Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.05□□□□□ -2.08
RPAP1Q9BWH6 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC2.05□□□□□ -2.08
RPAP1Q9BWH6 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.05□□□□□ -2.08
RPAP1Q9BWH6 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.05□□□□□ -2.08
RPAP1Q9BWH6 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.05□□□□□ -2.08
RPAP1Q9BWH6 AC024940.5-201ENST00000622889 474 ntBASIC2.05□□□□□ -2.08
RPAP1Q9BWH6 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
RPAP1Q9BWH6 AC138393.1-203ENST00000327086 343 ntBASIC2.04□□□□□ -2.08
RPAP1Q9BWH6 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC2.04□□□□□ -2.08
RPAP1Q9BWH6 SNORA75B-201ENST00000384053 137 ntBASIC2.04□□□□□ -2.08
RPAP1Q9BWH6 FTH1P15-201ENST00000406984 280 ntBASIC2.04□□□□□ -2.08
RPAP1Q9BWH6 MIR1302-8-201ENST00000408342 128 ntBASIC2.04□□□□□ -2.08
RPAP1Q9BWH6 AP000275.1-201ENST00000411943 390 ntBASIC2.04□□□□□ -2.08
RPAP1Q9BWH6 AC009518.2-201ENST00000418056 731 ntBASIC2.04□□□□□ -2.08
RPAP1Q9BWH6 AL353621.1-201ENST00000418219 243 ntBASIC2.04□□□□□ -2.08
RPAP1Q9BWH6 AC007283.2-201ENST00000424739 197 ntBASIC2.04□□□□□ -2.08
RPAP1Q9BWH6 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.04□□□□□ -2.08
RPAP1Q9BWH6 RPL7P34-201ENST00000433316 712 ntBASIC2.04□□□□□ -2.08
RPAP1Q9BWH6 AL353706.1-201ENST00000436728 494 ntBASIC2.04□□□□□ -2.08
RPAP1Q9BWH6 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC2.04□□□□□ -2.08
RPAP1Q9BWH6 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.04□□□□□ -2.08
RPAP1Q9BWH6 AC124916.1-201ENST00000444020 547 ntBASIC2.04□□□□□ -2.08
RPAP1Q9BWH6 AL136380.1-201ENST00000447970 162 ntBASIC2.04□□□□□ -2.08
RPAP1Q9BWH6 EPS15P1-201ENST00000448836 336 ntBASIC2.04□□□□□ -2.08
RPAP1Q9BWH6 MTCO2P29-201ENST00000465212 189 ntBASIC2.04□□□□□ -2.08
RPAP1Q9BWH6 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC2.04□□□□□ -2.08
RPAP1Q9BWH6 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC2.04□□□□□ -2.08
RPAP1Q9BWH6 AC025678.1-201ENST00000567861 338 ntBASIC2.04□□□□□ -2.08
RPAP1Q9BWH6 MIR3122-201ENST00000577243 73 ntBASIC2.04□□□□□ -2.08
RPAP1Q9BWH6 AC087045.1-201ENST00000605856 382 ntBASIC2.04□□□□□ -2.08
RPAP1Q9BWH6 AC126118.1-201ENST00000607744 628 ntBASIC2.04□□□□□ -2.08
RPAP1Q9BWH6 RNU6-91P-201ENST00000607774 107 ntBASIC2.04□□□□□ -2.08
RPAP1Q9BWH6 AC138749.5-201ENST00000611461 208 ntBASIC2.04□□□□□ -2.08
RPAP1Q9BWH6 AL359547.2-201ENST00000615810 418 ntBASIC2.04□□□□□ -2.08
RPAP1Q9BWH6 AC116165.2-201ENST00000616705 206 ntBASIC2.04□□□□□ -2.08
RPAP1Q9BWH6 MIR5739-201ENST00000619803 80 ntBASIC2.04□□□□□ -2.08
RPAP1Q9BWH6 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.04□□□□□ -2.08
RPAP1Q9BWH6 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.04□□□□□ -2.08
RPAP1Q9BWH6 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.03□□□□□ -2.08
RPAP1Q9BWH6 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
RPAP1Q9BWH6 RNU5F-7P-201ENST00000363696 115 ntBASIC2.03□□□□□ -2.08
RPAP1Q9BWH6 RNU5E-5P-201ENST00000365379 116 ntBASIC2.03□□□□□ -2.08
RPAP1Q9BWH6 RNU1-148P-201ENST00000384472 162 ntBASIC2.03□□□□□ -2.08
RPAP1Q9BWH6 RN7SKP158-201ENST00000410453 326 ntBASIC2.03□□□□□ -2.08
RPAP1Q9BWH6 AC016831.2-201ENST00000417179 352 ntBASIC2.03□□□□□ -2.08
RPAP1Q9BWH6 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC2.03□□□□□ -2.08
RPAP1Q9BWH6 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC2.03□□□□□ -2.08
RPAP1Q9BWH6 RNA5SP233-201ENST00000459153 113 ntBASIC2.03□□□□□ -2.08
RPAP1Q9BWH6 AP000797.1-201ENST00000478870 387 ntBASIC2.03□□□□□ -2.08
RPAP1Q9BWH6 RPL7P43-201ENST00000478876 753 ntBASIC2.03□□□□□ -2.08
RPAP1Q9BWH6 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.03□□□□□ -2.08
RPAP1Q9BWH6 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC2.03□□□□□ -2.08
RPAP1Q9BWH6 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC2.03□□□□□ -2.08
RPAP1Q9BWH6 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC2.03□□□□□ -2.08
RPAP1Q9BWH6 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC2.03□□□□□ -2.08
RPAP1Q9BWH6 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC2.03□□□□□ -2.08
RPAP1Q9BWH6 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC2.03□□□□□ -2.08
RPAP1Q9BWH6 AC092325.1-201ENST00000566449 554 ntBASIC2.03□□□□□ -2.08
RPAP1Q9BWH6 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC2.03□□□□□ -2.08
RPAP1Q9BWH6 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
RPAP1Q9BWH6 AL158032.1-201ENST00000605401 106 ntBASIC2.03□□□□□ -2.08
RPAP1Q9BWH6 AC068276.1-201ENST00000605793 379 ntBASIC2.03□□□□□ -2.08
RPAP1Q9BWH6 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.03□□□□□ -2.09
RPAP1Q9BWH6 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
RPAP1Q9BWH6 RNU1-72P-201ENST00000362976 153 ntBASIC2.02□□□□□ -2.09
RPAP1Q9BWH6 RNU6-39P-201ENST00000384344 107 ntBASIC2.02□□□□□ -2.09
RPAP1Q9BWH6 RNU2-63P-201ENST00000410792 194 ntBASIC2.02□□□□□ -2.09
RPAP1Q9BWH6 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC2.02□□□□□ -2.09
RPAP1Q9BWH6 AL356583.2-201ENST00000426536 280 ntBASIC2.02□□□□□ -2.09
RPAP1Q9BWH6 AL583843.1-201ENST00000456070 346 ntBASIC2.02□□□□□ -2.09
RPAP1Q9BWH6 RNU6-1129P-201ENST00000515964 104 ntBASIC2.02□□□□□ -2.09
RPAP1Q9BWH6 SNORA31.23-201ENST00000517219 133 ntBASIC2.02□□□□□ -2.09
RPAP1Q9BWH6 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2.02□□□□□ -2.09
RPAP1Q9BWH6 AC022878.1-201ENST00000530684 149 ntBASIC2.02□□□□□ -2.09
RPAP1Q9BWH6 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC2.02□□□□□ -2.09
RPAP1Q9BWH6 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.02□□□□□ -2.09
RPAP1Q9BWH6 MTND1P24-201ENST00000552175 861 ntBASIC2.02□□□□□ -2.09
RPAP1Q9BWH6 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC2.02□□□□□ -2.09
RPAP1Q9BWH6 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.02□□□□□ -2.09
RPAP1Q9BWH6 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.02□□□□□ -2.09
RPAP1Q9BWH6 AC010928.2-201ENST00000588017 287 ntBASIC2.02□□□□□ -2.09
RPAP1Q9BWH6 HMGN1P30-201ENST00000589286 268 ntBASIC2.02□□□□□ -2.09
RPAP1Q9BWH6 CLPTM1LP1-201ENST00000604519 484 ntBASIC2.02□□□□□ -2.09
RPAP1Q9BWH6 AL022154.1-201ENST00000604698 785 ntBASIC2.02□□□□□ -2.09
RPAP1Q9BWH6 AL355297.2-201ENST00000604792 129 ntBASIC2.02□□□□□ -2.09
RPAP1Q9BWH6 AL161423.1-201ENST00000613700 262 ntBASIC2.02□□□□□ -2.09
RPAP1Q9BWH6 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.02□□□□□ -2.09
RPAP1Q9BWH6 AC017037.3-201ENST00000625016 472 ntBASIC2.02□□□□□ -2.09
RPAP1Q9BWH6 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.02□□□□□ -2.09
RPAP1Q9BWH6 Y_RNA.40-201ENST00000362645 93 ntBASIC2.01□□□□□ -2.09
RPAP1Q9BWH6 RNA5SP363-201ENST00000365072 115 ntBASIC2.01□□□□□ -2.09
RPAP1Q9BWH6 AL365338.1-201ENST00000422282 858 ntBASIC2.01□□□□□ -2.09
RPAP1Q9BWH6 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC2.01□□□□□ -2.09
RPAP1Q9BWH6 NDUFA5P4-201ENST00000436704 385 ntBASIC2.01□□□□□ -2.09
RPAP1Q9BWH6 AC016691.1-201ENST00000441321 413 ntBASIC2.01□□□□□ -2.09
RPAP1Q9BWH6 USP9YP12-201ENST00000450481 570 ntBASIC2.01□□□□□ -2.09
RPAP1Q9BWH6 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC2.01□□□□□ -2.09
RPAP1Q9BWH6 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC2.01□□□□□ -2.09
RPAP1Q9BWH6 AC118273.2-201ENST00000532092 465 ntBASIC2.01□□□□□ -2.09
RPAP1Q9BWH6 AC135279.1-201ENST00000543493 504 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms