Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC-0.05□□□□□ -2.42
USP9XQ93008 MRPL42P4-201ENST00000453267 443 ntBASIC-0.05□□□□□ -2.42
USP9XQ93008 SNORD54-201ENST00000459159 67 ntBASIC-0.05□□□□□ -2.42
USP9XQ93008 snoU13.28-201ENST00000459235 104 ntBASIC-0.05□□□□□ -2.42
USP9XQ93008 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC-0.05□□□□□ -2.42
USP9XQ93008 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC-0.05□□□□□ -2.42
USP9XQ93008 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC-0.05□□□□□ -2.42
USP9XQ93008 AC069304.3-201ENST00000603938 1084 ntBASIC-0.05□□□□□ -2.42
USP9XQ93008 AC040896.1-201ENST00000613819 479 ntBASIC-0.05□□□□□ -2.42
USP9XQ93008 Y_RNA.778-201ENST00000620203 90 ntBASIC-0.05□□□□□ -2.42
USP9XQ93008 AP000943.4-201ENST00000622912 357 ntBASIC-0.05□□□□□ -2.42
USP9XQ93008 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC-0.05□□□□□ -2.42
USP9XQ93008 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC-0.05□□□□□ -2.42
USP9XQ93008 RNU6-370P-201ENST00000411008 104 ntBASIC-0.05□□□□□ -2.42
USP9XQ93008 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC-0.05□□□□□ -2.42
USP9XQ93008 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC-0.05□□□□□ -2.42
USP9XQ93008 AC091874.1-201ENST00000511402 339 ntBASIC-0.05□□□□□ -2.42
USP9XQ93008 RNA5SP180-201ENST00000516181 101 ntBASIC-0.05□□□□□ -2.42
USP9XQ93008 RNU2-12P-201ENST00000517216 168 ntBASIC-0.05□□□□□ -2.42
USP9XQ93008 AL355877.2-201ENST00000603670 358 ntBASIC-0.05□□□□□ -2.42
USP9XQ93008 AC092106.3-201ENST00000611308 722 ntBASIC-0.05□□□□□ -2.42
USP9XQ93008 AC131280.1-202ENST00000624067 4211 ntBASIC-0.06□□□□□ -2.42
USP9XQ93008 RNA5SP264-201ENST00000363115 107 ntBASIC-0.06□□□□□ -2.42
USP9XQ93008 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.06□□□□□ -2.42
USP9XQ93008 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC-0.06□□□□□ -2.42
USP9XQ93008 AC109327.2-201ENST00000448339 378 ntBASIC-0.06□□□□□ -2.42
USP9XQ93008 AC007363.1-201ENST00000604736 620 ntBASIC-0.06□□□□□ -2.42
USP9XQ93008 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC-0.06□□□□□ -2.42
USP9XQ93008 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC-0.06□□□□□ -2.42
USP9XQ93008 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC-0.06□□□□□ -2.42
USP9XQ93008 AC010615.1-201ENST00000594254 1764 ntBASIC-0.06□□□□□ -2.42
USP9XQ93008 RNU6-952P-201ENST00000391164 108 ntBASIC-0.06□□□□□ -2.42
USP9XQ93008 AL049545.1-201ENST00000401856 572 ntBASIC-0.06□□□□□ -2.42
USP9XQ93008 SNORD75.1-201ENST00000408373 60 ntBASIC-0.06□□□□□ -2.42
USP9XQ93008 AC096531.1-201ENST00000419107 107 ntBASIC-0.06□□□□□ -2.42
USP9XQ93008 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC-0.06□□□□□ -2.42
USP9XQ93008 MTCYBP24-201ENST00000420387 1106 ntBASIC-0.06□□□□□ -2.42
USP9XQ93008 AC092423.1-201ENST00000430165 186 ntBASIC-0.06□□□□□ -2.42
USP9XQ93008 snoU13.4-201ENST00000458916 104 ntBASIC-0.06□□□□□ -2.42
USP9XQ93008 AL049874.1-201ENST00000489560 388 ntBASIC-0.06□□□□□ -2.42
USP9XQ93008 RNY4-201ENST00000516507 96 ntBASIC-0.06□□□□□ -2.42
USP9XQ93008 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC-0.06□□□□□ -2.42
USP9XQ93008 AC125611.1-201ENST00000549563 229 ntBASIC-0.06□□□□□ -2.42
USP9XQ93008 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC-0.06□□□□□ -2.42
USP9XQ93008 RN7SL660P-201ENST00000614852 299 ntBASIC-0.06□□□□□ -2.42
USP9XQ93008 MIR424-201ENST00000362227 98 ntBASIC-0.07□□□□□ -2.42
USP9XQ93008 Y_RNA.311-201ENST00000365068 96 ntBASIC-0.07□□□□□ -2.42
USP9XQ93008 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC-0.07□□□□□ -2.42
USP9XQ93008 Y_RNA.421-201ENST00000384052 101 ntBASIC-0.07□□□□□ -2.42
USP9XQ93008 RPS26P5-201ENST00000418544 335 ntBASIC-0.07□□□□□ -2.42
USP9XQ93008 MTCO2P12-201ENST00000427426 682 ntBASIC-0.07□□□□□ -2.42
USP9XQ93008 SNORA4.4-201ENST00000515921 135 ntBASIC-0.07□□□□□ -2.42
USP9XQ93008 RNA5SP255-201ENST00000516370 107 ntBASIC-0.07□□□□□ -2.42
USP9XQ93008 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC-0.07□□□□□ -2.42
USP9XQ93008 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC-0.07□□□□□ -2.42
USP9XQ93008 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC-0.07□□□□□ -2.42
USP9XQ93008 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC-0.07□□□□□ -2.42
USP9XQ93008 AC005832.3-201ENST00000537929 631 ntBASIC-0.07□□□□□ -2.42
USP9XQ93008 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC-0.07□□□□□ -2.42
USP9XQ93008 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC-0.07□□□□□ -2.42
USP9XQ93008 MED28P6-201ENST00000558776 231 ntBASIC-0.07□□□□□ -2.42
USP9XQ93008 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC-0.07□□□□□ -2.42
USP9XQ93008 AL022345.2-201ENST00000606307 135 ntBASIC-0.07□□□□□ -2.42
USP9XQ93008 Z99571.1-201ENST00000636677 394 ntBASIC-0.07□□□□□ -2.42
USP9XQ93008 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC-0.07□□□□□ -2.42
USP9XQ93008 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC-0.07□□□□□ -2.42
USP9XQ93008 SNORD33-201ENST00000362761 85 ntBASIC-0.07□□□□□ -2.42
USP9XQ93008 Y_RNA.533-201ENST00000384596 114 ntBASIC-0.07□□□□□ -2.42
USP9XQ93008 MIR19B1-201ENST00000384829 87 ntBASIC-0.07□□□□□ -2.42
USP9XQ93008 ATP6V0E1P1-201ENST00000412537 226 ntBASIC-0.07□□□□□ -2.42
USP9XQ93008 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC-0.07□□□□□ -2.42
USP9XQ93008 MTCO3P2-201ENST00000457365 171 ntBASIC-0.07□□□□□ -2.42
USP9XQ93008 RPS29P15-201ENST00000458329 171 ntBASIC-0.07□□□□□ -2.42
USP9XQ93008 RPL7P43-201ENST00000478876 753 ntBASIC-0.07□□□□□ -2.42
USP9XQ93008 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC-0.07□□□□□ -2.42
USP9XQ93008 SCARNA17-201ENST00000516183 144 ntBASIC-0.07□□□□□ -2.42
USP9XQ93008 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC-0.07□□□□□ -2.42
USP9XQ93008 MIR4324-201ENST00000584846 72 ntBASIC-0.07□□□□□ -2.42
USP9XQ93008 AC017083.3-201ENST00000609955 700 ntBASIC-0.07□□□□□ -2.42
USP9XQ93008 AC104465.1-201ENST00000611365 139 ntBASIC-0.07□□□□□ -2.42
USP9XQ93008 AC139769.3-201ENST00000618383 175 ntBASIC-0.07□□□□□ -2.42
USP9XQ93008 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.07□□□□□ -2.42
USP9XQ93008 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC-0.07□□□□□ -2.42
USP9XQ93008 RNU6-1216P-201ENST00000362590 107 ntBASIC-0.08□□□□□ -2.42
USP9XQ93008 RNU11-3P-201ENST00000391111 133 ntBASIC-0.08□□□□□ -2.42
USP9XQ93008 U6atac.2-201ENST00000408644 118 ntBASIC-0.08□□□□□ -2.42
USP9XQ93008 MTCO2P20-201ENST00000437339 673 ntBASIC-0.08□□□□□ -2.42
USP9XQ93008 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC-0.08□□□□□ -2.42
USP9XQ93008 AC147055.4-201ENST00000504399 745 ntBASIC-0.08□□□□□ -2.42
USP9XQ93008 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC-0.08□□□□□ -2.42
USP9XQ93008 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC-0.08□□□□□ -2.42
USP9XQ93008 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC-0.08□□□□□ -2.42
USP9XQ93008 IGJP1-201ENST00000522682 475 ntBASIC-0.08□□□□□ -2.42
USP9XQ93008 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC-0.08□□□□□ -2.42
USP9XQ93008 AC090888.2-201ENST00000559765 1144 ntBASIC-0.08□□□□□ -2.42
USP9XQ93008 AC008088.1-201ENST00000580993 280 ntBASIC-0.08□□□□□ -2.42
USP9XQ93008 MIR548AZ-201ENST00000616567 95 ntBASIC-0.08□□□□□ -2.42
USP9XQ93008 RNA5SP496-201ENST00000391240 109 ntBASIC-0.08□□□□□ -2.42
USP9XQ93008 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC-0.08□□□□□ -2.42
USP9XQ93008 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC-0.08□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms