Protein–RNA interactions for Protein: Q9BWG4

SSBP4, Single-stranded DNA-binding protein 4, humanhuman

Predicted RBP Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4Q9BWG4 U2.21-201ENST00000637295 81 ntBASIC3.82□□□□□ -1.8
SSBP4Q9BWG4 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
SSBP4Q9BWG4 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC3.82□□□□□ -1.8
SSBP4Q9BWG4 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC3.82□□□□□ -1.8
SSBP4Q9BWG4 AC106871.1-201ENST00000568324 3102 ntBASIC3.82□□□□□ -1.8
SSBP4Q9BWG4 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SSBP4Q9BWG4 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
SSBP4Q9BWG4 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.82□□□□□ -1.8
SSBP4Q9BWG4 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
SSBP4Q9BWG4 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SSBP4Q9BWG4 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC3.81□□□□□ -1.8
SSBP4Q9BWG4 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC3.81□□□□□ -1.8
SSBP4Q9BWG4 AC092435.4-201ENST00000623012 4159 ntBASIC3.81□□□□□ -1.8
SSBP4Q9BWG4 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
SSBP4Q9BWG4 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SSBP4Q9BWG4 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SSBP4Q9BWG4 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
SSBP4Q9BWG4 MIR448-201ENST00000362131 111 ntBASIC3.81□□□□□ -1.8
SSBP4Q9BWG4 RNU6-778P-201ENST00000363269 103 ntBASIC3.81□□□□□ -1.8
SSBP4Q9BWG4 RNA5SP232-201ENST00000364144 119 ntBASIC3.81□□□□□ -1.8
SSBP4Q9BWG4 SNORD87-201ENST00000364849 89 ntBASIC3.81□□□□□ -1.8
SSBP4Q9BWG4 RNU6-1080P-201ENST00000383982 107 ntBASIC3.81□□□□□ -1.8
SSBP4Q9BWG4 RNU6-106P-201ENST00000384405 107 ntBASIC3.81□□□□□ -1.8
SSBP4Q9BWG4 MIR325-201ENST00000385260 98 ntBASIC3.81□□□□□ -1.8
SSBP4Q9BWG4 SNORA48.5-201ENST00000391143 135 ntBASIC3.81□□□□□ -1.8
SSBP4Q9BWG4 EI24P2-201ENST00000397776 1076 ntBASIC3.81□□□□□ -1.8
SSBP4Q9BWG4 MIR1275-201ENST00000408770 80 ntBASIC3.81□□□□□ -1.8
SSBP4Q9BWG4 RNA5SP390-201ENST00000410191 113 ntBASIC3.81□□□□□ -1.8
SSBP4Q9BWG4 Y_RNA.617-201ENST00000410920 90 ntBASIC3.81□□□□□ -1.8
SSBP4Q9BWG4 AC099548.1-201ENST00000421443 426 ntBASIC3.81□□□□□ -1.8
SSBP4Q9BWG4 AL139148.1-201ENST00000427122 680 ntBASIC3.81□□□□□ -1.8
SSBP4Q9BWG4 COX6CP13-201ENST00000428703 226 ntBASIC3.81□□□□□ -1.8
SSBP4Q9BWG4 TOMM22P2-201ENST00000430735 237 ntBASIC3.81□□□□□ -1.8
SSBP4Q9BWG4 AC006028.1-201ENST00000438379 402 ntBASIC3.81□□□□□ -1.8
SSBP4Q9BWG4 KRTAP8-2P-201ENST00000440620 186 ntBASIC3.81□□□□□ -1.8
SSBP4Q9BWG4 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC3.81□□□□□ -1.8
SSBP4Q9BWG4 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SSBP4Q9BWG4 AC000111.2-201ENST00000448200 210 ntBASIC3.81□□□□□ -1.8
SSBP4Q9BWG4 RPS29P2-201ENST00000479278 136 ntBASIC3.81□□□□□ -1.8
SSBP4Q9BWG4 RN7SKP19-201ENST00000516016 252 ntBASIC3.81□□□□□ -1.8
SSBP4Q9BWG4 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC3.81□□□□□ -1.8
SSBP4Q9BWG4 AC009163.5-201ENST00000575421 637 ntBASIC3.81□□□□□ -1.8
SSBP4Q9BWG4 AC091178.2-201ENST00000584401 117 ntBASIC3.81□□□□□ -1.8
SSBP4Q9BWG4 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC3.81□□□□□ -1.8
SSBP4Q9BWG4 ARF4P1-201ENST00000605447 541 ntBASIC3.81□□□□□ -1.8
SSBP4Q9BWG4 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC3.81□□□□□ -1.8
SSBP4Q9BWG4 FTX_3.1-201ENST00000610451 147 ntBASIC3.81□□□□□ -1.8
SSBP4Q9BWG4 AC132068.1-201ENST00000623805 459 ntBASIC3.81□□□□□ -1.8
SSBP4Q9BWG4 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SSBP4Q9BWG4 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SSBP4Q9BWG4 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC3.81□□□□□ -1.8
SSBP4Q9BWG4 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.81□□□□□ -1.8
SSBP4Q9BWG4 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SSBP4Q9BWG4 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.81□□□□□ -1.8
SSBP4Q9BWG4 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
SSBP4Q9BWG4 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
SSBP4Q9BWG4 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
SSBP4Q9BWG4 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
SSBP4Q9BWG4 AL596211.1-201ENST00000569873 2277 ntBASIC3.81□□□□□ -1.8
SSBP4Q9BWG4 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.8□□□□□ -1.8
SSBP4Q9BWG4 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SSBP4Q9BWG4 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
SSBP4Q9BWG4 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SSBP4Q9BWG4 RNA5SP433-201ENST00000364491 114 ntBASIC3.8□□□□□ -1.8
SSBP4Q9BWG4 RNU6-1279P-201ENST00000383917 103 ntBASIC3.8□□□□□ -1.8
SSBP4Q9BWG4 SNORD72-201ENST00000390994 80 ntBASIC3.8□□□□□ -1.8
SSBP4Q9BWG4 BMS1P17-202ENST00000416720 316 ntBASIC3.8□□□□□ -1.8
SSBP4Q9BWG4 AC244098.2-201ENST00000422068 99 ntBASIC3.8□□□□□ -1.8
SSBP4Q9BWG4 AL365496.1-201ENST00000426885 215 ntBASIC3.8□□□□□ -1.8
SSBP4Q9BWG4 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC3.8□□□□□ -1.8
SSBP4Q9BWG4 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC3.8□□□□□ -1.8
SSBP4Q9BWG4 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SSBP4Q9BWG4 AL445665.1-202ENST00000452436 324 ntBASIC3.8□□□□□ -1.8
SSBP4Q9BWG4 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SSBP4Q9BWG4 SNRPGP8-201ENST00000454064 226 ntBASIC3.8□□□□□ -1.8
SSBP4Q9BWG4 RN7SL441P-201ENST00000492388 296 ntBASIC3.8□□□□□ -1.8
SSBP4Q9BWG4 ENPP7P9-201ENST00000514456 627 ntBASIC3.8□□□□□ -1.8
SSBP4Q9BWG4 RNA5SP271-201ENST00000516700 88 ntBASIC3.8□□□□□ -1.8
SSBP4Q9BWG4 RNU6-762P-201ENST00000517107 102 ntBASIC3.8□□□□□ -1.8
SSBP4Q9BWG4 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC3.8□□□□□ -1.8
SSBP4Q9BWG4 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
SSBP4Q9BWG4 AC027176.1-201ENST00000560204 514 ntBASIC3.8□□□□□ -1.8
SSBP4Q9BWG4 AC025281.1-201ENST00000567026 265 ntBASIC3.8□□□□□ -1.8
SSBP4Q9BWG4 MIR3923-201ENST00000579521 83 ntBASIC3.8□□□□□ -1.8
SSBP4Q9BWG4 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
SSBP4Q9BWG4 MIR3136-201ENST00000583498 78 ntBASIC3.8□□□□□ -1.8
SSBP4Q9BWG4 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.8□□□□□ -1.8
SSBP4Q9BWG4 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
SSBP4Q9BWG4 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC3.8□□□□□ -1.8
SSBP4Q9BWG4 RPL30P11-203ENST00000598995 310 ntBASIC3.8□□□□□ -1.8
SSBP4Q9BWG4 AC025754.2-201ENST00000606491 432 ntBASIC3.8□□□□□ -1.8
SSBP4Q9BWG4 AC025166.1-201ENST00000612411 163 ntBASIC3.8□□□□□ -1.8
SSBP4Q9BWG4 uc_338.18-201ENST00000615451 175 ntBASIC3.8□□□□□ -1.8
SSBP4Q9BWG4 AC100827.5-201ENST00000615883 426 ntBASIC3.8□□□□□ -1.8
SSBP4Q9BWG4 AL591926.1-201ENST00000620542 217 ntBASIC3.8□□□□□ -1.8
SSBP4Q9BWG4 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC3.8□□□□□ -1.8
SSBP4Q9BWG4 SNORD98-201ENST00000636377 67 ntBASIC3.8□□□□□ -1.8
SSBP4Q9BWG4 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
SSBP4Q9BWG4 Z73965.1-201ENST00000623412 2297 ntBASIC3.8□□□□□ -1.8
SSBP4Q9BWG4 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms