Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 AC146507.2-201ENST00000460608 476 ntBASIC3.28□□□□□ -1.88
ATG4AQ8WYN0 AC091153.1-201ENST00000466297 402 ntBASIC3.28□□□□□ -1.88
ATG4AQ8WYN0 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.28□□□□□ -1.88
ATG4AQ8WYN0 RNU6-327P-201ENST00000516270 127 ntBASIC3.28□□□□□ -1.88
ATG4AQ8WYN0 SCARNA16.2-201ENST00000516520 172 ntBASIC3.28□□□□□ -1.88
ATG4AQ8WYN0 RNA5SP384-201ENST00000516615 116 ntBASIC3.28□□□□□ -1.88
ATG4AQ8WYN0 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3.28□□□□□ -1.88
ATG4AQ8WYN0 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.28□□□□□ -1.88
ATG4AQ8WYN0 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.28□□□□□ -1.88
ATG4AQ8WYN0 CPDP1-201ENST00000579660 283 ntBASIC3.28□□□□□ -1.88
ATG4AQ8WYN0 AC005899.2-201ENST00000584353 90 ntBASIC3.28□□□□□ -1.88
ATG4AQ8WYN0 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.28□□□□□ -1.88
ATG4AQ8WYN0 AC009314.1-201ENST00000603871 304 ntBASIC3.28□□□□□ -1.88
ATG4AQ8WYN0 AC016925.2-201ENST00000605108 242 ntBASIC3.28□□□□□ -1.88
ATG4AQ8WYN0 MIR8058-201ENST00000615737 89 ntBASIC3.28□□□□□ -1.88
ATG4AQ8WYN0 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
ATG4AQ8WYN0 SCARNA4-202ENST00000625402 129 ntBASIC3.28□□□□□ -1.88
ATG4AQ8WYN0 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
ATG4AQ8WYN0 AC093831.2-201ENST00000624393 3427 ntBASIC3.28□□□□□ -1.89
ATG4AQ8WYN0 Z83843.1-201ENST00000604070 3685 ntBASIC3.28□□□□□ -1.89
ATG4AQ8WYN0 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
ATG4AQ8WYN0 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.27□□□□□ -1.89
ATG4AQ8WYN0 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
ATG4AQ8WYN0 Y_RNA.5-201ENST00000362334 102 ntBASIC3.27□□□□□ -1.89
ATG4AQ8WYN0 Y_RNA.28-201ENST00000362554 111 ntBASIC3.27□□□□□ -1.89
ATG4AQ8WYN0 RNA5SP50-201ENST00000363731 107 ntBASIC3.27□□□□□ -1.89
ATG4AQ8WYN0 RNU6-884P-201ENST00000363889 107 ntBASIC3.27□□□□□ -1.89
ATG4AQ8WYN0 RNU6-596P-201ENST00000365395 98 ntBASIC3.27□□□□□ -1.89
ATG4AQ8WYN0 Z98749.2-208ENST00000381646 500 ntBASIC3.27□□□□□ -1.89
ATG4AQ8WYN0 RNU6-738P-201ENST00000384531 106 ntBASIC3.27□□□□□ -1.89
ATG4AQ8WYN0 RNU6-331P-201ENST00000384724 107 ntBASIC3.27□□□□□ -1.89
ATG4AQ8WYN0 RNA5SP171-201ENST00000391071 115 ntBASIC3.27□□□□□ -1.89
ATG4AQ8WYN0 RPS4XP3-201ENST00000398541 413 ntBASIC3.27□□□□□ -1.89
ATG4AQ8WYN0 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.27□□□□□ -1.89
ATG4AQ8WYN0 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC3.27□□□□□ -1.89
ATG4AQ8WYN0 RPS12P18-201ENST00000442381 270 ntBASIC3.27□□□□□ -1.89
ATG4AQ8WYN0 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
ATG4AQ8WYN0 AL035666.1-201ENST00000446195 348 ntBASIC3.27□□□□□ -1.89
ATG4AQ8WYN0 NIPA2P5-201ENST00000452282 464 ntBASIC3.27□□□□□ -1.89
ATG4AQ8WYN0 AC013470.1-201ENST00000453438 462 ntBASIC3.27□□□□□ -1.89
ATG4AQ8WYN0 AC008571.1-201ENST00000467232 300 ntBASIC3.27□□□□□ -1.89
ATG4AQ8WYN0 AP002884.2-201ENST00000471647 395 ntBASIC3.27□□□□□ -1.89
ATG4AQ8WYN0 HMGN1P10-201ENST00000474557 553 ntBASIC3.27□□□□□ -1.89
ATG4AQ8WYN0 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.27□□□□□ -1.89
ATG4AQ8WYN0 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.27□□□□□ -1.89
ATG4AQ8WYN0 RNU6-1045P-201ENST00000516321 107 ntBASIC3.27□□□□□ -1.89
ATG4AQ8WYN0 RNU6-988P-201ENST00000519081 107 ntBASIC3.27□□□□□ -1.89
ATG4AQ8WYN0 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.27□□□□□ -1.89
ATG4AQ8WYN0 AC012468.1-201ENST00000604888 430 ntBASIC3.27□□□□□ -1.89
ATG4AQ8WYN0 AC073657.2-201ENST00000605661 303 ntBASIC3.27□□□□□ -1.89
ATG4AQ8WYN0 AL355802.3-201ENST00000607571 545 ntBASIC3.27□□□□□ -1.89
ATG4AQ8WYN0 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.27□□□□□ -1.89
ATG4AQ8WYN0 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.27□□□□□ -1.89
ATG4AQ8WYN0 MTND5P30-201ENST00000452896 1731 ntBASIC3.27□□□□□ -1.89
ATG4AQ8WYN0 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
ATG4AQ8WYN0 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
ATG4AQ8WYN0 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.27□□□□□ -1.89
ATG4AQ8WYN0 ZNF826P-207ENST00000622273 1910 ntBASIC3.27□□□□□ -1.89
ATG4AQ8WYN0 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
ATG4AQ8WYN0 AC002546.1-201ENST00000588041 2504 ntBASIC3.26□□□□□ -1.89
ATG4AQ8WYN0 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
ATG4AQ8WYN0 RNU1-33P-201ENST00000364249 162 ntBASIC3.26□□□□□ -1.89
ATG4AQ8WYN0 RNU6-1317P-201ENST00000364582 104 ntBASIC3.26□□□□□ -1.89
ATG4AQ8WYN0 RNU5E-7P-201ENST00000365290 117 ntBASIC3.26□□□□□ -1.89
ATG4AQ8WYN0 Y_RNA.463-201ENST00000384271 102 ntBASIC3.26□□□□□ -1.89
ATG4AQ8WYN0 RNU6-1160P-201ENST00000384546 104 ntBASIC3.26□□□□□ -1.89
ATG4AQ8WYN0 SNORA1.3-201ENST00000384676 136 ntBASIC3.26□□□□□ -1.89
ATG4AQ8WYN0 AL513475.1-201ENST00000406602 315 ntBASIC3.26□□□□□ -1.89
ATG4AQ8WYN0 RNU6-174P-201ENST00000410406 106 ntBASIC3.26□□□□□ -1.89
ATG4AQ8WYN0 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
ATG4AQ8WYN0 AC006946.1-201ENST00000429106 328 ntBASIC3.26□□□□□ -1.89
ATG4AQ8WYN0 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC3.26□□□□□ -1.89
ATG4AQ8WYN0 UQCRHP3-201ENST00000451503 251 ntBASIC3.26□□□□□ -1.89
ATG4AQ8WYN0 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.26□□□□□ -1.89
ATG4AQ8WYN0 snoU109.2-201ENST00000459316 135 ntBASIC3.26□□□□□ -1.89
ATG4AQ8WYN0 U8.21-201ENST00000459536 136 ntBASIC3.26□□□□□ -1.89
ATG4AQ8WYN0 AC006445.2-201ENST00000510061 472 ntBASIC3.26□□□□□ -1.89
ATG4AQ8WYN0 RNU6-470P-201ENST00000515954 104 ntBASIC3.26□□□□□ -1.89
ATG4AQ8WYN0 ACA59.1-201ENST00000515966 143 ntBASIC3.26□□□□□ -1.89
ATG4AQ8WYN0 RNU6-928P-201ENST00000516876 104 ntBASIC3.26□□□□□ -1.89
ATG4AQ8WYN0 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.26□□□□□ -1.89
ATG4AQ8WYN0 AC004852.3-201ENST00000614131 326 ntBASIC3.26□□□□□ -1.89
ATG4AQ8WYN0 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.26□□□□□ -1.89
ATG4AQ8WYN0 MIR6075-201ENST00000620782 95 ntBASIC3.26□□□□□ -1.89
ATG4AQ8WYN0 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC3.26□□□□□ -1.89
ATG4AQ8WYN0 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
ATG4AQ8WYN0 AL161912.2-201ENST00000565707 3007 ntBASIC3.26□□□□□ -1.89
ATG4AQ8WYN0 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.25□□□□□ -1.89
ATG4AQ8WYN0 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
ATG4AQ8WYN0 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
ATG4AQ8WYN0 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
ATG4AQ8WYN0 RPL9P7-201ENST00000330965 580 ntBASIC3.25□□□□□ -1.89
ATG4AQ8WYN0 RNU6-490P-201ENST00000362985 107 ntBASIC3.25□□□□□ -1.89
ATG4AQ8WYN0 RNU6-270P-201ENST00000364131 105 ntBASIC3.25□□□□□ -1.89
ATG4AQ8WYN0 Y_RNA.252-201ENST00000364556 101 ntBASIC3.25□□□□□ -1.89
ATG4AQ8WYN0 SNORA63C-201ENST00000364578 129 ntBASIC3.25□□□□□ -1.89
ATG4AQ8WYN0 SNORA41-201ENST00000384675 132 ntBASIC3.25□□□□□ -1.89
ATG4AQ8WYN0 U3.37-201ENST00000408528 213 ntBASIC3.25□□□□□ -1.89
ATG4AQ8WYN0 AC243428.1-201ENST00000421099 264 ntBASIC3.25□□□□□ -1.89
ATG4AQ8WYN0 AC018865.2-201ENST00000423631 129 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms