Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 SNORD19B-201ENST00000459623 84 ntBASIC3.11□□□□□ -1.91
NCKIPSDQ9NZQ3 AC096576.1-201ENST00000489014 359 ntBASIC3.11□□□□□ -1.91
NCKIPSDQ9NZQ3 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC3.11□□□□□ -1.91
NCKIPSDQ9NZQ3 RNU6-566P-201ENST00000516790 107 ntBASIC3.11□□□□□ -1.91
NCKIPSDQ9NZQ3 AC025755.1-201ENST00000521306 278 ntBASIC3.11□□□□□ -1.91
NCKIPSDQ9NZQ3 AL391261.3-201ENST00000557194 520 ntBASIC3.11□□□□□ -1.91
NCKIPSDQ9NZQ3 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.11□□□□□ -1.91
NCKIPSDQ9NZQ3 AC023043.2-201ENST00000589678 1026 ntBASIC3.11□□□□□ -1.91
NCKIPSDQ9NZQ3 AL137843.1-201ENST00000605078 385 ntBASIC3.11□□□□□ -1.91
NCKIPSDQ9NZQ3 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.11□□□□□ -1.91
NCKIPSDQ9NZQ3 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.11□□□□□ -1.91
NCKIPSDQ9NZQ3 AC134503.1-201ENST00000633048 54 ntBASIC3.11□□□□□ -1.91
NCKIPSDQ9NZQ3 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
NCKIPSDQ9NZQ3 MTND4P27-201ENST00000450813 1354 ntBASIC3.11□□□□□ -1.91
NCKIPSDQ9NZQ3 AC000403.1-201ENST00000613696 3585 ntBASIC3.11□□□□□ -1.91
NCKIPSDQ9NZQ3 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
NCKIPSDQ9NZQ3 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
NCKIPSDQ9NZQ3 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
NCKIPSDQ9NZQ3 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.1□□□□□ -1.91
NCKIPSDQ9NZQ3 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
NCKIPSDQ9NZQ3 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.1□□□□□ -1.91
NCKIPSDQ9NZQ3 RNU1-73P-201ENST00000383971 164 ntBASIC3.1□□□□□ -1.91
NCKIPSDQ9NZQ3 Y_RNA.510-201ENST00000384511 114 ntBASIC3.1□□□□□ -1.91
NCKIPSDQ9NZQ3 SNORD116-29-201ENST00000384516 83 ntBASIC3.1□□□□□ -1.91
NCKIPSDQ9NZQ3 SNORD15B-201ENST00000384714 146 ntBASIC3.1□□□□□ -1.91
NCKIPSDQ9NZQ3 RNA5SP344-201ENST00000411081 104 ntBASIC3.1□□□□□ -1.91
NCKIPSDQ9NZQ3 RPL26P27-201ENST00000414397 437 ntBASIC3.1□□□□□ -1.91
NCKIPSDQ9NZQ3 RPL21P90-201ENST00000415692 466 ntBASIC3.1□□□□□ -1.91
NCKIPSDQ9NZQ3 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
NCKIPSDQ9NZQ3 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.1□□□□□ -1.91
NCKIPSDQ9NZQ3 MTCO2P27-201ENST00000420740 428 ntBASIC3.1□□□□□ -1.91
NCKIPSDQ9NZQ3 RPL7P37-201ENST00000425095 738 ntBASIC3.1□□□□□ -1.91
NCKIPSDQ9NZQ3 SKA2P1-201ENST00000425592 390 ntBASIC3.1□□□□□ -1.91
NCKIPSDQ9NZQ3 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.1□□□□□ -1.91
NCKIPSDQ9NZQ3 AC007560.1-201ENST00000426912 237 ntBASIC3.1□□□□□ -1.91
NCKIPSDQ9NZQ3 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.1□□□□□ -1.91
NCKIPSDQ9NZQ3 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC3.1□□□□□ -1.91
NCKIPSDQ9NZQ3 NIPA2P5-201ENST00000452282 464 ntBASIC3.1□□□□□ -1.91
NCKIPSDQ9NZQ3 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.1□□□□□ -1.91
NCKIPSDQ9NZQ3 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC3.1□□□□□ -1.91
NCKIPSDQ9NZQ3 AC022493.1-201ENST00000492984 337 ntBASIC3.1□□□□□ -1.91
NCKIPSDQ9NZQ3 MTND3P25-201ENST00000509243 135 ntBASIC3.1□□□□□ -1.91
NCKIPSDQ9NZQ3 RNU6-1170P-201ENST00000515974 106 ntBASIC3.1□□□□□ -1.91
NCKIPSDQ9NZQ3 RNU6-1045P-201ENST00000516321 107 ntBASIC3.1□□□□□ -1.91
NCKIPSDQ9NZQ3 SNORA25.17-201ENST00000517184 124 ntBASIC3.1□□□□□ -1.91
NCKIPSDQ9NZQ3 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
NCKIPSDQ9NZQ3 FRG2DP-202ENST00000566967 323 ntBASIC3.1□□□□□ -1.91
NCKIPSDQ9NZQ3 MIR5692A1-201ENST00000580523 69 ntBASIC3.1□□□□□ -1.91
NCKIPSDQ9NZQ3 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.1□□□□□ -1.91
NCKIPSDQ9NZQ3 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.1□□□□□ -1.91
NCKIPSDQ9NZQ3 AP001836.1-201ENST00000604675 523 ntBASIC3.1□□□□□ -1.91
NCKIPSDQ9NZQ3 APOOP1-201ENST00000604695 592 ntBASIC3.1□□□□□ -1.91
NCKIPSDQ9NZQ3 AC002044.1-201ENST00000606707 158 ntBASIC3.1□□□□□ -1.91
NCKIPSDQ9NZQ3 AL627309.6-201ENST00000606857 840 ntBASIC3.1□□□□□ -1.91
NCKIPSDQ9NZQ3 MIR7106-201ENST00000612419 65 ntBASIC3.1□□□□□ -1.91
NCKIPSDQ9NZQ3 AC004852.3-201ENST00000614131 326 ntBASIC3.1□□□□□ -1.91
NCKIPSDQ9NZQ3 AL138726.1-201ENST00000614873 333 ntBASIC3.1□□□□□ -1.91
NCKIPSDQ9NZQ3 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC3.1□□□□□ -1.91
NCKIPSDQ9NZQ3 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.09□□□□□ -1.91
NCKIPSDQ9NZQ3 ZNF519P1-201ENST00000449011 1626 ntBASIC3.09□□□□□ -1.91
NCKIPSDQ9NZQ3 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
NCKIPSDQ9NZQ3 Y_RNA.128-201ENST00000363391 112 ntBASIC3.09□□□□□ -1.91
NCKIPSDQ9NZQ3 Y_RNA.138-201ENST00000363462 102 ntBASIC3.09□□□□□ -1.91
NCKIPSDQ9NZQ3 MIR450B-201ENST00000401182 78 ntBASIC3.09□□□□□ -1.91
NCKIPSDQ9NZQ3 RN7SKP158-201ENST00000410453 326 ntBASIC3.09□□□□□ -1.91
NCKIPSDQ9NZQ3 NDUFS5P4-201ENST00000412983 318 ntBASIC3.09□□□□□ -1.91
NCKIPSDQ9NZQ3 CYCSP33-201ENST00000414485 327 ntBASIC3.09□□□□□ -1.91
NCKIPSDQ9NZQ3 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC3.09□□□□□ -1.91
NCKIPSDQ9NZQ3 AC107083.1-201ENST00000439643 279 ntBASIC3.09□□□□□ -1.91
NCKIPSDQ9NZQ3 RPL32P28-201ENST00000443577 397 ntBASIC3.09□□□□□ -1.91
NCKIPSDQ9NZQ3 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.09□□□□□ -1.91
NCKIPSDQ9NZQ3 MTND1P17-201ENST00000448961 204 ntBASIC3.09□□□□□ -1.91
NCKIPSDQ9NZQ3 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3.09□□□□□ -1.91
NCKIPSDQ9NZQ3 AC128713.1-201ENST00000471495 306 ntBASIC3.09□□□□□ -1.91
NCKIPSDQ9NZQ3 RPS29P20-201ENST00000489592 171 ntBASIC3.09□□□□□ -1.91
NCKIPSDQ9NZQ3 AC104136.1-201ENST00000512969 394 ntBASIC3.09□□□□□ -1.91
NCKIPSDQ9NZQ3 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.09□□□□□ -1.91
NCKIPSDQ9NZQ3 RN7SKP43-201ENST00000516173 320 ntBASIC3.09□□□□□ -1.91
NCKIPSDQ9NZQ3 RNU6-572P-201ENST00000516724 80 ntBASIC3.09□□□□□ -1.91
NCKIPSDQ9NZQ3 SNORA31.21-201ENST00000517180 77 ntBASIC3.09□□□□□ -1.91
NCKIPSDQ9NZQ3 RNA5SP454-201ENST00000517231 127 ntBASIC3.09□□□□□ -1.91
NCKIPSDQ9NZQ3 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC3.09□□□□□ -1.91
NCKIPSDQ9NZQ3 HMGN2P15-201ENST00000585707 270 ntBASIC3.09□□□□□ -1.91
NCKIPSDQ9NZQ3 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.09□□□□□ -1.91
NCKIPSDQ9NZQ3 AC090971.5-201ENST00000621102 293 ntBASIC3.09□□□□□ -1.91
NCKIPSDQ9NZQ3 AC006386.2-201ENST00000624491 75 ntBASIC3.09□□□□□ -1.91
NCKIPSDQ9NZQ3 AC012005.1-201ENST00000624575 75 ntBASIC3.09□□□□□ -1.91
NCKIPSDQ9NZQ3 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.09□□□□□ -1.91
NCKIPSDQ9NZQ3 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
NCKIPSDQ9NZQ3 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
NCKIPSDQ9NZQ3 SNORD3E-201ENST00000362899 217 ntBASIC3.08□□□□□ -1.92
NCKIPSDQ9NZQ3 RNU6-778P-201ENST00000363269 103 ntBASIC3.08□□□□□ -1.92
NCKIPSDQ9NZQ3 RNU6-266P-201ENST00000364225 107 ntBASIC3.08□□□□□ -1.92
NCKIPSDQ9NZQ3 SNORA71.1-201ENST00000364523 117 ntBASIC3.08□□□□□ -1.92
NCKIPSDQ9NZQ3 SNORD116-11-201ENST00000383882 92 ntBASIC3.08□□□□□ -1.92
NCKIPSDQ9NZQ3 Y_RNA.422-201ENST00000384054 114 ntBASIC3.08□□□□□ -1.92
NCKIPSDQ9NZQ3 RNU6-1179P-201ENST00000384667 107 ntBASIC3.08□□□□□ -1.92
NCKIPSDQ9NZQ3 AL031121.1-201ENST00000406553 254 ntBASIC3.08□□□□□ -1.92
NCKIPSDQ9NZQ3 RNU2-3P-201ENST00000410144 191 ntBASIC3.08□□□□□ -1.92
NCKIPSDQ9NZQ3 RNA5SP274-201ENST00000410484 108 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms