR9R1P-201ENST00000412200 877 ntBASIC1.58□□□□□ -2.16
CCDC59Q9P031 BTF3L4P1-201ENST00000413813 468 ntBASIC1.58□□□□□ -2.16
CCDC59Q9P031 AC013410.2-201ENST00000422627 201 ntBASIC1.58□□□□□ -2.16
CCDC59Q9P031 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC1.58□□□□□ -2.16
CCDC59Q9P031 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.58□□□□□ -2.16
CCDC59Q9P031 TAF9P1-201ENST00000445421 515 ntBASIC1.58□□□□□ -2.16
CCDC59Q9P031 FDX1P2-201ENST00000450769 375 ntBASIC1.58□□□□□ -2.16
CCDC59Q9P031 TAF9P2-201ENST00000454958 515 ntBASIC1.58□□□□□ -2.16
CCDC59Q9P031 RAP1BP2-201ENST00000478270 544 ntBASIC1.58□□□□□ -2.16
CCDC59Q9P031 AC004924.1-201ENST00000480160 781 ntBASIC1.58□□□□□ -2.16
CCDC59Q9P031 AC096745.1-201ENST00000509945 370 ntBASIC1.58□□□□□ -2.16
CCDC59Q9P031 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.58□□□□□ -2.16
CCDC59Q9P031 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC1.58□□□□□ -2.16
CCDC59Q9P031 SCARNA24.1-201ENST00000516465 137 ntBASIC1.58□□□□□ -2.16
CCDC59Q9P031 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC1.58□□□□□ -2.16
CCDC59Q9P031 AP005660.1-201ENST00000522972 293 ntBASIC1.58□□□□□ -2.16
CCDC59Q9P031 AC022880.1-201ENST00000534017 973 ntBASIC1.58□□□□□ -2.16
CCDC59Q9P031 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC1.58□□□□□ -2.16
CCDC59Q9P031 HSBP1P1-201ENST00000555205 166 ntBASIC1.58□□□□□ -2.16
CCDC59Q9P031 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC1.58□□□□□ -2.16
CCDC59Q9P031 AC234772.3-201ENST00000602277 528 ntBASIC1.58□□□□□ -2.16
CCDC59Q9P031 AL022161.1-201ENST00000604390 213 ntBASIC1.58□□□□□ -2.16
CCDC59Q9P031 AC024933.1-201ENST00000608472 348 ntBASIC1.58□□□□□ -2.16
CCDC59Q9P031 AL159153.1-201ENST00000619688 317 ntBASIC1.58□□□□□ -2.16
CCDC59Q9P031 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.58□□□□□ -2.16
CCDC59Q9P031 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
CCDC59Q9P031 RNU6-78P-201ENST00000362897 107 ntBASIC1.57□□□□□ -2.16
CCDC59Q9P031 MIR597-201ENST00000384968 97 ntBASIC1.57□□□□□ -2.16
CCDC59Q9P031 RNA5SP212-201ENST00000391223 107 ntBASIC1.57□□□□□ -2.16
CCDC59Q9P031 BTF3L4P2-201ENST00000392798 346 ntBASIC1.57□□□□□ -2.16
CCDC59Q9P031 AC019129.1-201ENST00000403786 261 ntBASIC1.57□□□□□ -2.16
CCDC59Q9P031 Y_RNA.598-201ENST00000410480 95 ntBASIC1.57□□□□□ -2.16
CCDC59Q9P031 MTATP6P16-201ENST00000434543 526 ntBASIC1.57□□□□□ -2.16
CCDC59Q9P031 AC104850.1-201ENST00000435940 476 ntBASIC1.57□□□□□ -2.16
CCDC59Q9P031 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.57□□□□□ -2.16
CCDC59Q9P031 AC116562.3-201ENST00000506136 177 ntBASIC1.57□□□□□ -2.16
CCDC59Q9P031 MTND3P25-201ENST00000509243 135 ntBASIC1.57□□□□□ -2.16
CCDC59Q9P031 RNU6-685P-201ENST00000517088 95 ntBASIC1.57□□□□□ -2.16
CCDC59Q9P031 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC1.57□□□□□ -2.16
CCDC59Q9P031 AC068587.5-201ENST00000528506 175 ntBASIC1.57□□□□□ -2.16
CCDC59Q9P031 AP002453.2-201ENST00000533503 320 ntBASIC1.57□□□□□ -2.16
CCDC59Q9P031 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.57□□□□□ -2.16
CCDC59Q9P031 AC018630.3-201ENST00000542637 96 ntBASIC1.57□□□□□ -2.16
CCDC59Q9P031 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.57□□□□□ -2.16
CCDC59Q9P031 AC009977.1-201ENST00000586015 570 ntBASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 125.1 ms