Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 AC009269.6-201ENST00000621778 588 ntBASIC1.17□□□□□ -2.22
UPK3BQ9BT76 AP002371.2-201ENST00000624450 503 ntBASIC1.17□□□□□ -2.22
UPK3BQ9BT76 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.17□□□□□ -2.22
UPK3BQ9BT76 FARSBP1-201ENST00000435808 1778 ntBASIC1.16□□□□□ -2.22
UPK3BQ9BT76 RNU6-1210P-201ENST00000363775 107 ntBASIC1.16□□□□□ -2.22
UPK3BQ9BT76 RNU6-931P-201ENST00000363850 107 ntBASIC1.16□□□□□ -2.22
UPK3BQ9BT76 SNORA75B-201ENST00000384053 137 ntBASIC1.16□□□□□ -2.22
UPK3BQ9BT76 RNU6-622P-201ENST00000384272 103 ntBASIC1.16□□□□□ -2.22
UPK3BQ9BT76 RNU6-72P-201ENST00000384285 79 ntBASIC1.16□□□□□ -2.22
UPK3BQ9BT76 SNORD116-20-201ENST00000384529 92 ntBASIC1.16□□□□□ -2.22
UPK3BQ9BT76 MIR122-201ENST00000385044 85 ntBASIC1.16□□□□□ -2.22
UPK3BQ9BT76 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
UPK3BQ9BT76 CBX3P9-201ENST00000402326 552 ntBASIC1.16□□□□□ -2.22
UPK3BQ9BT76 RNA5SP390-201ENST00000410191 113 ntBASIC1.16□□□□□ -2.22
UPK3BQ9BT76 OR9R1P-201ENST00000412200 877 ntBASIC1.16□□□□□ -2.22
UPK3BQ9BT76 SRIP3-201ENST00000413200 219 ntBASIC1.16□□□□□ -2.22
UPK3BQ9BT76 RPL23AP39-201ENST00000415533 405 ntBASIC1.16□□□□□ -2.22
UPK3BQ9BT76 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC1.16□□□□□ -2.22
UPK3BQ9BT76 AL365400.1-201ENST00000431854 640 ntBASIC1.16□□□□□ -2.22
UPK3BQ9BT76 MTCO3P5-201ENST00000433620 714 ntBASIC1.16□□□□□ -2.22
UPK3BQ9BT76 AC084290.1-201ENST00000434995 374 ntBASIC1.16□□□□□ -2.22
UPK3BQ9BT76 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC1.16□□□□□ -2.22
UPK3BQ9BT76 AC006026.2-201ENST00000457376 180 ntBASIC1.16□□□□□ -2.22
UPK3BQ9BT76 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.16□□□□□ -2.22
UPK3BQ9BT76 AC116347.2-201ENST00000514912 523 ntBASIC1.16□□□□□ -2.22
UPK3BQ9BT76 RNU6-991P-201ENST00000516168 107 ntBASIC1.16□□□□□ -2.22
UPK3BQ9BT76 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.16□□□□□ -2.22
UPK3BQ9BT76 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC1.16□□□□□ -2.22
UPK3BQ9BT76 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.16□□□□□ -2.22
UPK3BQ9BT76 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC1.16□□□□□ -2.22
UPK3BQ9BT76 AL022154.1-201ENST00000604698 785 ntBASIC1.16□□□□□ -2.22
UPK3BQ9BT76 Z82243.1-201ENST00000609432 473 ntBASIC1.16□□□□□ -2.22
UPK3BQ9BT76 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
UPK3BQ9BT76 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.16□□□□□ -2.22
UPK3BQ9BT76 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
UPK3BQ9BT76 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.22
UPK3BQ9BT76 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
UPK3BQ9BT76 RNU1-17P-201ENST00000363022 152 ntBASIC1.15□□□□□ -2.23
UPK3BQ9BT76 RNU6-157P-201ENST00000383957 107 ntBASIC1.15□□□□□ -2.23
UPK3BQ9BT76 MIR10A-201ENST00000385043 110 ntBASIC1.15□□□□□ -2.23
UPK3BQ9BT76 CISD1P1-201ENST00000393907 327 ntBASIC1.15□□□□□ -2.23
UPK3BQ9BT76 RNU2-23P-201ENST00000410545 195 ntBASIC1.15□□□□□ -2.23
UPK3BQ9BT76 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC1.15□□□□□ -2.23
UPK3BQ9BT76 USP9YP18-201ENST00000425912 695 ntBASIC1.15□□□□□ -2.23
UPK3BQ9BT76 AL360221.1-201ENST00000445989 335 ntBASIC1.15□□□□□ -2.23
UPK3BQ9BT76 NDUFB1P2-201ENST00000449477 176 ntBASIC1.15□□□□□ -2.23
UPK3BQ9BT76 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.15□□□□□ -2.23
UPK3BQ9BT76 AC008834.1-201ENST00000511612 175 ntBASIC1.15□□□□□ -2.23
UPK3BQ9BT76 RNA5SP458-201ENST00000516188 119 ntBASIC1.15□□□□□ -2.23
UPK3BQ9BT76 RNU7-51P-201ENST00000516560 62 ntBASIC1.15□□□□□ -2.23
UPK3BQ9BT76 SNORA44.1-201ENST00000517031 108 ntBASIC1.15□□□□□ -2.23
UPK3BQ9BT76 RN7SKP256-201ENST00000517201 314 ntBASIC1.15□□□□□ -2.23
UPK3BQ9BT76 AC107934.1-201ENST00000522215 217 ntBASIC1.15□□□□□ -2.23
UPK3BQ9BT76 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.15□□□□□ -2.23
UPK3BQ9BT76 AC022254.1-201ENST00000567857 235 ntBASIC1.15□□□□□ -2.23
UPK3BQ9BT76 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC1.15□□□□□ -2.23
UPK3BQ9BT76 AC104581.2-201ENST00000572227 430 ntBASIC1.15□□□□□ -2.23
UPK3BQ9BT76 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC1.15□□□□□ -2.23
UPK3BQ9BT76 AL138889.2-201ENST00000603883 242 ntBASIC1.15□□□□□ -2.23
UPK3BQ9BT76 AL158032.1-201ENST00000605401 106 ntBASIC1.15□□□□□ -2.23
UPK3BQ9BT76 AC103810.8-201ENST00000607347 118 ntBASIC1.15□□□□□ -2.23
UPK3BQ9BT76 AC007792.1-201ENST00000623023 402 ntBASIC1.15□□□□□ -2.23
UPK3BQ9BT76 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC1.15□□□□□ -2.23
UPK3BQ9BT76 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.15□□□□□ -2.23
UPK3BQ9BT76 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC1.15□□□□□ -2.23
UPK3BQ9BT76 AL445523.1-201ENST00000451184 1362 ntBASIC1.15□□□□□ -2.23
UPK3BQ9BT76 ZNF876P-202ENST00000398732 1485 ntBASIC1.15□□□□□ -2.23
UPK3BQ9BT76 AC073343.1-201ENST00000328239 651 ntBASIC1.14□□□□□ -2.23
UPK3BQ9BT76 RNU1-58P-201ENST00000362413 163 ntBASIC1.14□□□□□ -2.23
UPK3BQ9BT76 RNU6-212P-201ENST00000362642 104 ntBASIC1.14□□□□□ -2.23
UPK3BQ9BT76 Y_RNA.302-201ENST00000364997 102 ntBASIC1.14□□□□□ -2.23
UPK3BQ9BT76 MIR597-201ENST00000384968 97 ntBASIC1.14□□□□□ -2.23
UPK3BQ9BT76 MIR29B2-201ENST00000385055 81 ntBASIC1.14□□□□□ -2.23
UPK3BQ9BT76 BTF3L4P2-201ENST00000392798 346 ntBASIC1.14□□□□□ -2.23
UPK3BQ9BT76 MIR934-201ENST00000401241 83 ntBASIC1.14□□□□□ -2.23
UPK3BQ9BT76 RNA5SP501-201ENST00000410990 112 ntBASIC1.14□□□□□ -2.23
UPK3BQ9BT76 AC074117.2-201ENST00000417130 397 ntBASIC1.14□□□□□ -2.23
UPK3BQ9BT76 RPS15AP12-201ENST00000419498 388 ntBASIC1.14□□□□□ -2.23
UPK3BQ9BT76 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC1.14□□□□□ -2.23
UPK3BQ9BT76 MTND1P20-201ENST00000430341 950 ntBASIC1.14□□□□□ -2.23
UPK3BQ9BT76 CALM1P1-201ENST00000442082 433 ntBASIC1.14□□□□□ -2.23
UPK3BQ9BT76 AL357134.1-201ENST00000445848 426 ntBASIC1.14□□□□□ -2.23
UPK3BQ9BT76 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC1.14□□□□□ -2.23
UPK3BQ9BT76 AP001025.1-201ENST00000486139 332 ntBASIC1.14□□□□□ -2.23
UPK3BQ9BT76 RNU6-965P-201ENST00000516721 96 ntBASIC1.14□□□□□ -2.23
UPK3BQ9BT76 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.14□□□□□ -2.23
UPK3BQ9BT76 AP003122.4-201ENST00000530980 758 ntBASIC1.14□□□□□ -2.23
UPK3BQ9BT76 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC1.14□□□□□ -2.23
UPK3BQ9BT76 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC1.14□□□□□ -2.23
UPK3BQ9BT76 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC1.14□□□□□ -2.23
UPK3BQ9BT76 AC013244.3-201ENST00000605614 388 ntBASIC1.14□□□□□ -2.23
UPK3BQ9BT76 AL139022.2-201ENST00000606934 443 ntBASIC1.14□□□□□ -2.23
UPK3BQ9BT76 AL445984.1-201ENST00000637834 659 ntBASIC1.14□□□□□ -2.23
UPK3BQ9BT76 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.14□□□□□ -2.23
UPK3BQ9BT76 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
UPK3BQ9BT76 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.14□□□□□ -2.23
UPK3BQ9BT76 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.13□□□□□ -2.23
UPK3BQ9BT76 MIR126-201ENST00000362291 85 ntBASIC1.13□□□□□ -2.23
UPK3BQ9BT76 Y_RNA.18-201ENST00000362461 102 ntBASIC1.13□□□□□ -2.23
UPK3BQ9BT76 RNA5SP99-201ENST00000364020 114 ntBASIC1.13□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms