Protein–RNA interactions for Protein: Q96LX7

CCDC17, Coiled-coil domain-containing protein 17, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17Q96LX7 AL355596.1-201ENST00000565399 3996 ntBASIC3.33□□□□□ -1.88
CCDC17Q96LX7 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CCDC17Q96LX7 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CCDC17Q96LX7 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
CCDC17Q96LX7 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CCDC17Q96LX7 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CCDC17Q96LX7 Y_RNA.31-201ENST00000362574 102 ntBASIC3.32□□□□□ -1.88
CCDC17Q96LX7 RNU1-35P-201ENST00000362782 153 ntBASIC3.32□□□□□ -1.88
CCDC17Q96LX7 SNORD3E-201ENST00000362899 217 ntBASIC3.32□□□□□ -1.88
CCDC17Q96LX7 Y_RNA.128-201ENST00000363391 112 ntBASIC3.32□□□□□ -1.88
CCDC17Q96LX7 Y_RNA.187-201ENST00000363918 113 ntBASIC3.32□□□□□ -1.88
CCDC17Q96LX7 MIR559-201ENST00000385188 96 ntBASIC3.32□□□□□ -1.88
CCDC17Q96LX7 MIR9-1-201ENST00000385198 89 ntBASIC3.32□□□□□ -1.88
CCDC17Q96LX7 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CCDC17Q96LX7 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.32□□□□□ -1.88
CCDC17Q96LX7 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.32□□□□□ -1.88
CCDC17Q96LX7 AC007919.1-201ENST00000429380 217 ntBASIC3.32□□□□□ -1.88
CCDC17Q96LX7 HMGB1P9-201ENST00000429856 646 ntBASIC3.32□□□□□ -1.88
CCDC17Q96LX7 SNAP23P1-201ENST00000433229 246 ntBASIC3.32□□□□□ -1.88
CCDC17Q96LX7 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.32□□□□□ -1.88
CCDC17Q96LX7 CECR9-201ENST00000453421 199 ntBASIC3.32□□□□□ -1.88
CCDC17Q96LX7 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.32□□□□□ -1.88
CCDC17Q96LX7 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.32□□□□□ -1.88
CCDC17Q96LX7 RPL21P104-201ENST00000464143 478 ntBASIC3.32□□□□□ -1.88
CCDC17Q96LX7 AL160314.1-201ENST00000490836 438 ntBASIC3.32□□□□□ -1.88
CCDC17Q96LX7 AC139453.3-201ENST00000493276 369 ntBASIC3.32□□□□□ -1.88
CCDC17Q96LX7 AC008716.1-201ENST00000511084 513 ntBASIC3.32□□□□□ -1.88
CCDC17Q96LX7 RNU6-1170P-201ENST00000515974 106 ntBASIC3.32□□□□□ -1.88
CCDC17Q96LX7 RNU6-143P-201ENST00000516942 93 ntBASIC3.32□□□□□ -1.88
CCDC17Q96LX7 AC087854.1-201ENST00000519706 414 ntBASIC3.32□□□□□ -1.88
CCDC17Q96LX7 AP003122.3-201ENST00000526316 255 ntBASIC3.32□□□□□ -1.88
CCDC17Q96LX7 AC084851.1-201ENST00000529105 249 ntBASIC3.32□□□□□ -1.88
CCDC17Q96LX7 AC079600.2-201ENST00000550076 130 ntBASIC3.32□□□□□ -1.88
CCDC17Q96LX7 AC026371.1-201ENST00000551867 419 ntBASIC3.32□□□□□ -1.88
CCDC17Q96LX7 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.32□□□□□ -1.88
CCDC17Q96LX7 LRRC37A5P-203ENST00000580181 585 ntBASIC3.32□□□□□ -1.88
CCDC17Q96LX7 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.32□□□□□ -1.88
CCDC17Q96LX7 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.32□□□□□ -1.88
CCDC17Q96LX7 MIR4672-201ENST00000583126 81 ntBASIC3.32□□□□□ -1.88
CCDC17Q96LX7 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.32□□□□□ -1.88
CCDC17Q96LX7 NUTF2P8-201ENST00000604593 363 ntBASIC3.32□□□□□ -1.88
CCDC17Q96LX7 PART1_1.1-201ENST00000611761 217 ntBASIC3.32□□□□□ -1.88
CCDC17Q96LX7 MIR6128-201ENST00000615528 109 ntBASIC3.32□□□□□ -1.88
CCDC17Q96LX7 AC098657.3-201ENST00000620434 263 ntBASIC3.32□□□□□ -1.88
CCDC17Q96LX7 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CCDC17Q96LX7 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.32□□□□□ -1.88
CCDC17Q96LX7 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.32□□□□□ -1.88
CCDC17Q96LX7 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.31□□□□□ -1.88
CCDC17Q96LX7 RNU6-128P-201ENST00000383976 107 ntBASIC3.31□□□□□ -1.88
CCDC17Q96LX7 Y_RNA.480-201ENST00000384364 102 ntBASIC3.31□□□□□ -1.88
CCDC17Q96LX7 RNU6-692P-201ENST00000384496 107 ntBASIC3.31□□□□□ -1.88
CCDC17Q96LX7 RNU6-601P-201ENST00000384540 107 ntBASIC3.31□□□□□ -1.88
CCDC17Q96LX7 MIR512-1-201ENST00000384913 84 ntBASIC3.31□□□□□ -1.88
CCDC17Q96LX7 MIR548P-201ENST00000408336 84 ntBASIC3.31□□□□□ -1.88
CCDC17Q96LX7 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.31□□□□□ -1.88
CCDC17Q96LX7 RPS15AP6-201ENST00000420703 385 ntBASIC3.31□□□□□ -1.88
CCDC17Q96LX7 UBE2D3P2-201ENST00000424409 445 ntBASIC3.31□□□□□ -1.88
CCDC17Q96LX7 AC063976.3-201ENST00000426849 329 ntBASIC3.31□□□□□ -1.88
CCDC17Q96LX7 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC17Q96LX7 HMGB1P12-201ENST00000438594 598 ntBASIC3.31□□□□□ -1.88
CCDC17Q96LX7 PIGFP3-201ENST00000441918 722 ntBASIC3.31□□□□□ -1.88
CCDC17Q96LX7 AL359672.1-201ENST00000442302 409 ntBASIC3.31□□□□□ -1.88
CCDC17Q96LX7 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC17Q96LX7 KC877373.1-201ENST00000479066 408 ntBASIC3.31□□□□□ -1.88
CCDC17Q96LX7 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC17Q96LX7 AC068657.1-201ENST00000520807 306 ntBASIC3.31□□□□□ -1.88
CCDC17Q96LX7 AL157871.3-201ENST00000557231 293 ntBASIC3.31□□□□□ -1.88
CCDC17Q96LX7 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC17Q96LX7 AC078795.3-201ENST00000602913 472 ntBASIC3.31□□□□□ -1.88
CCDC17Q96LX7 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.31□□□□□ -1.88
CCDC17Q96LX7 AC107294.1-201ENST00000609524 467 ntBASIC3.31□□□□□ -1.88
CCDC17Q96LX7 AC090115.4-201ENST00000609970 188 ntBASIC3.31□□□□□ -1.88
CCDC17Q96LX7 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.31□□□□□ -1.88
CCDC17Q96LX7 AC244517.12-201ENST00000623581 663 ntBASIC3.31□□□□□ -1.88
CCDC17Q96LX7 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CCDC17Q96LX7 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
CCDC17Q96LX7 AC062016.1-201ENST00000355719 319 ntBASIC3.3□□□□□ -1.88
CCDC17Q96LX7 Y_RNA.197-201ENST00000364004 102 ntBASIC3.3□□□□□ -1.88
CCDC17Q96LX7 Y_RNA.245-201ENST00000364493 95 ntBASIC3.3□□□□□ -1.88
CCDC17Q96LX7 RNU6-384P-201ENST00000364900 104 ntBASIC3.3□□□□□ -1.88
CCDC17Q96LX7 Y_RNA.324-201ENST00000365165 102 ntBASIC3.3□□□□□ -1.88
CCDC17Q96LX7 Y_RNA.395-201ENST00000383945 109 ntBASIC3.3□□□□□ -1.88
CCDC17Q96LX7 RNU6-310P-201ENST00000384655 107 ntBASIC3.3□□□□□ -1.88
CCDC17Q96LX7 MIR301A-201ENST00000385261 86 ntBASIC3.3□□□□□ -1.88
CCDC17Q96LX7 SNORD73A-201ENST00000386062 65 ntBASIC3.3□□□□□ -1.88
CCDC17Q96LX7 Y_RNA.646-201ENST00000410980 101 ntBASIC3.3□□□□□ -1.88
CCDC17Q96LX7 RNU2-71P-201ENST00000411395 189 ntBASIC3.3□□□□□ -1.88
CCDC17Q96LX7 AL592148.1-201ENST00000413568 445 ntBASIC3.3□□□□□ -1.88
CCDC17Q96LX7 ATG3P1-201ENST00000419507 911 ntBASIC3.3□□□□□ -1.88
CCDC17Q96LX7 NUP35P1-201ENST00000422734 947 ntBASIC3.3□□□□□ -1.88
CCDC17Q96LX7 MYL8P-204ENST00000431574 518 ntBASIC3.3□□□□□ -1.88
CCDC17Q96LX7 GPM6BP2-201ENST00000432046 144 ntBASIC3.3□□□□□ -1.88
CCDC17Q96LX7 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.3□□□□□ -1.88
CCDC17Q96LX7 GPM6BP1-201ENST00000446387 144 ntBASIC3.3□□□□□ -1.88
CCDC17Q96LX7 ELOCP24-201ENST00000456370 334 ntBASIC3.3□□□□□ -1.88
CCDC17Q96LX7 RPL30P15-201ENST00000457129 321 ntBASIC3.3□□□□□ -1.88
CCDC17Q96LX7 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.3□□□□□ -1.88
CCDC17Q96LX7 AC026782.1-201ENST00000512952 449 ntBASIC3.3□□□□□ -1.88
CCDC17Q96LX7 AC009902.1-201ENST00000519351 183 ntBASIC3.3□□□□□ -1.88
CCDC17Q96LX7 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms