Protein–RNA interactions for Protein: Q9NZC9

SMARCAL1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, humanhuman

Predictions only

Length 954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1Q9NZC9 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.88□□□□□ -1.95
SMARCAL1Q9NZC9 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
SMARCAL1Q9NZC9 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.88□□□□□ -1.95
SMARCAL1Q9NZC9 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.88□□□□□ -1.95
SMARCAL1Q9NZC9 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.87□□□□□ -1.95
SMARCAL1Q9NZC9 RNU4-79P-201ENST00000362764 141 ntBASIC2.87□□□□□ -1.95
SMARCAL1Q9NZC9 Y_RNA.67-201ENST00000362870 100 ntBASIC2.87□□□□□ -1.95
SMARCAL1Q9NZC9 RNU6-395P-201ENST00000365662 106 ntBASIC2.87□□□□□ -1.95
SMARCAL1Q9NZC9 Y_RNA.535-201ENST00000384612 99 ntBASIC2.87□□□□□ -1.95
SMARCAL1Q9NZC9 RNA5SP210-201ENST00000391034 120 ntBASIC2.87□□□□□ -1.95
SMARCAL1Q9NZC9 RPS4XP3-201ENST00000398541 413 ntBASIC2.87□□□□□ -1.95
SMARCAL1Q9NZC9 RNU2-3P-201ENST00000410144 191 ntBASIC2.87□□□□□ -1.95
SMARCAL1Q9NZC9 RNU2-68P-201ENST00000410878 191 ntBASIC2.87□□□□□ -1.95
SMARCAL1Q9NZC9 RNU6-607P-201ENST00000411283 108 ntBASIC2.87□□□□□ -1.95
SMARCAL1Q9NZC9 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.87□□□□□ -1.95
SMARCAL1Q9NZC9 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC2.87□□□□□ -1.95
SMARCAL1Q9NZC9 RPL7P10-201ENST00000417407 739 ntBASIC2.87□□□□□ -1.95
SMARCAL1Q9NZC9 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.87□□□□□ -1.95
SMARCAL1Q9NZC9 AL353621.1-201ENST00000418219 243 ntBASIC2.87□□□□□ -1.95
SMARCAL1Q9NZC9 MYL8P-204ENST00000431574 518 ntBASIC2.87□□□□□ -1.95
SMARCAL1Q9NZC9 AC112220.1-201ENST00000434628 355 ntBASIC2.87□□□□□ -1.95
SMARCAL1Q9NZC9 SNRPEP9-201ENST00000436794 238 ntBASIC2.87□□□□□ -1.95
SMARCAL1Q9NZC9 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.87□□□□□ -1.95
SMARCAL1Q9NZC9 AL031183.1-201ENST00000457667 207 ntBASIC2.87□□□□□ -1.95
SMARCAL1Q9NZC9 AC133134.1-201ENST00000466800 359 ntBASIC2.87□□□□□ -1.95
SMARCAL1Q9NZC9 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.87□□□□□ -1.95
SMARCAL1Q9NZC9 AC090525.1-201ENST00000479116 478 ntBASIC2.87□□□□□ -1.95
SMARCAL1Q9NZC9 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.87□□□□□ -1.95
SMARCAL1Q9NZC9 AC083906.5-201ENST00000503722 328 ntBASIC2.87□□□□□ -1.95
SMARCAL1Q9NZC9 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.87□□□□□ -1.95
SMARCAL1Q9NZC9 RNU6-1332P-201ENST00000516666 104 ntBASIC2.87□□□□□ -1.95
SMARCAL1Q9NZC9 RNU6-566P-201ENST00000516790 107 ntBASIC2.87□□□□□ -1.95
SMARCAL1Q9NZC9 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.87□□□□□ -1.95
SMARCAL1Q9NZC9 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.87□□□□□ -1.95
SMARCAL1Q9NZC9 AL359198.2-201ENST00000611836 194 ntBASIC2.87□□□□□ -1.95
SMARCAL1Q9NZC9 AC027309.3-201ENST00000623419 351 ntBASIC2.87□□□□□ -1.95
SMARCAL1Q9NZC9 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.87□□□□□ -1.95
SMARCAL1Q9NZC9 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.87□□□□□ -1.95
SMARCAL1Q9NZC9 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.86□□□□□ -1.95
SMARCAL1Q9NZC9 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
SMARCAL1Q9NZC9 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
SMARCAL1Q9NZC9 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
SMARCAL1Q9NZC9 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
SMARCAL1Q9NZC9 Y_RNA.11-201ENST00000362375 109 ntBASIC2.86□□□□□ -1.95
SMARCAL1Q9NZC9 Y_RNA.212-201ENST00000364177 102 ntBASIC2.86□□□□□ -1.95
SMARCAL1Q9NZC9 RNU1-140P-201ENST00000365040 165 ntBASIC2.86□□□□□ -1.95
SMARCAL1Q9NZC9 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC2.86□□□□□ -1.95
SMARCAL1Q9NZC9 SNORA18.3-201ENST00000384122 132 ntBASIC2.86□□□□□ -1.95
SMARCAL1Q9NZC9 SNORA1.3-201ENST00000384676 136 ntBASIC2.86□□□□□ -1.95
SMARCAL1Q9NZC9 MIR548F5-201ENST00000408421 86 ntBASIC2.86□□□□□ -1.95
SMARCAL1Q9NZC9 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.86□□□□□ -1.95
SMARCAL1Q9NZC9 MTND4P28-201ENST00000426217 387 ntBASIC2.86□□□□□ -1.95
SMARCAL1Q9NZC9 AC233279.1-201ENST00000455300 423 ntBASIC2.86□□□□□ -1.95
SMARCAL1Q9NZC9 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.86□□□□□ -1.95
SMARCAL1Q9NZC9 RNU6-1282P-201ENST00000516735 96 ntBASIC2.86□□□□□ -1.95
SMARCAL1Q9NZC9 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.86□□□□□ -1.95
SMARCAL1Q9NZC9 COPS8P3-201ENST00000526024 482 ntBASIC2.86□□□□□ -1.95
SMARCAL1Q9NZC9 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.86□□□□□ -1.95
SMARCAL1Q9NZC9 LRRC37A5P-203ENST00000580181 585 ntBASIC2.86□□□□□ -1.95
SMARCAL1Q9NZC9 NUTF2P8-201ENST00000604593 363 ntBASIC2.86□□□□□ -1.95
SMARCAL1Q9NZC9 AL022345.1-201ENST00000607292 135 ntBASIC2.86□□□□□ -1.95
SMARCAL1Q9NZC9 AL138726.1-201ENST00000614873 333 ntBASIC2.86□□□□□ -1.95
SMARCAL1Q9NZC9 AL138880.2-201ENST00000616214 239 ntBASIC2.86□□□□□ -1.95
SMARCAL1Q9NZC9 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC2.86□□□□□ -1.95
SMARCAL1Q9NZC9 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.86□□□□□ -1.95
SMARCAL1Q9NZC9 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.85□□□□□ -1.95
SMARCAL1Q9NZC9 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
SMARCAL1Q9NZC9 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.85□□□□□ -1.95
SMARCAL1Q9NZC9 SNORA25.6-201ENST00000364121 118 ntBASIC2.85□□□□□ -1.95
SMARCAL1Q9NZC9 RNU6-384P-201ENST00000364900 104 ntBASIC2.85□□□□□ -1.95
SMARCAL1Q9NZC9 Y_RNA.339-201ENST00000365325 102 ntBASIC2.85□□□□□ -1.95
SMARCAL1Q9NZC9 RNU6-217P-201ENST00000384164 104 ntBASIC2.85□□□□□ -1.95
SMARCAL1Q9NZC9 RNU6-851P-201ENST00000384565 107 ntBASIC2.85□□□□□ -1.95
SMARCAL1Q9NZC9 MIR128-1-201ENST00000384921 82 ntBASIC2.85□□□□□ -1.95
SMARCAL1Q9NZC9 RPL21P75-201ENST00000396599 483 ntBASIC2.85□□□□□ -1.95
SMARCAL1Q9NZC9 RPL21P28-201ENST00000401418 483 ntBASIC2.85□□□□□ -1.95
SMARCAL1Q9NZC9 RNU4-14P-201ENST00000410858 122 ntBASIC2.85□□□□□ -1.95
SMARCAL1Q9NZC9 EEF1A1P41-201ENST00000414667 207 ntBASIC2.85□□□□□ -1.95
SMARCAL1Q9NZC9 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.85□□□□□ -1.95
SMARCAL1Q9NZC9 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.85□□□□□ -1.95
SMARCAL1Q9NZC9 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.85□□□□□ -1.95
SMARCAL1Q9NZC9 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC2.85□□□□□ -1.95
SMARCAL1Q9NZC9 RPL21P2-201ENST00000440049 481 ntBASIC2.85□□□□□ -1.95
SMARCAL1Q9NZC9 RPL32P28-201ENST00000443577 397 ntBASIC2.85□□□□□ -1.95
SMARCAL1Q9NZC9 Z96811.1-201ENST00000445880 108 ntBASIC2.85□□□□□ -1.95
SMARCAL1Q9NZC9 AL583843.1-201ENST00000456070 346 ntBASIC2.85□□□□□ -1.95
SMARCAL1Q9NZC9 RPL21P39-201ENST00000463605 483 ntBASIC2.85□□□□□ -1.95
SMARCAL1Q9NZC9 S100A11P2-201ENST00000467589 312 ntBASIC2.85□□□□□ -1.95
SMARCAL1Q9NZC9 AC087190.1-201ENST00000484462 480 ntBASIC2.85□□□□□ -1.95
SMARCAL1Q9NZC9 AC093591.1-201ENST00000491435 481 ntBASIC2.85□□□□□ -1.95
SMARCAL1Q9NZC9 RPL21P16-201ENST00000495531 483 ntBASIC2.85□□□□□ -1.95
SMARCAL1Q9NZC9 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC2.85□□□□□ -1.95
SMARCAL1Q9NZC9 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.85□□□□□ -1.95
SMARCAL1Q9NZC9 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.85□□□□□ -1.95
SMARCAL1Q9NZC9 RNU6-928P-201ENST00000516876 104 ntBASIC2.85□□□□□ -1.95
SMARCAL1Q9NZC9 SNORA31.19-201ENST00000517079 126 ntBASIC2.85□□□□□ -1.95
SMARCAL1Q9NZC9 RNA5SP454-201ENST00000517231 127 ntBASIC2.85□□□□□ -1.95
SMARCAL1Q9NZC9 AP005639.2-201ENST00000527592 928 ntBASIC2.85□□□□□ -1.95
SMARCAL1Q9NZC9 CYCSP27-201ENST00000527643 293 ntBASIC2.85□□□□□ -1.95
SMARCAL1Q9NZC9 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms