Protein–RNA interactions for Protein: Q9NXS3

KLHL28, Kelch-like protein 28, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL28Q9NXS3 RNU6-1129P-201ENST00000515964 104 ntBASIC1.83□□□□□ -2.12
KLHL28Q9NXS3 SNORA3.4-201ENST00000515969 96 ntBASIC1.83□□□□□ -2.12
KLHL28Q9NXS3 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC1.83□□□□□ -2.12
KLHL28Q9NXS3 AP003181.2-201ENST00000528941 181 ntBASIC1.83□□□□□ -2.12
KLHL28Q9NXS3 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.83□□□□□ -2.12
KLHL28Q9NXS3 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC1.83□□□□□ -2.12
KLHL28Q9NXS3 MIR548AC-201ENST00000585049 88 ntBASIC1.83□□□□□ -2.12
KLHL28Q9NXS3 SNRPGP17-201ENST00000603780 214 ntBASIC1.83□□□□□ -2.12
KLHL28Q9NXS3 AC025811.1-201ENST00000604312 472 ntBASIC1.83□□□□□ -2.12
KLHL28Q9NXS3 AL158032.1-201ENST00000605401 106 ntBASIC1.83□□□□□ -2.12
KLHL28Q9NXS3 AC009318.2-201ENST00000610917 651 ntBASIC1.83□□□□□ -2.12
KLHL28Q9NXS3 Y_RNA.783-201ENST00000613546 102 ntBASIC1.83□□□□□ -2.12
KLHL28Q9NXS3 AC009159.2-201ENST00000617603 606 ntBASIC1.83□□□□□ -2.12
KLHL28Q9NXS3 U6.42-201ENST00000618440 107 ntBASIC1.83□□□□□ -2.12
KLHL28Q9NXS3 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
KLHL28Q9NXS3 AC009487.4-201ENST00000624969 3585 ntBASIC1.82□□□□□ -2.12
KLHL28Q9NXS3 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.82□□□□□ -2.12
KLHL28Q9NXS3 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
KLHL28Q9NXS3 RNA5SP99-201ENST00000364020 114 ntBASIC1.82□□□□□ -2.12
KLHL28Q9NXS3 RNU6-39P-201ENST00000384344 107 ntBASIC1.82□□□□□ -2.12
KLHL28Q9NXS3 AL031779.1-201ENST00000415663 330 ntBASIC1.82□□□□□ -2.12
KLHL28Q9NXS3 AC114491.1-201ENST00000416095 246 ntBASIC1.82□□□□□ -2.12
KLHL28Q9NXS3 AC244636.1-201ENST00000421152 228 ntBASIC1.82□□□□□ -2.12
KLHL28Q9NXS3 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.82□□□□□ -2.12
KLHL28Q9NXS3 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.82□□□□□ -2.12
KLHL28Q9NXS3 CALM1P1-201ENST00000442082 433 ntBASIC1.82□□□□□ -2.12
KLHL28Q9NXS3 AP001025.1-201ENST00000486139 332 ntBASIC1.82□□□□□ -2.12
KLHL28Q9NXS3 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC1.82□□□□□ -2.12
KLHL28Q9NXS3 AC108078.2-201ENST00000510750 236 ntBASIC1.82□□□□□ -2.12
KLHL28Q9NXS3 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.82□□□□□ -2.12
KLHL28Q9NXS3 AP005639.2-201ENST00000527592 928 ntBASIC1.82□□□□□ -2.12
KLHL28Q9NXS3 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC1.82□□□□□ -2.12
KLHL28Q9NXS3 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC1.82□□□□□ -2.12
KLHL28Q9NXS3 AC002400.1-201ENST00000569310 726 ntBASIC1.82□□□□□ -2.12
KLHL28Q9NXS3 DEFB131E-202ENST00000602581 683 ntBASIC1.82□□□□□ -2.12
KLHL28Q9NXS3 AL139286.2-201ENST00000606838 396 ntBASIC1.82□□□□□ -2.12
KLHL28Q9NXS3 AC087683.2-201ENST00000611384 326 ntBASIC1.82□□□□□ -2.12
KLHL28Q9NXS3 AC138749.5-201ENST00000611461 208 ntBASIC1.82□□□□□ -2.12
KLHL28Q9NXS3 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.82□□□□□ -2.12
KLHL28Q9NXS3 AC116165.2-201ENST00000616705 206 ntBASIC1.82□□□□□ -2.12
KLHL28Q9NXS3 uc_338.20-201ENST00000621563 178 ntBASIC1.82□□□□□ -2.12
KLHL28Q9NXS3 SCARNA4-202ENST00000625402 129 ntBASIC1.82□□□□□ -2.12
KLHL28Q9NXS3 AC008993.2-201ENST00000631744 806 ntBASIC1.82□□□□□ -2.12
KLHL28Q9NXS3 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
KLHL28Q9NXS3 RNU6-529P-201ENST00000363383 104 ntBASIC1.81□□□□□ -2.12
KLHL28Q9NXS3 CISD1P1-201ENST00000393907 327 ntBASIC1.81□□□□□ -2.12
KLHL28Q9NXS3 MRPL42P2-201ENST00000403169 426 ntBASIC1.81□□□□□ -2.12
KLHL28Q9NXS3 MTCYBP36-201ENST00000404146 440 ntBASIC1.81□□□□□ -2.12
KLHL28Q9NXS3 RNU2-48P-201ENST00000410694 191 ntBASIC1.81□□□□□ -2.12
KLHL28Q9NXS3 AL030996.1-201ENST00000411430 235 ntBASIC1.81□□□□□ -2.12
KLHL28Q9NXS3 AL139156.1-201ENST00000412785 841 ntBASIC1.81□□□□□ -2.12
KLHL28Q9NXS3 EIF1AXP1-201ENST00000419267 435 ntBASIC1.81□□□□□ -2.12
KLHL28Q9NXS3 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.81□□□□□ -2.12
KLHL28Q9NXS3 AL445646.1-201ENST00000431784 216 ntBASIC1.81□□□□□ -2.12
KLHL28Q9NXS3 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.81□□□□□ -2.12
KLHL28Q9NXS3 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.81□□□□□ -2.12
KLHL28Q9NXS3 EPS15P1-201ENST00000448836 336 ntBASIC1.81□□□□□ -2.12
KLHL28Q9NXS3 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.81□□□□□ -2.12
KLHL28Q9NXS3 AC006512.1-201ENST00000468816 291 ntBASIC1.81□□□□□ -2.12
KLHL28Q9NXS3 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC1.81□□□□□ -2.12
KLHL28Q9NXS3 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
KLHL28Q9NXS3 RNU6-123P-201ENST00000516163 102 ntBASIC1.81□□□□□ -2.12
KLHL28Q9NXS3 RNU6-548P-201ENST00000517083 115 ntBASIC1.81□□□□□ -2.12
KLHL28Q9NXS3 RNU6-667P-201ENST00000517186 102 ntBASIC1.81□□□□□ -2.12
KLHL28Q9NXS3 SNORA31.23-201ENST00000517219 133 ntBASIC1.81□□□□□ -2.12
KLHL28Q9NXS3 CYCSP27-201ENST00000527643 293 ntBASIC1.81□□□□□ -2.12
KLHL28Q9NXS3 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.81□□□□□ -2.12
KLHL28Q9NXS3 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC1.81□□□□□ -2.12
KLHL28Q9NXS3 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
KLHL28Q9NXS3 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
KLHL28Q9NXS3 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.81□□□□□ -2.12
KLHL28Q9NXS3 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.81□□□□□ -2.12
KLHL28Q9NXS3 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.81□□□□□ -2.12
KLHL28Q9NXS3 AC131159.1-201ENST00000621854 213 ntBASIC1.81□□□□□ -2.12
KLHL28Q9NXS3 AC002543.1-201ENST00000299783 1954 ntBASIC1.81□□□□□ -2.12
KLHL28Q9NXS3 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
KLHL28Q9NXS3 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.8□□□□□ -2.12
KLHL28Q9NXS3 SNORD116-20-201ENST00000384529 92 ntBASIC1.8□□□□□ -2.12
KLHL28Q9NXS3 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC1.8□□□□□ -2.12
KLHL28Q9NXS3 RPL31P63-201ENST00000422565 375 ntBASIC1.8□□□□□ -2.12
KLHL28Q9NXS3 AC007283.2-201ENST00000424739 197 ntBASIC1.8□□□□□ -2.12
KLHL28Q9NXS3 AL589872.1-201ENST00000426602 288 ntBASIC1.8□□□□□ -2.12
KLHL28Q9NXS3 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.8□□□□□ -2.12
KLHL28Q9NXS3 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.8□□□□□ -2.12
KLHL28Q9NXS3 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.8□□□□□ -2.12
KLHL28Q9NXS3 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.8□□□□□ -2.12
KLHL28Q9NXS3 AL451074.3-201ENST00000437709 472 ntBASIC1.8□□□□□ -2.12
KLHL28Q9NXS3 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.8□□□□□ -2.12
KLHL28Q9NXS3 RPS24P1-201ENST00000438550 371 ntBASIC1.8□□□□□ -2.12
KLHL28Q9NXS3 USP9YP15-201ENST00000442391 422 ntBASIC1.8□□□□□ -2.12
KLHL28Q9NXS3 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.8□□□□□ -2.12
KLHL28Q9NXS3 ZNF114P1-201ENST00000453500 292 ntBASIC1.8□□□□□ -2.12
KLHL28Q9NXS3 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC1.8□□□□□ -2.12
KLHL28Q9NXS3 RNU7-125P-201ENST00000458760 62 ntBASIC1.8□□□□□ -2.12
KLHL28Q9NXS3 AL121594.1-201ENST00000475906 575 ntBASIC1.8□□□□□ -2.12
KLHL28Q9NXS3 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC1.8□□□□□ -2.12
KLHL28Q9NXS3 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC1.8□□□□□ -2.12
KLHL28Q9NXS3 MIR5089-201ENST00000580047 84 ntBASIC1.8□□□□□ -2.12
KLHL28Q9NXS3 AC090897.2-201ENST00000581715 130 ntBASIC1.8□□□□□ -2.12
KLHL28Q9NXS3 CLPTM1LP1-201ENST00000604519 484 ntBASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms