Protein–RNA interactions for Protein: Q96NT0

CCDC115, Coiled-coil domain-containing protein 115, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC115Q96NT0 MRPL35P1-201ENST00000404272 572 ntBASIC0.7□□□□□ -2.3
CCDC115Q96NT0 DPRXP1-201ENST00000426312 460 ntBASIC0.7□□□□□ -2.3
CCDC115Q96NT0 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC0.7□□□□□ -2.3
CCDC115Q96NT0 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC0.7□□□□□ -2.3
CCDC115Q96NT0 RPL31P3-201ENST00000458430 332 ntBASIC0.7□□□□□ -2.3
CCDC115Q96NT0 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC0.7□□□□□ -2.3
CCDC115Q96NT0 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
CCDC115Q96NT0 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC0.7□□□□□ -2.3
CCDC115Q96NT0 RNU6-965P-201ENST00000516721 96 ntBASIC0.7□□□□□ -2.3
CCDC115Q96NT0 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC0.7□□□□□ -2.3
CCDC115Q96NT0 AP001981.2-201ENST00000603241 418 ntBASIC0.7□□□□□ -2.3
CCDC115Q96NT0 KATNBL1P5-201ENST00000605015 517 ntBASIC0.7□□□□□ -2.3
CCDC115Q96NT0 AC100814.1-201ENST00000606963 623 ntBASIC0.7□□□□□ -2.3
CCDC115Q96NT0 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC0.7□□□□□ -2.3
CCDC115Q96NT0 MIR8070-201ENST00000616510 88 ntBASIC0.7□□□□□ -2.3
CCDC115Q96NT0 AC027335.2-201ENST00000624030 375 ntBASIC0.7□□□□□ -2.3
CCDC115Q96NT0 MIR6767-201ENST00000637302 66 ntBASIC0.7□□□□□ -2.3
CCDC115Q96NT0 AC107982.1-201ENST00000507171 1300 ntBASIC0.69□□□□□ -2.3
CCDC115Q96NT0 AC092447.10-201ENST00000620607 1652 ntBASIC0.69□□□□□ -2.3
CCDC115Q96NT0 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
CCDC115Q96NT0 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
CCDC115Q96NT0 RNU6-655P-201ENST00000362858 107 ntBASIC0.69□□□□□ -2.3
CCDC115Q96NT0 RNU6-944P-201ENST00000364023 107 ntBASIC0.69□□□□□ -2.3
CCDC115Q96NT0 SNORA25.9-201ENST00000365087 128 ntBASIC0.69□□□□□ -2.3
CCDC115Q96NT0 RNU6-883P-201ENST00000384597 107 ntBASIC0.69□□□□□ -2.3
CCDC115Q96NT0 MIR29B2-201ENST00000385055 81 ntBASIC0.69□□□□□ -2.3
CCDC115Q96NT0 MIR1276-201ENST00000408707 83 ntBASIC0.69□□□□□ -2.3
CCDC115Q96NT0 RNU4-27P-201ENST00000410889 139 ntBASIC0.69□□□□□ -2.3
CCDC115Q96NT0 RPL21P24-201ENST00000413752 448 ntBASIC0.69□□□□□ -2.3
CCDC115Q96NT0 AC027644.1-201ENST00000419595 298 ntBASIC0.69□□□□□ -2.3
CCDC115Q96NT0 AC245047.4-201ENST00000433189 144 ntBASIC0.69□□□□□ -2.3
CCDC115Q96NT0 MTND2P20-201ENST00000440805 661 ntBASIC0.69□□□□□ -2.3
CCDC115Q96NT0 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC0.69□□□□□ -2.3
CCDC115Q96NT0 MTND1P18-201ENST00000448191 573 ntBASIC0.69□□□□□ -2.3
CCDC115Q96NT0 OR2AQ1P-201ENST00000451972 200 ntBASIC0.69□□□□□ -2.3
CCDC115Q96NT0 RPL9P9-202ENST00000466501 579 ntBASIC0.69□□□□□ -2.3
CCDC115Q96NT0 LAMTOR3P2-201ENST00000504479 232 ntBASIC0.69□□□□□ -2.3
CCDC115Q96NT0 RNU6-551P-201ENST00000516661 103 ntBASIC0.69□□□□□ -2.3
CCDC115Q96NT0 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC0.69□□□□□ -2.3
CCDC115Q96NT0 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.69□□□□□ -2.3
CCDC115Q96NT0 MIR4653-201ENST00000585107 83 ntBASIC0.69□□□□□ -2.3
CCDC115Q96NT0 VN1R83P-201ENST00000595685 445 ntBASIC0.69□□□□□ -2.3
CCDC115Q96NT0 BX284668.6-201ENST00000606899 438 ntBASIC0.69□□□□□ -2.3
CCDC115Q96NT0 AC108706.1-201ENST00000611053 297 ntBASIC0.69□□□□□ -2.3
CCDC115Q96NT0 AL021879.1-201ENST00000611756 288 ntBASIC0.69□□□□□ -2.3
CCDC115Q96NT0 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC0.69□□□□□ -2.3
CCDC115Q96NT0 AC068205.3-201ENST00000636385 468 ntBASIC0.69□□□□□ -2.3
CCDC115Q96NT0 SNORA25-201ENST00000384384 134 ntBASIC0.68□□□□□ -2.3
CCDC115Q96NT0 RNU6-296P-201ENST00000384608 107 ntBASIC0.68□□□□□ -2.3
CCDC115Q96NT0 FTH1P15-201ENST00000406984 280 ntBASIC0.68□□□□□ -2.3
CCDC115Q96NT0 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.68□□□□□ -2.3
CCDC115Q96NT0 HMGN1P14-201ENST00000412459 517 ntBASIC0.68□□□□□ -2.3
CCDC115Q96NT0 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.68□□□□□ -2.3
CCDC115Q96NT0 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC0.68□□□□□ -2.3
CCDC115Q96NT0 AC004941.2-201ENST00000427009 228 ntBASIC0.68□□□□□ -2.3
CCDC115Q96NT0 TRIM60P13-201ENST00000432350 1283 ntBASIC0.68□□□□□ -2.3
CCDC115Q96NT0 MTCYBP15-201ENST00000433123 1127 ntBASIC0.68□□□□□ -2.3
CCDC115Q96NT0 MTND2P4-201ENST00000445034 1004 ntBASIC0.68□□□□□ -2.3
CCDC115Q96NT0 TAF9P1-201ENST00000445421 515 ntBASIC0.68□□□□□ -2.3
CCDC115Q96NT0 TAF9P2-201ENST00000454958 515 ntBASIC0.68□□□□□ -2.3
CCDC115Q96NT0 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC0.68□□□□□ -2.3
CCDC115Q96NT0 AL163195.1-201ENST00000496941 348 ntBASIC0.68□□□□□ -2.3
CCDC115Q96NT0 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC0.68□□□□□ -2.3
CCDC115Q96NT0 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.68□□□□□ -2.3
CCDC115Q96NT0 ZKSCAN7P1-201ENST00000543668 673 ntBASIC0.68□□□□□ -2.3
CCDC115Q96NT0 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC0.68□□□□□ -2.3
CCDC115Q96NT0 OR6C7P-201ENST00000547875 934 ntBASIC0.68□□□□□ -2.3
CCDC115Q96NT0 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC0.68□□□□□ -2.3
CCDC115Q96NT0 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC0.68□□□□□ -2.3
CCDC115Q96NT0 AC109446.2-201ENST00000567872 497 ntBASIC0.68□□□□□ -2.3
CCDC115Q96NT0 AC136618.2-201ENST00000575091 400 ntBASIC0.68□□□□□ -2.3
CCDC115Q96NT0 MIR4789-201ENST00000577469 82 ntBASIC0.68□□□□□ -2.3
CCDC115Q96NT0 AC021171.1-201ENST00000603137 706 ntBASIC0.68□□□□□ -2.3
CCDC115Q96NT0 AC136443.5-201ENST00000603741 370 ntBASIC0.68□□□□□ -2.3
CCDC115Q96NT0 MIR6504-201ENST00000613520 61 ntBASIC0.68□□□□□ -2.3
CCDC115Q96NT0 AL157770.1-201ENST00000623049 439 ntBASIC0.68□□□□□ -2.3
CCDC115Q96NT0 PLD1-217ENST00000627725 174 ntTSL 5 BASIC0.68□□□□□ -2.3
CCDC115Q96NT0 MIR3529-201ENST00000637713 78 ntBASIC0.68□□□□□ -2.3
CCDC115Q96NT0 OR4G1P-203ENST00000641984 1631 ntBASIC0.67□□□□□ -2.3
CCDC115Q96NT0 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.67□□□□□ -2.3
CCDC115Q96NT0 MIR96-201ENST00000362288 78 ntBASIC0.67□□□□□ -2.3
CCDC115Q96NT0 RNU1-93P-201ENST00000364704 169 ntBASIC0.67□□□□□ -2.3
CCDC115Q96NT0 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
CCDC115Q96NT0 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
CCDC115Q96NT0 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
CCDC115Q96NT0 RPL23AP32-201ENST00000395315 459 ntBASIC0.67□□□□□ -2.3
CCDC115Q96NT0 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
CCDC115Q96NT0 EBAG9P1-201ENST00000418955 543 ntBASIC0.67□□□□□ -2.3
CCDC115Q96NT0 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.67□□□□□ -2.3
CCDC115Q96NT0 PIGFP2-201ENST00000421400 651 ntBASIC0.67□□□□□ -2.3
CCDC115Q96NT0 C8orf59P1-201ENST00000429930 303 ntBASIC0.67□□□□□ -2.3
CCDC115Q96NT0 SEPT7P5-201ENST00000434048 306 ntBASIC0.67□□□□□ -2.3
CCDC115Q96NT0 MTND5P15-201ENST00000434246 349 ntBASIC0.67□□□□□ -2.3
CCDC115Q96NT0 RPL30P6-201ENST00000475925 342 ntBASIC0.67□□□□□ -2.3
CCDC115Q96NT0 AC104629.1-201ENST00000494226 508 ntBASIC0.67□□□□□ -2.3
CCDC115Q96NT0 AC034244.1-201ENST00000507687 207 ntBASIC0.67□□□□□ -2.3
CCDC115Q96NT0 SCARNA16.2-201ENST00000516520 172 ntBASIC0.67□□□□□ -2.3
CCDC115Q96NT0 RNU6-572P-201ENST00000516724 80 ntBASIC0.67□□□□□ -2.3
CCDC115Q96NT0 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC0.67□□□□□ -2.3
CCDC115Q96NT0 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC0.67□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms